RNA–Protein interactions for RNA: ENST00000596457.1

LIG1-211, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-211ENST00000596457 NPLQ9BXD5 320 aaPredicted RBP10.44□□□□□ -0.74
LIG1-211ENST00000596457 ROGDIQ9GZN7 287 aa10.44□□□□□ -0.74
LIG1-211ENST00000596457 SLC25A18Q9H1K4 315 aa10.44□□□□□ -0.74
LIG1-211ENST00000596457 GSTO2Q9H4Y5 243 aa10.44□□□□□ -0.74
LIG1-211ENST00000596457 KCNK9Q9NPC2 374 aa10.44□□□□□ -0.74
LIG1-211ENST00000596457 LANCL2Q9NS86 450 aa10.44□□□□□ -0.74
LIG1-211ENST00000596457 OXSMQ9NWU1 459 aa10.44□□□□□ -0.74
LIG1-211ENST00000596457 C19orf25Q9UFG5 118 aaPredicted RBP10.44□□□□□ -0.74
LIG1-211ENST00000596457 TRPS1Q9UHF7 1281 aa10.44□□□□□ -0.74
LIG1-211ENST00000596457 ZNF225Q9UK10 706 aa10.44□□□□□ -0.74
LIG1-211ENST00000596457 SNX6Q9UNH7 406 aa10.44□□□□□ -0.74
LIG1-211ENST00000596457 SLC12A4Q9UP95 1085 aa10.44□□□□□ -0.74
LIG1-211ENST00000596457 TP53TG5Q9Y2B4 290 aa10.44□□□□□ -0.74
LIG1-211ENST00000596457 TIMM22Q9Y584 194 aa10.44□□□□□ -0.74
LIG1-211ENST00000596457 IGHV1-45A0A0A0MS14 117 aa10.43□□□□□ -0.74
LIG1-211ENST00000596457 WDR91A4D1P6 747 aa10.43□□□□□ -0.74
LIG1-211ENST00000596457 MANBAO00462 879 aa10.43□□□□□ -0.74
LIG1-211ENST00000596457 PLPP1O14494 284 aa10.43□□□□□ -0.74
LIG1-211ENST00000596457 TRIM13O60858 407 aa10.43□□□□□ -0.74
LIG1-211ENST00000596457 SEC24DO94855 1032 aaPredicted RBP10.43□□□□□ -0.74
LIG1-211ENST00000596457 ETHE1O95571 254 aa10.43□□□□□ -0.74
LIG1-211ENST00000596457 MLYCDO95822 493 aa10.43□□□□□ -0.74
LIG1-211ENST00000596457 HPP00738 406 aa10.43□□□□□ -0.74
LIG1-211ENST00000596457 GBAP04062 536 aa10.43□□□□□ -0.74
LIG1-211ENST00000596457 CELA2AP08217 269 aa10.43□□□□□ -0.74
LIG1-211ENST00000596457 COX6A1P12074 109 aa10.43□□□□□ -0.74
LIG1-211ENST00000596457 MAOAP21397 527 aa10.43□□□□□ -0.74
LIG1-211ENST00000596457 CPN2P22792 545 aa10.43□□□□□ -0.74
LIG1-211ENST00000596457 LIM2P55344 173 aa10.43□□□□□ -0.74
LIG1-211ENST00000596457 DNAJB13P59910 316 aa10.43□□□□□ -0.74
LIG1-211ENST00000596457 RHAGQ02094 409 aa10.43□□□□□ -0.74
LIG1-211ENST00000596457 AIMP2Q13155 320 aaKnown RBP10.43□□□□□ -0.74
LIG1-211ENST00000596457 PCLAFQ15004 111 aa10.43□□□□□ -0.74
LIG1-211ENST00000596457 GGTA1PQ4G0N0 100 aa10.43□□□□□ -0.74
LIG1-211ENST00000596457 LACTB2Q53H82 288 aaPredicted RBP10.43□□□□□ -0.74
LIG1-211ENST00000596457 SFT2D3Q587I9 215 aa10.43□□□□□ -0.74
LIG1-211ENST00000596457 LIPMQ5VYY2 423 aa10.43□□□□□ -0.74
LIG1-211ENST00000596457 CYP20A1Q6UW02 462 aa10.43□□□□□ -0.74
LIG1-211ENST00000596457 TMEM205Q6UW68 189 aa10.43□□□□□ -0.74
LIG1-211ENST00000596457 LRIG3Q6UXM1 1119 aa10.43□□□□□ -0.74
LIG1-211ENST00000596457 ASB18Q6ZVZ8 466 aa10.43□□□□□ -0.74
LIG1-211ENST00000596457 NDUFAF7Q7L592 441 aa10.43□□□□□ -0.74
LIG1-211ENST00000596457 CROCCP2Q86T23 111 aa10.43□□□□□ -0.74
LIG1-211ENST00000596457 EXOC3L1Q86VI1 746 aa10.43□□□□□ -0.74
LIG1-211ENST00000596457 TMEM52Q8NDY8 209 aa10.43□□□□□ -0.74
LIG1-211ENST00000596457 PLPP5Q8NEB5 264 aa10.43□□□□□ -0.74
LIG1-211ENST00000596457 KCNA7Q96RP8 456 aa10.43□□□□□ -0.74
LIG1-211ENST00000596457 ZNF382Q96SR6 550 aa10.43□□□□□ -0.74
LIG1-211ENST00000596457 CSF3RQ99062 836 aa10.43□□□□□ -0.74
LIG1-211ENST00000596457 SERPINI1Q99574 410 aa10.43□□□□□ -0.74
LIG1-211ENST00000596457 NUDT9Q9BW91 350 aa10.43□□□□□ -0.74
LIG1-211ENST00000596457 CLK4Q9HAZ1 481 aaKnown RBP10.43□□□□□ -0.74
LIG1-211ENST00000596457 NECTIN3Q9NQS3 549 aa10.43□□□□□ -0.74
LIG1-211ENST00000596457 PRTFDC1Q9NRG1 225 aa10.43□□□□□ -0.74
LIG1-211ENST00000596457 MKS1Q9NXB0 559 aa10.43□□□□□ -0.74
LIG1-211ENST00000596457 GPR83Q9NYM4 423 aa10.43□□□□□ -0.74
LIG1-211ENST00000596457 DAPP1Q9UN19 280 aa10.43□□□□□ -0.74
LIG1-211ENST00000596457 STK38LQ9Y2H1 464 aa10.43□□□□□ -0.74
LIG1-211ENST00000596457 FIS1Q9Y3D6 152 aa10.43□□□□□ -0.74
LIG1-211ENST00000596457 SPACA6W5XKT8 324 aa10.43□□□□□ -0.74
LIG1-211ENST00000596457 SPTAN1Q13813 2472 aaKnown RBP10.42□□□□□ -0.74
LIG1-211ENST00000596457 DOPEY1Q5JWR5 2465 aa10.42□□□□□ -0.74
LIG1-211ENST00000596457 ARHGAP10A1A4S6 786 aa10.42□□□□□ -0.74
LIG1-211ENST00000596457 GOLGA6L10A6NI86 522 aa10.42□□□□□ -0.74
LIG1-211ENST00000596457 FOXE1O00358 373 aaPredicted RBP10.42□□□□□ -0.74
LIG1-211ENST00000596457 CLDN4O14493 209 aa10.42□□□□□ -0.74
LIG1-211ENST00000596457 EEDO75530 441 aaKnown RBP10.42□□□□□ -0.74
LIG1-211ENST00000596457 KRT6AP02538 564 aa10.42□□□□□ -0.74
LIG1-211ENST00000596457 KRT6BP04259 564 aa10.42□□□□□ -0.74
LIG1-211ENST00000596457 HIST1H1TP22492 207 aaPredicted RBP10.42□□□□□ -0.74
LIG1-211ENST00000596457 SERPINB3P29508 390 aa10.42□□□□□ -0.74
LIG1-211ENST00000596457 KRT6CP48668 564 aa10.42□□□□□ -0.74
LIG1-211ENST00000596457 PGDP52209 483 aa10.42□□□□□ -0.74
LIG1-211ENST00000596457 HNRNPFP52597 415 aaKnown RBP10.42□□□□□ -0.74
LIG1-211ENST00000596457 PKNOX1P55347 436 aa10.42□□□□□ -0.74
LIG1-211ENST00000596457 BTKQ06187 659 aa10.42□□□□□ -0.74
LIG1-211ENST00000596457 Q0VFX4 171 aa10.42□□□□□ -0.74
LIG1-211ENST00000596457 ASPHQ12797 758 aa10.42□□□□□ -0.74
LIG1-211ENST00000596457 LCP2Q13094 533 aa10.42□□□□□ -0.74
LIG1-211ENST00000596457 SLC13A2Q13183 592 aa10.42□□□□□ -0.74
LIG1-211ENST00000596457 RCN2Q14257 317 aa10.42□□□□□ -0.74
LIG1-211ENST00000596457 PCOLCEQ15113 449 aa10.42□□□□□ -0.74
LIG1-211ENST00000596457 BTBD16Q32M84 506 aa10.42□□□□□ -0.74
LIG1-211ENST00000596457 ZCCHC23Q6ZST2 131 aa10.42□□□□□ -0.74
LIG1-211ENST00000596457 KBTBD2Q8IY47 623 aa10.42□□□□□ -0.74
LIG1-211ENST00000596457 MYRIPQ8NFW9 859 aa10.42□□□□□ -0.74
LIG1-211ENST00000596457 AGAP11Q8TF27 550 aa10.42□□□□□ -0.74
LIG1-211ENST00000596457 SREK1Q8WXA9 508 aaKnown RBP10.42□□□□□ -0.74
LIG1-211ENST00000596457 NACC2Q96BF6 587 aa10.42□□□□□ -0.74
LIG1-211ENST00000596457 PAIP2Q9BPZ3 127 aaKnown RBP10.42□□□□□ -0.74
LIG1-211ENST00000596457 GATA5Q9BWX5 397 aaPredicted RBP10.42□□□□□ -0.74
LIG1-211ENST00000596457 MFRPQ9BY79 579 aa10.42□□□□□ -0.74
LIG1-211ENST00000596457 MRPL1Q9BYD6 325 aaKnown RBP10.42□□□□□ -0.74
LIG1-211ENST00000596457 ZNF700Q9H0M5 742 aa10.42□□□□□ -0.74
LIG1-211ENST00000596457 PRDM9Q9NQV7 894 aa10.42□□□□□ -0.74
LIG1-211ENST00000596457 PNO1Q9NRX1 252 aaKnown RBP10.42□□□□□ -0.74
LIG1-211ENST00000596457 RIC8BQ9NVN3 520 aa10.42□□□□□ -0.74
LIG1-211ENST00000596457 AHSPQ9NZD4 102 aa10.42□□□□□ -0.74
LIG1-211ENST00000596457 SENP1Q9P0U3 644 aa10.42□□□□□ -0.74
LIG1-211ENST00000596457 MRPS33Q9Y291 106 aaKnown RBP10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms