RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 KDM1AO60341 852 aa16.2■□□□□ 0.18
SHKBP1-216ENST00000598201 SEMG1P04279 462 aa16.2■□□□□ 0.18
SHKBP1-216ENST00000598201 ALPLP05186 524 aa16.2■□□□□ 0.18
SHKBP1-216ENST00000598201 PCGF2P35227 344 aa16.2■□□□□ 0.18
SHKBP1-216ENST00000598201 SOAT1P35610 550 aa16.2■□□□□ 0.18
SHKBP1-216ENST00000598201 SSR2P43308 183 aa16.2■□□□□ 0.18
SHKBP1-216ENST00000598201 RABIFP47224 123 aa16.2■□□□□ 0.18
SHKBP1-216ENST00000598201 HEPACAMQ14CZ8 416 aa16.2■□□□□ 0.18
SHKBP1-216ENST00000598201 PRRT3Q5FWE3 981 aa16.2■□□□□ 0.18
SHKBP1-216ENST00000598201 ANKRD34AQ69YU3 496 aa16.2■□□□□ 0.18
SHKBP1-216ENST00000598201 CBLL1Q75N03 491 aa16.2■□□□□ 0.18
SHKBP1-216ENST00000598201 RNF130Q86XS8 419 aa16.2■□□□□ 0.18
SHKBP1-216ENST00000598201 ZDHHC21Q8IVQ6 265 aa16.2■□□□□ 0.18
SHKBP1-216ENST00000598201 TRIML2Q8N7C3 387 aa16.2■□□□□ 0.18
SHKBP1-216ENST00000598201 TMEM105Q8N8V8 129 aa16.2■□□□□ 0.18
SHKBP1-216ENST00000598201 FLVCR1-AS1Q8TAF5 88 aa16.2■□□□□ 0.18
SHKBP1-216ENST00000598201 MS4A6EQ96DS6 147 aa16.2■□□□□ 0.18
SHKBP1-216ENST00000598201 SARGQ9BW04 601 aa16.2■□□□□ 0.18
SHKBP1-216ENST00000598201 VNN3Q9NY84 501 aa16.2■□□□□ 0.18
SHKBP1-216ENST00000598201 WSB2Q9NYS7 404 aaPredicted RBP16.2■□□□□ 0.18
SHKBP1-216ENST00000598201 ABCG2Q9UNQ0 655 aa16.2■□□□□ 0.18
SHKBP1-216ENST00000598201 WBP11Q9Y2W2 641 aaKnown RBP16.2■□□□□ 0.18
SHKBP1-216ENST00000598201 MAP4K5Q9Y4K4 846 aa16.2■□□□□ 0.18
SHKBP1-216ENST00000598201 PCDHGA4Q9Y5G9 962 aa16.2■□□□□ 0.18
SHKBP1-216ENST00000598201 ARHGEF17Q96PE2 2063 aaPredicted RBP16.2■□□□□ 0.18
SHKBP1-216ENST00000598201 FANCMQ8IYD8 2048 aa16.2■□□□□ 0.18
SHKBP1-216ENST00000598201 WASHC1A8K0Z3 465 aa16.2■□□□□ 0.18
SHKBP1-216ENST00000598201 TMEM229AB2RXF0 380 aa16.2■□□□□ 0.18
SHKBP1-216ENST00000598201 GNGT2O14610 69 aa16.2■□□□□ 0.18
SHKBP1-216ENST00000598201 TBX19O60806 448 aa16.2■□□□□ 0.18
SHKBP1-216ENST00000598201 CELA2BP08218 269 aaPredicted RBP16.2■□□□□ 0.18
SHKBP1-216ENST00000598201 ALDH3A2P51648 485 aa16.2■□□□□ 0.18
SHKBP1-216ENST00000598201 DAG1Q14118 895 aa16.2■□□□□ 0.18
SHKBP1-216ENST00000598201 ADPRMQ3LIE5 342 aa16.2■□□□□ 0.18
SHKBP1-216ENST00000598201 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.2■□□□□ 0.18
SHKBP1-216ENST00000598201 EIF3MQ7L2H7 374 aaKnown RBP16.2■□□□□ 0.18
SHKBP1-216ENST00000598201 TRIM73Q86UV7 250 aa16.2■□□□□ 0.18
SHKBP1-216ENST00000598201 ZDHHC13Q8IUH4 622 aa16.2■□□□□ 0.18
SHKBP1-216ENST00000598201 EXOSC8Q96B26 276 aaKnown RBP16.2■□□□□ 0.18
SHKBP1-216ENST00000598201 HSH2DQ96JZ2 352 aa16.2■□□□□ 0.18
SHKBP1-216ENST00000598201 FCRL4Q96PJ5 515 aa16.2■□□□□ 0.18
SHKBP1-216ENST00000598201 EPS8L2Q9H6S3 715 aa16.2■□□□□ 0.18
SHKBP1-216ENST00000598201 SMURF2Q9HAU4 748 aa16.2■□□□□ 0.18
SHKBP1-216ENST00000598201 C1GALT1Q9NS00 363 aa16.2■□□□□ 0.18
SHKBP1-216ENST00000598201 ERI3O43414 337 aaKnown RBP16.19■□□□□ 0.18
SHKBP1-216ENST00000598201 PGM3O95394 542 aa16.19■□□□□ 0.18
SHKBP1-216ENST00000598201 MYF6P23409 242 aa16.19■□□□□ 0.18
SHKBP1-216ENST00000598201 AHRP35869 848 aa16.19■□□□□ 0.18
SHKBP1-216ENST00000598201 CHI3L1P36222 383 aaPredicted RBP16.19■□□□□ 0.18
SHKBP1-216ENST00000598201 PCBP4P57723 403 aaKnown RBP16.19■□□□□ 0.18
SHKBP1-216ENST00000598201 EIF2B5Q13144 721 aaKnown RBP16.19■□□□□ 0.18
SHKBP1-216ENST00000598201 TMEM35AQ53FP2 167 aa16.19■□□□□ 0.18
SHKBP1-216ENST00000598201 KRT80Q6KB66 452 aa16.19■□□□□ 0.18
SHKBP1-216ENST00000598201 PAQR7Q86WK9 346 aa16.19■□□□□ 0.18
SHKBP1-216ENST00000598201 C11orf65Q8NCR3 313 aa16.19■□□□□ 0.18
SHKBP1-216ENST00000598201 RNF217Q8TC41 542 aa16.19■□□□□ 0.18
SHKBP1-216ENST00000598201 POP5Q969H6 163 aaKnown RBP16.19■□□□□ 0.18
SHKBP1-216ENST00000598201 ASPSCR1Q9BZE9 553 aa16.19■□□□□ 0.18
SHKBP1-216ENST00000598201 TPSD1Q9BZJ3 242 aa16.19■□□□□ 0.18
SHKBP1-216ENST00000598201 IL1RAPQ9NPH3 570 aa16.19■□□□□ 0.18
SHKBP1-216ENST00000598201 RPS6KA6Q9UK32 745 aa16.19■□□□□ 0.18
SHKBP1-216ENST00000598201 SNX7Q9UNH6 387 aa16.19■□□□□ 0.18
SHKBP1-216ENST00000598201 SNX8Q9Y5X2 465 aa16.19■□□□□ 0.18
SHKBP1-216ENST00000598201 U3KQV3 271 aa16.19■□□□□ 0.18
SHKBP1-216ENST00000598201 ZDBF2Q9HCK1 2354 aa16.19■□□□□ 0.18
SHKBP1-216ENST00000598201 hCG_2039718K7EN88 272 aa16.18■□□□□ 0.18
SHKBP1-216ENST00000598201 PDPK1O15530 556 aa16.18■□□□□ 0.18
SHKBP1-216ENST00000598201 PRKRAO75569 313 aaKnown RBP16.18■□□□□ 0.18
SHKBP1-216ENST00000598201 CAPGP40121 348 aa16.18■□□□□ 0.18
SHKBP1-216ENST00000598201 DCTP40126 519 aa16.18■□□□□ 0.18
SHKBP1-216ENST00000598201 VLDLRP98155 873 aa16.18■□□□□ 0.18
SHKBP1-216ENST00000598201 ILF3Q12906 894 aaKnown RBP eCLIP16.18■□□□□ 0.18
SHKBP1-216ENST00000598201 GPR18Q14330 331 aa16.18■□□□□ 0.18
SHKBP1-216ENST00000598201 ZIK1Q3SY52 487 aaPredicted RBP16.18■□□□□ 0.18
SHKBP1-216ENST00000598201 TOR1AIP1Q5JTV8 583 aa16.18■□□□□ 0.18
SHKBP1-216ENST00000598201 GCNT6Q5T4J0 391 aa16.18■□□□□ 0.18
SHKBP1-216ENST00000598201 ABHD17CQ6PCB6 329 aa16.18■□□□□ 0.18
SHKBP1-216ENST00000598201 SPESP1Q6UW49 350 aa16.18■□□□□ 0.18
SHKBP1-216ENST00000598201 MAMSTRQ6ZN01 415 aa16.18■□□□□ 0.18
SHKBP1-216ENST00000598201 DHRSXQ8N5I4 330 aa16.18■□□□□ 0.18
SHKBP1-216ENST00000598201 MFSD9Q8NBP5 474 aa16.18■□□□□ 0.18
SHKBP1-216ENST00000598201 OR8K5Q8NH50 307 aa16.18■□□□□ 0.18
SHKBP1-216ENST00000598201 GPBAR1Q8TDU6 330 aa16.18■□□□□ 0.18
SHKBP1-216ENST00000598201 ORAI3Q9BRQ5 295 aa16.18■□□□□ 0.18
SHKBP1-216ENST00000598201 PRDM7Q9NQW5 492 aa16.18■□□□□ 0.18
SHKBP1-216ENST00000598201 APOBEC3BQ9UH17 382 aaKnown RBP16.18■□□□□ 0.18
SHKBP1-216ENST00000598201 MDC1Q14676 2089 aaKnown RBP16.18■□□□□ 0.18
SHKBP1-216ENST00000598201 DIRAS1O95057 198 aa16.18■□□□□ 0.18
SHKBP1-216ENST00000598201 TNFP01375 233 aa16.18■□□□□ 0.18
SHKBP1-216ENST00000598201 PRKACGP22612 351 aa16.18■□□□□ 0.18
SHKBP1-216ENST00000598201 CD6P30203 668 aa16.18■□□□□ 0.18
SHKBP1-216ENST00000598201 AVPR2P30518 371 aa16.18■□□□□ 0.18
SHKBP1-216ENST00000598201 FRKP42685 505 aaPredicted RBP16.18■□□□□ 0.18
SHKBP1-216ENST00000598201 CXCL12P48061 93 aa16.18■□□□□ 0.18
SHKBP1-216ENST00000598201 MANFP55145 182 aaKnown RBP16.18■□□□□ 0.18
SHKBP1-216ENST00000598201 ADARB1P78563 741 aaKnown RBP16.18■□□□□ 0.18
SHKBP1-216ENST00000598201 FZD2Q14332 565 aa16.18■□□□□ 0.18
SHKBP1-216ENST00000598201 PLCL1Q15111 1095 aa16.18■□□□□ 0.18
SHKBP1-216ENST00000598201 NDUFAF5Q5TEU4 345 aa16.18■□□□□ 0.18
SHKBP1-216ENST00000598201 TSTD1Q8NFU3 115 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms