RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 FAM180BQ6P0A1 224 aa16.44■□□□□ 0.22
SMARCA4-215ENST00000590574 TTLL2Q9BWV7 592 aa16.44■□□□□ 0.22
SMARCA4-215ENST00000590574 NDOR1Q9UHB4 597 aa16.44■□□□□ 0.22
SMARCA4-215ENST00000590574 FGF18O76093 207 aa16.43■□□□□ 0.22
SMARCA4-215ENST00000590574 CDKL4Q5MAI5 379 aa16.43■□□□□ 0.22
SMARCA4-215ENST00000590574 FAM86B1Q8N7N1 296 aa16.43■□□□□ 0.22
SMARCA4-215ENST00000590574 TTLQ8NG68 377 aa16.43■□□□□ 0.22
SMARCA4-215ENST00000590574 EPYCQ99645 322 aa16.43■□□□□ 0.22
SMARCA4-215ENST00000590574 CPPED1Q9BRF8 314 aaPredicted RBP16.43■□□□□ 0.22
SMARCA4-215ENST00000590574 IFT27Q9BW83 186 aa16.43■□□□□ 0.22
SMARCA4-215ENST00000590574 ITM2BQ9Y287 266 aa16.43■□□□□ 0.22
SMARCA4-215ENST00000590574 DAPL1A0PJW8 107 aa16.43■□□□□ 0.22
SMARCA4-215ENST00000590574 H7BY64 318 aa16.43■□□□□ 0.22
SMARCA4-215ENST00000590574 APODP05090 189 aa16.43■□□□□ 0.22
SMARCA4-215ENST00000590574 OR12D1P0DN82 309 aa16.43■□□□□ 0.22
SMARCA4-215ENST00000590574 DDX6P26196 483 aaKnown RBP eCLIP16.43■□□□□ 0.225e-9■■□□□ 13.9
SMARCA4-215ENST00000590574 MAT2AP31153 395 aaKnown RBP16.43■□□□□ 0.22
SMARCA4-215ENST00000590574 ADARB1P78563 741 aaKnown RBP16.43■□□□□ 0.22
SMARCA4-215ENST00000590574 DSC1Q08554 894 aa16.43■□□□□ 0.22
SMARCA4-215ENST00000590574 MGAT3Q09327 533 aa16.43■□□□□ 0.22
SMARCA4-215ENST00000590574 CCBE1Q6UXH8 406 aaPredicted RBP16.43■□□□□ 0.22
SMARCA4-215ENST00000590574 HMGN2P46Q86SG4 172 aa16.43■□□□□ 0.22
SMARCA4-215ENST00000590574 DCUN1D3Q8IWE4 304 aa16.43■□□□□ 0.22
SMARCA4-215ENST00000590574 PRAP1Q96NZ9 151 aa16.43■□□□□ 0.22
SMARCA4-215ENST00000590574 CPSF4LA6NMK7 179 aaKnown RBP16.43■□□□□ 0.22
SMARCA4-215ENST00000590574 CAPN5O15484 640 aaPredicted RBP16.43■□□□□ 0.22
SMARCA4-215ENST00000590574 OR6A2O95222 327 aa16.43■□□□□ 0.22
SMARCA4-215ENST00000590574 APOL3O95236 402 aa16.43■□□□□ 0.22
SMARCA4-215ENST00000590574 SLC35G6P0C7Q6 338 aa16.43■□□□□ 0.22
SMARCA4-215ENST00000590574 CPN2P22792 545 aa16.43■□□□□ 0.22
SMARCA4-215ENST00000590574 MLLT10P55197 1068 aa16.43■□□□□ 0.22
SMARCA4-215ENST00000590574 SELENOWP63302 87 aa16.43■□□□□ 0.22
SMARCA4-215ENST00000590574 ZNF155Q12901 538 aaPredicted RBP16.43■□□□□ 0.22
SMARCA4-215ENST00000590574 GINS1Q14691 196 aa16.43■□□□□ 0.22
SMARCA4-215ENST00000590574 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.43■□□□□ 0.22
SMARCA4-215ENST00000590574 CADM2Q8N3J6 435 aa16.43■□□□□ 0.22
SMARCA4-215ENST00000590574 OR52N2Q8NGI0 321 aa16.43■□□□□ 0.22
SMARCA4-215ENST00000590574 WDR26Q9H7D7 661 aa16.43■□□□□ 0.22
SMARCA4-215ENST00000590574 SPHK2Q9NRA0 654 aa16.43■□□□□ 0.22
SMARCA4-215ENST00000590574 DOCK5Q9H7D0 1870 aa16.43■□□□□ 0.22
SMARCA4-215ENST00000590574 GREB1LQ9C091 1923 aaPredicted RBP16.43■□□□□ 0.22
SMARCA4-215ENST00000590574 SLC10A3P09131 477 aa16.43■□□□□ 0.22
SMARCA4-215ENST00000590574 CTSEP14091 401 aa16.43■□□□□ 0.22
SMARCA4-215ENST00000590574 CD97P48960 835 aa16.43■□□□□ 0.22
SMARCA4-215ENST00000590574 SKP1P63208 163 aa16.43■□□□□ 0.22
SMARCA4-215ENST00000590574 GSTM4Q03013 218 aa16.43■□□□□ 0.22
SMARCA4-215ENST00000590574 LRRC32Q14392 662 aa16.43■□□□□ 0.22
SMARCA4-215ENST00000590574 LASP1Q14847 261 aaKnown RBP16.43■□□□□ 0.22
SMARCA4-215ENST00000590574 MICAQ29983 383 aa16.43■□□□□ 0.22
SMARCA4-215ENST00000590574 VITQ6UXI7 678 aa16.43■□□□□ 0.22
SMARCA4-215ENST00000590574 COMMD6Q7Z4G1 85 aa16.43■□□□□ 0.22
SMARCA4-215ENST00000590574 CIDECQ96AQ7 238 aaPredicted RBP16.43■□□□□ 0.22
SMARCA4-215ENST00000590574 TESCQ96BS2 214 aa16.43■□□□□ 0.22
SMARCA4-215ENST00000590574 ACVR1Q04771 509 aa16.42■□□□□ 0.22
SMARCA4-215ENST00000590574 PCDH1Q08174 1060 aa16.42■□□□□ 0.22
SMARCA4-215ENST00000590574 TMEM44Q2T9K0 475 aa16.42■□□□□ 0.22
SMARCA4-215ENST00000590574 WSCD2Q2TBF2 565 aa16.42■□□□□ 0.22
SMARCA4-215ENST00000590574 UAP1L1Q3KQV9 507 aa16.42■□□□□ 0.22
SMARCA4-215ENST00000590574 LINC00471Q8N535 108 aa16.42■□□□□ 0.22
SMARCA4-215ENST00000590574 OR5P2Q8WZ92 322 aa16.42■□□□□ 0.22
SMARCA4-215ENST00000590574 OR6C70A6NIJ9 312 aa16.42■□□□□ 0.22
SMARCA4-215ENST00000590574 M0R129 80 aa16.42■□□□□ 0.22
SMARCA4-215ENST00000590574 FAAHO00519 579 aa16.42■□□□□ 0.22
SMARCA4-215ENST00000590574 TEX28O15482 410 aa16.42■□□□□ 0.22
SMARCA4-215ENST00000590574 RFPL2O75678 378 aa16.42■□□□□ 0.22
SMARCA4-215ENST00000590574 TACR1P25103 407 aa16.42■□□□□ 0.22
SMARCA4-215ENST00000590574 CDKN2CP42773 168 aa16.42■□□□□ 0.22
SMARCA4-215ENST00000590574 VEZF1Q14119 521 aa16.42■□□□□ 0.22
SMARCA4-215ENST00000590574 RNF186Q9NXI6 227 aa16.42■□□□□ 0.22
SMARCA4-215ENST00000590574 HIST1H2ABP04908 130 aa16.42■□□□□ 0.22
SMARCA4-215ENST00000590574 PIGAP37287 484 aa16.42■□□□□ 0.22
SMARCA4-215ENST00000590574 CATSPEREQ5SY80 951 aa16.42■□□□□ 0.22
SMARCA4-215ENST00000590574 DLEU7Q6UYE1 221 aa16.42■□□□□ 0.22
SMARCA4-215ENST00000590574 HIST3H2AQ7L7L0 130 aa16.42■□□□□ 0.22
SMARCA4-215ENST00000590574 C16orf78Q8WTQ4 265 aa16.42■□□□□ 0.22
SMARCA4-215ENST00000590574 HIST1H2ACQ93077 130 aa16.42■□□□□ 0.22
SMARCA4-215ENST00000590574 C17orf62Q9BQA9 187 aa16.42■□□□□ 0.22
SMARCA4-215ENST00000590574 PRAMEF33A0A0G2JMD5 474 aa16.42■□□□□ 0.22
SMARCA4-215ENST00000590574 LRRC72A6NJI9 287 aa16.42■□□□□ 0.22
SMARCA4-215ENST00000590574 AKAP8O43823 692 aaKnown RBP16.42■□□□□ 0.22
SMARCA4-215ENST00000590574 PRAMEF10O60809 474 aa16.42■□□□□ 0.22
SMARCA4-215ENST00000590574 CDH11P55287 796 aa16.42■□□□□ 0.22
SMARCA4-215ENST00000590574 MLLT1Q03111 559 aaPredicted RBP16.42■□□□□ 0.22
SMARCA4-215ENST00000590574 NDUFA9Q16795 377 aa16.42■□□□□ 0.22
SMARCA4-215ENST00000590574 HLA-DQA1Q5Y7H0 255 aa16.42■□□□□ 0.22
SMARCA4-215ENST00000590574 ZNF433Q8N7K0 673 aaPredicted RBP16.42■□□□□ 0.22
SMARCA4-215ENST00000590574 TMEM145Q8NBT3 493 aa16.42■□□□□ 0.22
SMARCA4-215ENST00000590574 TAPBPO15533 448 aa16.41■□□□□ 0.22
SMARCA4-215ENST00000590574 SEC13P55735 322 aa16.41■□□□□ 0.22
SMARCA4-215ENST00000590574 BIKQ13323 160 aa16.41■□□□□ 0.22
SMARCA4-215ENST00000590574 TRIM71Q2Q1W2 868 aaKnown RBP16.41■□□□□ 0.22
SMARCA4-215ENST00000590574 ATAT1Q5SQI0 421 aa16.41■□□□□ 0.22
SMARCA4-215ENST00000590574 NXPE4Q6UWF7 544 aa16.41■□□□□ 0.22
SMARCA4-215ENST00000590574 SLC36A4Q6YBV0 504 aa16.41■□□□□ 0.22
SMARCA4-215ENST00000590574 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.41■□□□□ 0.228e-7■■■□□ 15.1
SMARCA4-215ENST00000590574 HDDC3Q8N4P3 179 aa16.41■□□□□ 0.22
SMARCA4-215ENST00000590574 LMLNQ96KR4 655 aa16.41■□□□□ 0.22
SMARCA4-215ENST00000590574 TNFRSF10DQ9UBN6 386 aa16.41■□□□□ 0.22
SMARCA4-215ENST00000590574 EDDM13A0A1B0GTR0 161 aa16.41■□□□□ 0.22
SMARCA4-215ENST00000590574 GABRR3A8MPY1 467 aa16.41■□□□□ 0.22
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