RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 CRABP2P29373 138 aa12.88□□□□□ -0.35
SCAF1-203ENST00000598359 IRF8Q02556 426 aa12.88□□□□□ -0.35
SCAF1-203ENST00000598359 CHIT1Q13231 466 aa12.88□□□□□ -0.35
SCAF1-203ENST00000598359 SLC29A2Q14542 456 aa12.88□□□□□ -0.35
SCAF1-203ENST00000598359 MEP1AQ16819 746 aa12.88□□□□□ -0.35
SCAF1-203ENST00000598359 TNFAIP8L3Q5GJ75 292 aa12.88□□□□□ -0.35
SCAF1-203ENST00000598359 CDKL4Q5MAI5 379 aa12.88□□□□□ -0.35
SCAF1-203ENST00000598359 ZNF468Q5VIY5 522 aaPredicted RBP12.88□□□□□ -0.35
SCAF1-203ENST00000598359 C1QL3Q5VWW1 255 aa12.88□□□□□ -0.35
SCAF1-203ENST00000598359 SPINK14Q6IE38 97 aa12.88□□□□□ -0.35
SCAF1-203ENST00000598359 NIPAL1Q6NVV3 410 aa12.88□□□□□ -0.35
SCAF1-203ENST00000598359 CLNKQ7Z7G1 428 aa12.88□□□□□ -0.35
SCAF1-203ENST00000598359 CENPLQ8N0S6 344 aaPredicted RBP12.88□□□□□ -0.35
SCAF1-203ENST00000598359 RNF175Q8N4F7 328 aa12.88□□□□□ -0.35
SCAF1-203ENST00000598359 NFAM1Q8NET5 270 aaPredicted RBP12.88□□□□□ -0.35
SCAF1-203ENST00000598359 TTLQ8NG68 377 aa12.88□□□□□ -0.35
SCAF1-203ENST00000598359 STAG3L4Q8TBR4 150 aa12.88□□□□□ -0.35
SCAF1-203ENST00000598359 ELP5Q8TE02 316 aa12.88□□□□□ -0.35
SCAF1-203ENST00000598359 SREK1Q8WXA9 508 aaKnown RBP12.88□□□□□ -0.35
SCAF1-203ENST00000598359 NR4A3Q92570 626 aa12.88□□□□□ -0.35
SCAF1-203ENST00000598359 PTCD3Q96EY7 689 aaKnown RBP12.88□□□□□ -0.35
SCAF1-203ENST00000598359 CSF3RQ99062 836 aa12.88□□□□□ -0.35
SCAF1-203ENST00000598359 UTP23Q9BRU9 249 aaKnown RBP12.88□□□□□ -0.35
SCAF1-203ENST00000598359 CAPS2Q9BXY5 557 aa12.88□□□□□ -0.35
SCAF1-203ENST00000598359 ROPN1BQ9BZX4 212 aaPredicted RBP12.88□□□□□ -0.35
SCAF1-203ENST00000598359 REXO4Q9GZR2 422 aaKnown RBP12.88□□□□□ -0.35
SCAF1-203ENST00000598359 EHD1Q9H4M9 534 aa12.88□□□□□ -0.35
SCAF1-203ENST00000598359 NT5DC2Q9H857 520 aa12.88□□□□□ -0.35
SCAF1-203ENST00000598359 ROPN1Q9HAT0 212 aaPredicted RBP12.88□□□□□ -0.35
SCAF1-203ENST00000598359 NMRAL1Q9HBL8 299 aa12.88□□□□□ -0.35
SCAF1-203ENST00000598359 PRM3Q9NNZ6 103 aa12.88□□□□□ -0.35
SCAF1-203ENST00000598359 NUDT4Q9NZJ9 180 aa12.88□□□□□ -0.35
SCAF1-203ENST00000598359 COPG2Q9UBF2 871 aa12.88□□□□□ -0.35
SCAF1-203ENST00000598359 POLQO75417 2590 aa12.88□□□□□ -0.35
SCAF1-203ENST00000598359 RTCAO00442 366 aaKnown RBP12.87□□□□□ -0.35
SCAF1-203ENST00000598359 B3GALT2O43825 422 aa12.87□□□□□ -0.35
SCAF1-203ENST00000598359 KERAO60938 352 aa12.87□□□□□ -0.35
SCAF1-203ENST00000598359 C2P06681 752 aa12.87□□□□□ -0.35
SCAF1-203ENST00000598359 PCNAP12004 261 aa12.87□□□□□ -0.35
SCAF1-203ENST00000598359 MSH2P43246 934 aa12.87□□□□□ -0.35
SCAF1-203ENST00000598359 RIPPLY3P57055 190 aa12.87□□□□□ -0.35
SCAF1-203ENST00000598359 TAS2R50P59544 299 aa12.87□□□□□ -0.35
SCAF1-203ENST00000598359 OC90Q02509 493 aaPredicted RBP12.87□□□□□ -0.35
SCAF1-203ENST00000598359 NAB1Q13506 487 aa12.87□□□□□ -0.35
SCAF1-203ENST00000598359 OR1C1Q15619 314 aa12.87□□□□□ -0.35
SCAF1-203ENST00000598359 ADPRMQ3LIE5 342 aa12.87□□□□□ -0.35
SCAF1-203ENST00000598359 KRT71Q3SY84 523 aa12.87□□□□□ -0.35
SCAF1-203ENST00000598359 ABHD17CQ6PCB6 329 aa12.87□□□□□ -0.35
SCAF1-203ENST00000598359 LRRC70Q7Z2Q7 622 aa12.87□□□□□ -0.35
SCAF1-203ENST00000598359 RPS19BP1Q86WX3 136 aaKnown RBP12.87□□□□□ -0.35
SCAF1-203ENST00000598359 SLC5A8Q8N695 610 aa12.87□□□□□ -0.35
SCAF1-203ENST00000598359 ARFGAP2Q8N6H7 521 aa12.87□□□□□ -0.35
SCAF1-203ENST00000598359 MDS2Q8NDY4 140 aa12.87□□□□□ -0.35
SCAF1-203ENST00000598359 OR2L5Q8NG80 312 aa12.87□□□□□ -0.35
SCAF1-203ENST00000598359 THAP3Q8WTV1 239 aaPredicted RBP12.87□□□□□ -0.35
SCAF1-203ENST00000598359 WDR34Q96EX3 536 aa12.87□□□□□ -0.35
SCAF1-203ENST00000598359 EFCAB11Q9BUY7 163 aa12.87□□□□□ -0.35
SCAF1-203ENST00000598359 TSPAN10Q9H1Z9 355 aaPredicted RBP12.87□□□□□ -0.35
SCAF1-203ENST00000598359 CLK4Q9HAZ1 481 aaKnown RBP12.87□□□□□ -0.35
SCAF1-203ENST00000598359 PRTFDC1Q9NRG1 225 aa12.87□□□□□ -0.35
SCAF1-203ENST00000598359 SNX15Q9NRS6 342 aa12.87□□□□□ -0.35
SCAF1-203ENST00000598359 PNO1Q9NRX1 252 aaKnown RBP12.87□□□□□ -0.35
SCAF1-203ENST00000598359 ABI3Q9P2A4 366 aa12.87□□□□□ -0.35
SCAF1-203ENST00000598359 ACOT9Q9Y305 439 aa12.87□□□□□ -0.35
SCAF1-203ENST00000598359 SVILO95425 2214 aa12.86□□□□□ -0.35
SCAF1-203ENST00000598359 K7EPI3 171 aa12.86□□□□□ -0.35
SCAF1-203ENST00000598359 SAP18O00422 153 aaKnown RBP12.86□□□□□ -0.35
SCAF1-203ENST00000598359 MYO1DO94832 1006 aa12.86□□□□□ -0.35
SCAF1-203ENST00000598359 UNC5CO95185 931 aa12.86□□□□□ -0.35
SCAF1-203ENST00000598359 SHBGP04278 402 aa12.86□□□□□ -0.35
SCAF1-203ENST00000598359 MTHFD2P13995 350 aa12.86□□□□□ -0.35
SCAF1-203ENST00000598359 TPP2P29144 1249 aaPredicted RBP12.86□□□□□ -0.35
SCAF1-203ENST00000598359 LIM2P55344 173 aa12.86□□□□□ -0.35
SCAF1-203ENST00000598359 RAB38P57729 211 aa12.86□□□□□ -0.35
SCAF1-203ENST00000598359 IFFO1Q0D2I5 559 aa12.86□□□□□ -0.35
SCAF1-203ENST00000598359 SLC13A2Q13183 592 aa12.86□□□□□ -0.35
SCAF1-203ENST00000598359 INAQ16352 499 aa12.86□□□□□ -0.35
SCAF1-203ENST00000598359 TRIM40Q6P9F5 258 aa12.86□□□□□ -0.35
SCAF1-203ENST00000598359 GFRALQ6UXV0 394 aa12.86□□□□□ -0.35
SCAF1-203ENST00000598359 ZNF793Q6ZN11 406 aa12.86□□□□□ -0.35
SCAF1-203ENST00000598359 UBE3DQ7Z6J8 389 aa12.86□□□□□ -0.35
SCAF1-203ENST00000598359 FJX1Q86VR8 437 aa12.86□□□□□ -0.35
SCAF1-203ENST00000598359 SCUBE1Q8IWY4 988 aa12.86□□□□□ -0.35
SCAF1-203ENST00000598359 TEX9Q8N6V9 391 aa12.86□□□□□ -0.35
SCAF1-203ENST00000598359 UHMK1Q8TAS1 419 aaKnown RBP12.86□□□□□ -0.35
SCAF1-203ENST00000598359 UBTD2Q8WUN7 234 aa12.86□□□□□ -0.35
SCAF1-203ENST00000598359 SORBS1Q9BX66 1292 aaKnown RBP12.86□□□□□ -0.35
SCAF1-203ENST00000598359 PITHD1Q9GZP4 211 aaPredicted RBP12.86□□□□□ -0.35
SCAF1-203ENST00000598359 COPS7BQ9H9Q2 264 aaPredicted RBP12.86□□□□□ -0.35
SCAF1-203ENST00000598359 PRDM7Q9NQW5 492 aa12.86□□□□□ -0.35
SCAF1-203ENST00000598359 OPTCQ9UBM4 332 aa12.86□□□□□ -0.35
SCAF1-203ENST00000598359 CLDN16Q9Y5I7 305 aa12.86□□□□□ -0.35
SCAF1-203ENST00000598359 ITPR3Q14573 2671 aa12.86□□□□□ -0.35
SCAF1-203ENST00000598359 CROCCQ5TZA2 2017 aa12.86□□□□□ -0.35
SCAF1-203ENST00000598359 POLEQ07864 2286 aa12.86□□□□□ -0.35
SCAF1-203ENST00000598359 CSMD1Q96PZ7 3565 aa12.85□□□□□ -0.35
SCAF1-203ENST00000598359 A0A087X1B8 175 aa12.85□□□□□ -0.35
SCAF1-203ENST00000598359 A0A096LPK6 155 aa12.85□□□□□ -0.35
SCAF1-203ENST00000598359 TRBV11-1A0A0K0K1C0 115 aa12.85□□□□□ -0.35
SCAF1-203ENST00000598359 CYR61O00622 381 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms