RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 ARL1P40616 181 aaPredicted RBP9.78□□□□□ -0.84
SDF2-208ENST00000589788 CASP2P42575 452 aa9.78□□□□□ -0.84
SDF2-208ENST00000589788 OLR1P78380 273 aa9.78□□□□□ -0.84
SDF2-208ENST00000589788 BTN3A2P78410 334 aa9.78□□□□□ -0.84
SDF2-208ENST00000589788 EEF1A2Q05639 463 aaKnown RBP9.78□□□□□ -0.84
SDF2-208ENST00000589788 TGM3Q08188 693 aa9.78□□□□□ -0.84
SDF2-208ENST00000589788 GTF2H2Q13888 395 aa9.78□□□□□ -0.84
SDF2-208ENST00000589788 MYBPC3Q14896 1274 aa9.78□□□□□ -0.84
SDF2-208ENST00000589788 PCBP2Q15366 365 aaKnown RBP eCLIP9.78□□□□□ -0.84
SDF2-208ENST00000589788 TNFAIP8L3Q5GJ75 292 aa9.78□□□□□ -0.84
SDF2-208ENST00000589788 VWA5B1Q5TIE3 1220 aa9.78□□□□□ -0.84
SDF2-208ENST00000589788 AGBL2Q5U5Z8 902 aa9.78□□□□□ -0.84
SDF2-208ENST00000589788 PRAMEF9Q5VWM5 478 aa9.78□□□□□ -0.84
SDF2-208ENST00000589788 GTF2H2CQ6P1K8 395 aa9.78□□□□□ -0.84
SDF2-208ENST00000589788 METTL2BQ6P1Q9 378 aaKnown RBP9.78□□□□□ -0.84
SDF2-208ENST00000589788 MED27Q6P2C8 311 aa9.78□□□□□ -0.84
SDF2-208ENST00000589788 TRIM40Q6P9F5 258 aa9.78□□□□□ -0.84
SDF2-208ENST00000589788 TIFABQ6ZNK6 161 aa9.78□□□□□ -0.84
SDF2-208ENST00000589788 C8orf86Q6ZUL3 223 aa9.78□□□□□ -0.84
SDF2-208ENST00000589788 HPS6Q86YV9 775 aa9.78□□□□□ -0.84
SDF2-208ENST00000589788 PTGR2Q8N8N7 351 aaPredicted RBP9.78□□□□□ -0.84
SDF2-208ENST00000589788 MZB1Q8WU39 189 aa9.78□□□□□ -0.84
SDF2-208ENST00000589788 PHF21BQ96EK2 531 aa9.78□□□□□ -0.84
SDF2-208ENST00000589788 OR1F2PQ96R84 312 aa9.78□□□□□ -0.84
SDF2-208ENST00000589788 MRPL57Q9BQC6 102 aaKnown RBP9.78□□□□□ -0.84
SDF2-208ENST00000589788 NUDT9Q9BW91 350 aa9.78□□□□□ -0.84
SDF2-208ENST00000589788 VN1R1Q9GZP7 353 aa9.78□□□□□ -0.84
SDF2-208ENST00000589788 STMN4Q9H169 189 aaPredicted RBP9.78□□□□□ -0.84
SDF2-208ENST00000589788 MRPL46Q9H2W6 279 aaKnown RBP9.78□□□□□ -0.84
SDF2-208ENST00000589788 KLHL31Q9H511 634 aa9.78□□□□□ -0.84
SDF2-208ENST00000589788 ACTR8Q9H981 624 aa9.78□□□□□ -0.84
SDF2-208ENST00000589788 CLK4Q9HAZ1 481 aaKnown RBP9.78□□□□□ -0.84
SDF2-208ENST00000589788 ZNF160Q9HCG1 818 aa9.78□□□□□ -0.84
SDF2-208ENST00000589788 MLXIPLQ9NP71 852 aa9.78□□□□□ -0.84
SDF2-208ENST00000589788 MED4Q9NPJ6 270 aa9.78□□□□□ -0.84
SDF2-208ENST00000589788 RIC8BQ9NVN3 520 aa9.78□□□□□ -0.84
SDF2-208ENST00000589788 C19orf25Q9UFG5 118 aaPredicted RBP9.78□□□□□ -0.84
SDF2-208ENST00000589788 TBK1Q9UHD2 729 aa9.78□□□□□ -0.84
SDF2-208ENST00000589788 ZNF490Q9ULM2 529 aaPredicted RBP9.78□□□□□ -0.84
SDF2-208ENST00000589788 A0A0G2JN53 185 aa9.77□□□□□ -0.85
SDF2-208ENST00000589788 LRRC14BA6NHZ5 514 aa9.77□□□□□ -0.85
SDF2-208ENST00000589788 STX16-NPEPL1H3BU86 382 aa9.77□□□□□ -0.85
SDF2-208ENST00000589788 STX16O14662 325 aa9.77□□□□□ -0.85
SDF2-208ENST00000589788 OIP5O43482 229 aa9.77□□□□□ -0.85
SDF2-208ENST00000589788 DPM1O60762 260 aa9.77□□□□□ -0.85
SDF2-208ENST00000589788 B4GALT2O60909 372 aa9.77□□□□□ -0.85
SDF2-208ENST00000589788 CDC123O75794 336 aaPredicted RBP9.77□□□□□ -0.85
SDF2-208ENST00000589788 WFS1O76024 890 aa9.77□□□□□ -0.85
SDF2-208ENST00000589788 SIX3O95343 332 aaPredicted RBP9.77□□□□□ -0.85
SDF2-208ENST00000589788 FHP07954 510 aa9.77□□□□□ -0.85
SDF2-208ENST00000589788 SMIM10L1P0DMW3 83 aa9.77□□□□□ -0.85
SDF2-208ENST00000589788 COX6A1P12074 109 aa9.77□□□□□ -0.85
SDF2-208ENST00000589788 RNH1P13489 461 aaKnown RBP9.77□□□□□ -0.85
SDF2-208ENST00000589788 CD22P20273 847 aa9.77□□□□□ -0.85
SDF2-208ENST00000589788 TAC1P20366 129 aa9.77□□□□□ -0.85
SDF2-208ENST00000589788 EEF1DP29692 281 aaKnown RBP9.77□□□□□ -0.85
SDF2-208ENST00000589788 SERPINB1P30740 379 aa9.77□□□□□ -0.85
SDF2-208ENST00000589788 HNRNPH1P31943 449 aaKnown RBP9.77□□□□□ -0.85
SDF2-208ENST00000589788 PLA2G16P53816 162 aa9.77□□□□□ -0.85
SDF2-208ENST00000589788 SOX8P57073 446 aa9.77□□□□□ -0.85
SDF2-208ENST00000589788 LIPJQ5W064 366 aa9.77□□□□□ -0.85
SDF2-208ENST00000589788 GRHL2Q6ISB3 625 aa9.77□□□□□ -0.85
SDF2-208ENST00000589788 CHSY3Q70JA7 882 aa9.77□□□□□ -0.85
SDF2-208ENST00000589788 NDUFAF7Q7L592 441 aa9.77□□□□□ -0.85
SDF2-208ENST00000589788 GOLGA7Q7Z5G4 137 aa9.77□□□□□ -0.85
SDF2-208ENST00000589788 LCA5Q86VQ0 697 aa9.77□□□□□ -0.85
SDF2-208ENST00000589788 KBTBD2Q8IY47 623 aa9.77□□□□□ -0.85
SDF2-208ENST00000589788 OR2L5Q8NG80 312 aa9.77□□□□□ -0.85
SDF2-208ENST00000589788 ACMSDQ8TDX5 336 aa9.77□□□□□ -0.85
SDF2-208ENST00000589788 EDARADDQ8WWZ3 215 aa9.77□□□□□ -0.85
SDF2-208ENST00000589788 TM9SF4Q92544 642 aa9.77□□□□□ -0.85
SDF2-208ENST00000589788 ATP6V1E2Q96A05 226 aa9.77□□□□□ -0.85
SDF2-208ENST00000589788 TBC1D20Q96BZ9 403 aa9.77□□□□□ -0.85
SDF2-208ENST00000589788 MS4A6EQ96DS6 147 aa9.77□□□□□ -0.85
SDF2-208ENST00000589788 SMIM10Q96HG1 83 aa9.77□□□□□ -0.85
SDF2-208ENST00000589788 THOC3Q96J01 351 aaKnown RBP9.77□□□□□ -0.85
SDF2-208ENST00000589788 ATP6V1G3Q96LB4 118 aa9.77□□□□□ -0.85
SDF2-208ENST00000589788 SMAD5Q99717 465 aaKnown RBP9.77□□□□□ -0.85
SDF2-208ENST00000589788 MESP1Q9BRJ9 268 aa9.77□□□□□ -0.85
SDF2-208ENST00000589788 REXO4Q9GZR2 422 aaKnown RBP9.77□□□□□ -0.85
SDF2-208ENST00000589788 LHPPQ9H008 270 aa9.77□□□□□ -0.85
SDF2-208ENST00000589788 RHBGQ9H310 441 aa9.77□□□□□ -0.85
SDF2-208ENST00000589788 CENPHQ9H3R5 247 aa9.77□□□□□ -0.85
SDF2-208ENST00000589788 IPPKQ9H8X2 491 aa9.77□□□□□ -0.85
SDF2-208ENST00000589788 COPS7BQ9H9Q2 264 aaPredicted RBP9.77□□□□□ -0.85
SDF2-208ENST00000589788 SENP1Q9P0U3 644 aa9.77□□□□□ -0.85
SDF2-208ENST00000589788 C5AR2Q9P296 337 aa9.77□□□□□ -0.85
SDF2-208ENST00000589788 SCN2AQ99250 2005 aa9.77□□□□□ -0.85
SDF2-208ENST00000589788 DOCK10Q96BY6 2186 aa9.76□□□□□ -0.85
SDF2-208ENST00000589788 LOC102723996A0A087X1L8 192 aa9.76□□□□□ -0.85
SDF2-208ENST00000589788 IGHV1-45A0A0A0MS14 117 aa9.76□□□□□ -0.85
SDF2-208ENST00000589788 OR2W5A6NFC9 320 aa9.76□□□□□ -0.85
SDF2-208ENST00000589788 GOLGA8RI6L899 631 aa9.76□□□□□ -0.85
SDF2-208ENST00000589788 E2F3O00716 465 aa9.76□□□□□ -0.85
SDF2-208ENST00000589788 B3GALT2O43825 422 aa9.76□□□□□ -0.85
SDF2-208ENST00000589788 KALRNO60229 2985 aa9.76□□□□□ -0.85
SDF2-208ENST00000589788 UGDHO60701 494 aa9.76□□□□□ -0.85
SDF2-208ENST00000589788 PF4P02776 101 aa9.76□□□□□ -0.85
SDF2-208ENST00000589788 GSTA1P08263 222 aa9.76□□□□□ -0.85
SDF2-208ENST00000589788 ICAM2P13598 275 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms