RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 GCAP28676 217 aa11.32□□□□□ -0.6
TPM4-212ENST00000590180 PIK3CBP42338 1070 aa11.32□□□□□ -0.6
TPM4-212ENST00000590180 SSR2P43308 183 aa11.32□□□□□ -0.6
TPM4-212ENST00000590180 NEK2P51955 445 aa11.32□□□□□ -0.6
TPM4-212ENST00000590180 CCNG1P51959 295 aa11.32□□□□□ -0.6
TPM4-212ENST00000590180 HNRNPFP52597 415 aaKnown RBP11.32□□□□□ -0.6
TPM4-212ENST00000590180 HSD17B7P56937 341 aa11.32□□□□□ -0.6
TPM4-212ENST00000590180 RPS13P62277 151 aaKnown RBP11.32□□□□□ -0.6
TPM4-212ENST00000590180 STX4Q12846 297 aa11.32□□□□□ -0.6
TPM4-212ENST00000590180 SLAMF1Q13291 335 aa11.32□□□□□ -0.6
TPM4-212ENST00000590180 MRPL49Q13405 166 aaKnown RBP11.32□□□□□ -0.6
TPM4-212ENST00000590180 ELOAQ14241 798 aaKnown RBP11.32□□□□□ -0.6
TPM4-212ENST00000590180 NR6A1Q15406 480 aa11.32□□□□□ -0.6
TPM4-212ENST00000590180 ZRSR2Q15696 482 aaKnown RBP11.32□□□□□ -0.6
TPM4-212ENST00000590180 FHL5Q5TD97 284 aa11.32□□□□□ -0.6
TPM4-212ENST00000590180 KHDRBS2Q5VWX1 349 aaKnown RBP11.32□□□□□ -0.6
TPM4-212ENST00000590180 TTC19Q6DKK2 380 aaPredicted RBP11.32□□□□□ -0.6
TPM4-212ENST00000590180 OR4C11Q6IEV9 310 aa11.32□□□□□ -0.6
TPM4-212ENST00000590180 H3F3CQ6NXT2 135 aa11.32□□□□□ -0.6
TPM4-212ENST00000590180 METTL2BQ6P1Q9 378 aaKnown RBP11.32□□□□□ -0.6
TPM4-212ENST00000590180 MILR1Q7Z6M3 343 aa11.32□□□□□ -0.6
TPM4-212ENST00000590180 RPS19BP1Q86WX3 136 aaKnown RBP11.32□□□□□ -0.6
TPM4-212ENST00000590180 CRLF3Q8IUI8 442 aa11.32□□□□□ -0.6
TPM4-212ENST00000590180 BEST3Q8N1M1 668 aa11.32□□□□□ -0.6
TPM4-212ENST00000590180 SLC5A8Q8N695 610 aa11.32□□□□□ -0.6
TPM4-212ENST00000590180 TMEM52Q8NDY8 209 aa11.32□□□□□ -0.6
TPM4-212ENST00000590180 PRR7Q8TB68 274 aa11.32□□□□□ -0.6
TPM4-212ENST00000590180 GRHL3Q8TE85 626 aa11.32□□□□□ -0.6
TPM4-212ENST00000590180 UBLCP1Q8WVY7 318 aaPredicted RBP11.32□□□□□ -0.6
TPM4-212ENST00000590180 CDK15Q96Q40 435 aa11.32□□□□□ -0.6
TPM4-212ENST00000590180 CSF3RQ99062 836 aa11.32□□□□□ -0.6
TPM4-212ENST00000590180 DEFB126Q9BYW3 111 aa11.32□□□□□ -0.6
TPM4-212ENST00000590180 TXLNGYQ9BZA5 131 aa11.32□□□□□ -0.6
TPM4-212ENST00000590180 L2HGDHQ9H9P8 463 aa11.32□□□□□ -0.6
TPM4-212ENST00000590180 LYRM4Q9HD34 91 aa11.32□□□□□ -0.6
TPM4-212ENST00000590180 TBK1Q9UHD2 729 aa11.32□□□□□ -0.6
TPM4-212ENST00000590180 FBXW2Q9UKT8 454 aa11.32□□□□□ -0.6
TPM4-212ENST00000590180 NTNG1Q9Y2I2 539 aa11.32□□□□□ -0.6
TPM4-212ENST00000590180 SHANK1Q9Y566 2161 aa11.31□□□□□ -0.6
TPM4-212ENST00000590180 LRRK2Q5S007 2527 aa11.31□□□□□ -0.6
TPM4-212ENST00000590180 IGKV3D-11A0A0A0MRZ8 115 aa11.31□□□□□ -0.6
TPM4-212ENST00000590180 OR5H15A6NDH6 313 aa11.31□□□□□ -0.6
TPM4-212ENST00000590180 SAGE2PA6NJ88 616 aa11.31□□□□□ -0.6
TPM4-212ENST00000590180 H0YIV9 168 aa11.31□□□□□ -0.6
TPM4-212ENST00000590180 STX16-NPEPL1H3BU86 382 aa11.31□□□□□ -0.6
TPM4-212ENST00000590180 CYR61O00622 381 aa11.31□□□□□ -0.6
TPM4-212ENST00000590180 OR7A17O14581 309 aa11.31□□□□□ -0.6
TPM4-212ENST00000590180 STX16O14662 325 aa11.31□□□□□ -0.6
TPM4-212ENST00000590180 UGDHO60701 494 aa11.31□□□□□ -0.6
TPM4-212ENST00000590180 MYO1DO94832 1006 aa11.31□□□□□ -0.6
TPM4-212ENST00000590180 TAC1P20366 129 aa11.31□□□□□ -0.6
TPM4-212ENST00000590180 HIST1H1TP22492 207 aaPredicted RBP11.31□□□□□ -0.6
TPM4-212ENST00000590180 CPN2P22792 545 aa11.31□□□□□ -0.6
TPM4-212ENST00000590180 OC90Q02509 493 aaPredicted RBP11.31□□□□□ -0.6
TPM4-212ENST00000590180 SGO1Q5FBB7 561 aa11.31□□□□□ -0.6
TPM4-212ENST00000590180 RPUSD3Q6P087 351 aaKnown RBP11.31□□□□□ -0.6
TPM4-212ENST00000590180 ZNF793Q6ZN11 406 aa11.31□□□□□ -0.6
TPM4-212ENST00000590180 KIF2BQ8N4N8 673 aa11.31□□□□□ -0.6
TPM4-212ENST00000590180 FAM26EQ8N5C1 309 aa11.31□□□□□ -0.6
TPM4-212ENST00000590180 EIF1ADQ8N9N8 165 aaKnown RBP11.31□□□□□ -0.6
TPM4-212ENST00000590180 L3MBTL4Q8NA19 623 aa11.31□□□□□ -0.6
TPM4-212ENST00000590180 ELP5Q8TE02 316 aa11.31□□□□□ -0.6
TPM4-212ENST00000590180 NSUN5Q96P11 429 aaKnown RBP11.31□□□□□ -0.6
TPM4-212ENST00000590180 MAPKAP1Q9BPZ7 522 aa11.31□□□□□ -0.6
TPM4-212ENST00000590180 UTP23Q9BRU9 249 aaKnown RBP11.31□□□□□ -0.6
TPM4-212ENST00000590180 SORBS1Q9BX66 1292 aaKnown RBP11.31□□□□□ -0.6
TPM4-212ENST00000590180 ALOXE3Q9BYJ1 711 aa11.31□□□□□ -0.6
TPM4-212ENST00000590180 RNF32Q9H0A6 362 aa11.31□□□□□ -0.6
TPM4-212ENST00000590180 SEMA4BQ9NPR2 832 aaPredicted RBP11.31□□□□□ -0.6
TPM4-212ENST00000590180 DMRT3Q9NQL9 472 aa11.31□□□□□ -0.6
TPM4-212ENST00000590180 ANKRD10Q9NXR5 420 aa11.31□□□□□ -0.6
TPM4-212ENST00000590180 KCMF1Q9P0J7 381 aa11.31□□□□□ -0.6
TPM4-212ENST00000590180 TMEM216Q9P0N5 145 aa11.31□□□□□ -0.6
TPM4-212ENST00000590180 PSMC3IPQ9P2W1 217 aaPredicted RBP11.31□□□□□ -0.6
TPM4-212ENST00000590180 DOPEY2Q9Y3R5 2298 aa11.31□□□□□ -0.6
TPM4-212ENST00000590180 ANKUB1A6NFN9 424 aa11.3□□□□□ -0.6
TPM4-212ENST00000590180 MAN1A2O60476 641 aa11.3□□□□□ -0.6
TPM4-212ENST00000590180 PRAMEF2O60811 474 aa11.3□□□□□ -0.6
TPM4-212ENST00000590180 AGFG2O95081 481 aa11.3□□□□□ -0.6
TPM4-212ENST00000590180 CBX6O95503 412 aa11.3□□□□□ -0.6
TPM4-212ENST00000590180 PYGBP11216 843 aa11.3□□□□□ -0.6
TPM4-212ENST00000590180 TSPAN8P19075 237 aa11.3□□□□□ -0.6
TPM4-212ENST00000590180 PPP2R1BP30154 601 aa11.3□□□□□ -0.6
TPM4-212ENST00000590180 CD96P40200 585 aa11.3□□□□□ -0.6
TPM4-212ENST00000590180 CLCN2P51788 898 aa11.3□□□□□ -0.6
TPM4-212ENST00000590180 CDH13P55290 713 aa11.3□□□□□ -0.6
TPM4-212ENST00000590180 ID2Q02363 134 aa11.3□□□□□ -0.6
TPM4-212ENST00000590180 FAM180AQ6UWF9 173 aa11.3□□□□□ -0.6
TPM4-212ENST00000590180 RPS27LQ71UM5 84 aaKnown RBP11.3□□□□□ -0.6
TPM4-212ENST00000590180 SCUBE1Q8IWY4 988 aa11.3□□□□□ -0.6
TPM4-212ENST00000590180 TMEM151AQ8N4L1 468 aa11.3□□□□□ -0.6
TPM4-212ENST00000590180 BCORP1Q8N888 145 aa11.3□□□□□ -0.6
TPM4-212ENST00000590180 NFAM1Q8NET5 270 aaPredicted RBP11.3□□□□□ -0.6
TPM4-212ENST00000590180 OR52B6Q8NGF0 335 aa11.3□□□□□ -0.6
TPM4-212ENST00000590180 FAR1Q8WVX9 515 aa11.3□□□□□ -0.6
TPM4-212ENST00000590180 NTMT1Q9BV86 223 aa11.3□□□□□ -0.6
TPM4-212ENST00000590180 EPB41L4BQ9H329 900 aa11.3□□□□□ -0.6
TPM4-212ENST00000590180 FETUBQ9UGM5 382 aa11.3□□□□□ -0.6
TPM4-212ENST00000590180 PCTPQ9UKL6 214 aa11.3□□□□□ -0.6
TPM4-212ENST00000590180 TSC22D4Q9Y3Q8 395 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms