RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 EID3Q8N140 333 aa16.72■□□□□ 0.27
CHMP2A-208ENST00000601220 KRT78Q8N1N4 520 aa16.72■□□□□ 0.27
CHMP2A-208ENST00000601220 RPRMLQ8N4K4 120 aa16.72■□□□□ 0.27
CHMP2A-208ENST00000601220 PSD4Q8NDX1 1056 aa16.72■□□□□ 0.27
CHMP2A-208ENST00000601220 CA5BP1Q8WTZ4 195 aa16.72■□□□□ 0.27
CHMP2A-208ENST00000601220 SERINC2Q96SA4 455 aa16.72■□□□□ 0.27
CHMP2A-208ENST00000601220 CAPS2Q9BXY5 557 aa16.72■□□□□ 0.27
CHMP2A-208ENST00000601220 REXO4Q9GZR2 422 aaKnown RBP16.72■□□□□ 0.27
CHMP2A-208ENST00000601220 TIMMDC1Q9NPL8 285 aa16.72■□□□□ 0.27
CHMP2A-208ENST00000601220 MYOTQ9UBF9 498 aa16.72■□□□□ 0.27
CHMP2A-208ENST00000601220 HIVEP1P15822 2718 aa16.72■□□□□ 0.27
CHMP2A-208ENST00000601220 GTF3C1Q12789 2109 aa16.72■□□□□ 0.27
CHMP2A-208ENST00000601220 CXorf49A8MYA2 514 aaPredicted RBP16.71■□□□□ 0.27
CHMP2A-208ENST00000601220 PDE9AO76083 593 aa16.71■□□□□ 0.27
CHMP2A-208ENST00000601220 OR6B1O95007 311 aa16.71■□□□□ 0.27
CHMP2A-208ENST00000601220 CAPN3P20807 821 aa16.71■□□□□ 0.27
CHMP2A-208ENST00000601220 CERS1P27544 350 aa16.71■□□□□ 0.27
CHMP2A-208ENST00000601220 POU4F1Q01851 419 aa16.71■□□□□ 0.27
CHMP2A-208ENST00000601220 ELAVL1Q15717 326 aaKnown RBP16.71■□□□□ 0.27
CHMP2A-208ENST00000601220 FBXO48Q5FWF7 155 aa16.71■□□□□ 0.27
CHMP2A-208ENST00000601220 CDKL4Q5MAI5 379 aa16.71■□□□□ 0.27
CHMP2A-208ENST00000601220 CEP128Q6ZU80 1094 aa16.71■□□□□ 0.27
CHMP2A-208ENST00000601220 FRA10AC1Q70Z53 315 aa16.71■□□□□ 0.27
CHMP2A-208ENST00000601220 CLNKQ7Z7G1 428 aa16.71■□□□□ 0.27
CHMP2A-208ENST00000601220 GPALPP1Q8IXQ4 340 aa16.71■□□□□ 0.27
CHMP2A-208ENST00000601220 ZNF321PQ8N8H1 164 aa16.71■□□□□ 0.27
CHMP2A-208ENST00000601220 LILRB4Q8NHJ6 448 aa16.71■□□□□ 0.27
CHMP2A-208ENST00000601220 CCT6BQ92526 530 aa16.71■□□□□ 0.27
CHMP2A-208ENST00000601220 ESAMQ96AP7 390 aa16.71■□□□□ 0.27
CHMP2A-208ENST00000601220 RUNDC3BQ96NL0 473 aa16.71■□□□□ 0.27
CHMP2A-208ENST00000601220 ZDHHC11Q9H8X9 412 aa16.71■□□□□ 0.27
CHMP2A-208ENST00000601220 CAB39LQ9H9S4 337 aa16.71■□□□□ 0.27
CHMP2A-208ENST00000601220 MCCC2Q9HCC0 563 aa16.71■□□□□ 0.27
CHMP2A-208ENST00000601220 NPDC1Q9NQX5 325 aaPredicted RBP16.71■□□□□ 0.27
CHMP2A-208ENST00000601220 DNAJC11Q9NVH1 559 aa16.71■□□□□ 0.27
CHMP2A-208ENST00000601220 VTI1BQ9UEU0 232 aa16.71■□□□□ 0.27
CHMP2A-208ENST00000601220 CACNA1CQ13936 2221 aa16.7■□□□□ 0.26
CHMP2A-208ENST00000601220 A0A0G2JMM0 328 aa16.7■□□□□ 0.26
CHMP2A-208ENST00000601220 MYOCOSA0A1B0GUC4 107 aa16.7■□□□□ 0.26
CHMP2A-208ENST00000601220 A0A1W2PPB8 328 aa16.7■□□□□ 0.26
CHMP2A-208ENST00000601220 A0A1W2PRS3 328 aa16.7■□□□□ 0.26
CHMP2A-208ENST00000601220 USP27XA6NNY8 438 aa16.7■□□□□ 0.26
CHMP2A-208ENST00000601220 KIR3DP1A8MWS1 328 aa16.7■□□□□ 0.26
CHMP2A-208ENST00000601220 CDC40O60508 579 aaKnown RBP eCLIP16.7■□□□□ 0.26
CHMP2A-208ENST00000601220 ZNF354AO60765 605 aaPredicted RBP16.7■□□□□ 0.26
CHMP2A-208ENST00000601220 GLSO94925 669 aaPredicted RBP16.7■□□□□ 0.26
CHMP2A-208ENST00000601220 TUBB4AP04350 444 aa16.7■□□□□ 0.26
CHMP2A-208ENST00000601220 CD1DP15813 335 aa16.7■□□□□ 0.26
CHMP2A-208ENST00000601220 RPL21P46778 160 aaKnown RBP16.7■□□□□ 0.26
CHMP2A-208ENST00000601220 KCNC1P48547 511 aa16.7■□□□□ 0.26
CHMP2A-208ENST00000601220 MTTPP55157 894 aa16.7■□□□□ 0.26
CHMP2A-208ENST00000601220 TLE4Q04727 773 aa16.7■□□□□ 0.26
CHMP2A-208ENST00000601220 DOC2AQ14183 400 aa16.7■□□□□ 0.26
CHMP2A-208ENST00000601220 E2F2Q14209 437 aa16.7■□□□□ 0.26
CHMP2A-208ENST00000601220 OR4D1Q15615 310 aa16.7■□□□□ 0.26
CHMP2A-208ENST00000601220 ARHGAP11AQ6P4F7 1023 aa16.7■□□□□ 0.26
CHMP2A-208ENST00000601220 MEX3BQ6ZN04 569 aaKnown RBP16.7■□□□□ 0.26
CHMP2A-208ENST00000601220 ZNF793Q6ZN11 406 aa16.7■□□□□ 0.26
CHMP2A-208ENST00000601220 TMEM132CQ8N3T6 1108 aa16.7■□□□□ 0.26
CHMP2A-208ENST00000601220 OR2M7Q8NG81 312 aa16.7■□□□□ 0.26
CHMP2A-208ENST00000601220 F2RL3Q96RI0 385 aa16.7■□□□□ 0.26
CHMP2A-208ENST00000601220 RASL10BQ96S79 203 aa16.7■□□□□ 0.26
CHMP2A-208ENST00000601220 CCDC77Q9BR77 488 aa16.7■□□□□ 0.26
CHMP2A-208ENST00000601220 ALOXE3Q9BYJ1 711 aa16.7■□□□□ 0.26
CHMP2A-208ENST00000601220 TRIM31Q9BZY9 425 aa16.7■□□□□ 0.26
CHMP2A-208ENST00000601220 DEFB127Q9H1M4 99 aa16.7■□□□□ 0.26
CHMP2A-208ENST00000601220 NSMCE4AQ9NXX6 385 aa16.7■□□□□ 0.26
CHMP2A-208ENST00000601220 COQ3Q9NZJ6 369 aa16.7■□□□□ 0.26
CHMP2A-208ENST00000601220 PTBP2Q9UKA9 531 aaKnown RBP16.7■□□□□ 0.26
CHMP2A-208ENST00000601220 ITGB1BP2Q9UKP3 347 aa16.7■□□□□ 0.26
CHMP2A-208ENST00000601220 RNF6Q9Y252 685 aa16.7■□□□□ 0.26
CHMP2A-208ENST00000601220 MRPS33Q9Y291 106 aaKnown RBP16.7■□□□□ 0.26
CHMP2A-208ENST00000601220 CELSR1Q9NYQ6 3014 aa16.7■□□□□ 0.26
CHMP2A-208ENST00000601220 A0A088AWK7 358 aa16.69■□□□□ 0.26
CHMP2A-208ENST00000601220 ANKDD1BA6NHY2 528 aa16.69■□□□□ 0.26
CHMP2A-208ENST00000601220 A8MVJ9 347 aa16.69■□□□□ 0.26
CHMP2A-208ENST00000601220 WWP2O00308 870 aa16.69■□□□□ 0.26
CHMP2A-208ENST00000601220 STK16O75716 305 aa16.69■□□□□ 0.26
CHMP2A-208ENST00000601220 TOXO94900 526 aa16.69■□□□□ 0.26
CHMP2A-208ENST00000601220 C1QAP02745 245 aa16.69■□□□□ 0.26
CHMP2A-208ENST00000601220 CCDC166P0CW27 439 aa16.69■□□□□ 0.26
CHMP2A-208ENST00000601220 ZNF10P21506 573 aaPredicted RBP16.69■□□□□ 0.26
CHMP2A-208ENST00000601220 SOX3P41225 446 aa16.69■□□□□ 0.26
CHMP2A-208ENST00000601220 HSPA7P48741 367 aa16.69■□□□□ 0.26
CHMP2A-208ENST00000601220 HK2P52789 917 aa16.69■□□□□ 0.26
CHMP2A-208ENST00000601220 PPIAP62937 165 aaKnown RBP16.69■□□□□ 0.26
CHMP2A-208ENST00000601220 TMEM211Q6ICI0 200 aa16.69■□□□□ 0.26
CHMP2A-208ENST00000601220 SULT1C3Q6IMI6 304 aa16.69■□□□□ 0.26
CHMP2A-208ENST00000601220 TRIM40Q6P9F5 258 aa16.69■□□□□ 0.26
CHMP2A-208ENST00000601220 IL20RBQ6UXL0 311 aa16.69■□□□□ 0.26
CHMP2A-208ENST00000601220 HSDL2Q6YN16 418 aa16.69■□□□□ 0.26
CHMP2A-208ENST00000601220 GPSM1Q86YR5 675 aa16.69■□□□□ 0.26
CHMP2A-208ENST00000601220 ZBED8Q8IZ13 594 aa16.69■□□□□ 0.26
CHMP2A-208ENST00000601220 TCAIMQ8N3R3 496 aa16.69■□□□□ 0.26
CHMP2A-208ENST00000601220 MORN4Q8NDC4 146 aa16.69■□□□□ 0.26
CHMP2A-208ENST00000601220 PTCD3Q96EY7 689 aaKnown RBP16.69■□□□□ 0.26
CHMP2A-208ENST00000601220 UBXN10Q96LJ8 280 aa16.69■□□□□ 0.26
CHMP2A-208ENST00000601220 UCK2Q9BZX2 261 aa16.69■□□□□ 0.26
CHMP2A-208ENST00000601220 TP63Q9H3D4 680 aaPredicted RBP16.69■□□□□ 0.26
CHMP2A-208ENST00000601220 HPF1Q9NWY4 346 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms