RNA–Protein interactions for RNA: ENST00000588915.1

VMP1-209, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 231 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-209ENST00000588915 IGDCC3Q8IVU1 814 aa12.99□□□□□ -0.33
VMP1-209ENST00000588915 PDIK1LQ8N165 341 aa12.99□□□□□ -0.33
VMP1-209ENST00000588915 GOLM1Q8NBJ4 401 aa12.99□□□□□ -0.33
VMP1-209ENST00000588915 SLCO2A1Q92959 643 aa12.99□□□□□ -0.33
VMP1-209ENST00000588915 QRFPRQ96P65 431 aa12.99□□□□□ -0.33
VMP1-209ENST00000588915 RASL10BQ96S79 203 aa12.99□□□□□ -0.33
VMP1-209ENST00000588915 SERINC2Q96SA4 455 aa12.99□□□□□ -0.33
VMP1-209ENST00000588915 EGFL8Q99944 293 aa12.99□□□□□ -0.33
VMP1-209ENST00000588915 EHD1Q9H4M9 534 aa12.99□□□□□ -0.33
VMP1-209ENST00000588915 PLAC1Q9HBJ0 212 aa12.99□□□□□ -0.33
VMP1-209ENST00000588915 GPRC5BQ9NZH0 403 aa12.99□□□□□ -0.33
VMP1-209ENST00000588915 VTI1BQ9UEU0 232 aa12.99□□□□□ -0.33
VMP1-209ENST00000588915 ASIC3Q9UHC3 531 aa12.99□□□□□ -0.33
VMP1-209ENST00000588915 DAPP1Q9UN19 280 aa12.99□□□□□ -0.33
VMP1-209ENST00000588915 DNAJC13O75165 2243 aa12.98□□□□□ -0.33
VMP1-209ENST00000588915 NF1P21359 2839 aa12.98□□□□□ -0.33
VMP1-209ENST00000588915 ANKDD1BA6NHY2 528 aa12.98□□□□□ -0.33
VMP1-209ENST00000588915 FAM90A27PA6NNH2 459 aa12.98□□□□□ -0.33
VMP1-209ENST00000588915 NPIPA2E9PIF3 369 aa12.98□□□□□ -0.33
VMP1-209ENST00000588915 NPIPA3F8WFD2 350 aa12.98□□□□□ -0.33
VMP1-209ENST00000588915 TGFBR3LH3BV60 316 aa12.98□□□□□ -0.33
VMP1-209ENST00000588915 CYR61O00622 381 aa12.98□□□□□ -0.33
VMP1-209ENST00000588915 CES2O00748 559 aa12.98□□□□□ -0.33
VMP1-209ENST00000588915 NRDCO43847 1150 aa12.98□□□□□ -0.33
VMP1-209ENST00000588915 PRKNO60260 465 aaPredicted RBP12.98□□□□□ -0.33
VMP1-209ENST00000588915 SUSD5O60279 629 aa12.98□□□□□ -0.33
VMP1-209ENST00000588915 SAT1P21673 171 aa12.98□□□□□ -0.33
VMP1-209ENST00000588915 HNRNPH1P31943 449 aaKnown RBP12.98□□□□□ -0.33
VMP1-209ENST00000588915 ZFP36L2P47974 494 aaKnown RBP12.98□□□□□ -0.33
VMP1-209ENST00000588915 SLC6A12P48065 614 aa12.98□□□□□ -0.33
VMP1-209ENST00000588915 ART1P52961 327 aa12.98□□□□□ -0.33
VMP1-209ENST00000588915 MTTPP55157 894 aa12.98□□□□□ -0.33
VMP1-209ENST00000588915 TGM3Q08188 693 aa12.98□□□□□ -0.33
VMP1-209ENST00000588915 BMPR2Q13873 1038 aa12.98□□□□□ -0.33
VMP1-209ENST00000588915 XKR6Q5GH73 641 aa12.98□□□□□ -0.33
VMP1-209ENST00000588915 STEAP4Q687X5 459 aa12.98□□□□□ -0.33
VMP1-209ENST00000588915 TRIM40Q6P9F5 258 aa12.98□□□□□ -0.33
VMP1-209ENST00000588915 IL20RBQ6UXL0 311 aa12.98□□□□□ -0.33
VMP1-209ENST00000588915 RTL4Q6ZR62 310 aa12.98□□□□□ -0.33
VMP1-209ENST00000588915 CCDC71Q8IV32 467 aaPredicted RBP12.98□□□□□ -0.33
VMP1-209ENST00000588915 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.98□□□□□ -0.33
VMP1-209ENST00000588915 OR5L2Q8NGL0 311 aa12.98□□□□□ -0.33
VMP1-209ENST00000588915 OR5M3Q8NGP4 307 aa12.98□□□□□ -0.33
VMP1-209ENST00000588915 OR14A16Q8NHC5 309 aa12.98□□□□□ -0.33
VMP1-209ENST00000588915 NINJ1Q92982 152 aa12.98□□□□□ -0.33
VMP1-209ENST00000588915 KIAA1191Q96A73 305 aa12.98□□□□□ -0.33
VMP1-209ENST00000588915 SMC6Q96SB8 1091 aa12.98□□□□□ -0.33
VMP1-209ENST00000588915 FAM173AQ9BQD7 235 aa12.98□□□□□ -0.33
VMP1-209ENST00000588915 TTYH2Q9BSA4 534 aa12.98□□□□□ -0.33
VMP1-209ENST00000588915 TTTY12Q9BZ98 90 aa12.98□□□□□ -0.33
VMP1-209ENST00000588915 REXO4Q9GZR2 422 aaKnown RBP12.98□□□□□ -0.33
VMP1-209ENST00000588915 IL1RL2Q9HB29 575 aa12.98□□□□□ -0.33
VMP1-209ENST00000588915 IKZF3Q9UKT9 509 aa12.98□□□□□ -0.33
VMP1-209ENST00000588915 FAM47E-STBD1D6RA91 191 aa12.97□□□□□ -0.33
VMP1-209ENST00000588915 CDC7O00311 574 aa12.97□□□□□ -0.33
VMP1-209ENST00000588915 AQP7O14520 342 aa12.97□□□□□ -0.33
VMP1-209ENST00000588915 WDR1O75083 606 aa12.97□□□□□ -0.33
VMP1-209ENST00000588915 BANF1O75531 89 aa12.97□□□□□ -0.33
VMP1-209ENST00000588915 WDR47O94967 919 aa12.97□□□□□ -0.33
VMP1-209ENST00000588915 OR6B1O95007 311 aa12.97□□□□□ -0.33
VMP1-209ENST00000588915 IFNA16P05015 189 aa12.97□□□□□ -0.33
VMP1-209ENST00000588915 IVDP26440 423 aa12.97□□□□□ -0.33
VMP1-209ENST00000588915 PEX19P40855 299 aa12.97□□□□□ -0.33
VMP1-209ENST00000588915 SOX3P41225 446 aa12.97□□□□□ -0.33
VMP1-209ENST00000588915 ELK3P41970 407 aa12.97□□□□□ -0.33
VMP1-209ENST00000588915 PGGT1BP53609 377 aa12.97□□□□□ -0.33
VMP1-209ENST00000588915 LIM2P55344 173 aa12.97□□□□□ -0.33
VMP1-209ENST00000588915 TBL3Q12788 808 aaKnown RBP12.97□□□□□ -0.33
VMP1-209ENST00000588915 BIKQ13323 160 aa12.97□□□□□ -0.33
VMP1-209ENST00000588915 SERTAD2Q14140 314 aa12.97□□□□□ -0.33
VMP1-209ENST00000588915 SLBPQ14493 270 aaKnown RBP eCLIP12.97□□□□□ -0.33
VMP1-209ENST00000588915 MORF4L2Q15014 288 aa12.97□□□□□ -0.33
VMP1-209ENST00000588915 CDKL4Q5MAI5 379 aa12.97□□□□□ -0.33
VMP1-209ENST00000588915 ABHD17CQ6PCB6 329 aa12.97□□□□□ -0.33
VMP1-209ENST00000588915 TRMT10BQ6PF06 316 aaKnown RBP12.97□□□□□ -0.33
VMP1-209ENST00000588915 OPN5Q6U736 354 aa12.97□□□□□ -0.33
VMP1-209ENST00000588915 B3GNT6Q6ZMB0 384 aa12.97□□□□□ -0.33
VMP1-209ENST00000588915 FRA10AC1Q70Z53 315 aa12.97□□□□□ -0.33
VMP1-209ENST00000588915 TRILQ7L0X0 811 aa12.97□□□□□ -0.33
VMP1-209ENST00000588915 TCAIMQ8N3R3 496 aa12.97□□□□□ -0.33
VMP1-209ENST00000588915 FAM109AQ8N4B1 249 aa12.97□□□□□ -0.33
VMP1-209ENST00000588915 RPRMLQ8N4K4 120 aa12.97□□□□□ -0.33
VMP1-209ENST00000588915 TMEM52Q8NDY8 209 aa12.97□□□□□ -0.33
VMP1-209ENST00000588915 SRFBP1Q8NEF9 429 aaKnown RBP12.97□□□□□ -0.33
VMP1-209ENST00000588915 PTPMT1Q8WUK0 201 aaPredicted RBP12.97□□□□□ -0.33
VMP1-209ENST00000588915 CCT6BQ92526 530 aa12.97□□□□□ -0.33
VMP1-209ENST00000588915 RHBDF1Q96CC6 855 aa12.97□□□□□ -0.33
VMP1-209ENST00000588915 VPS39Q96JC1 886 aa12.97□□□□□ -0.33
VMP1-209ENST00000588915 OSBPL9Q96SU4 736 aa12.97□□□□□ -0.33
VMP1-209ENST00000588915 ALOXE3Q9BYJ1 711 aa12.97□□□□□ -0.33
VMP1-209ENST00000588915 ROGDIQ9GZN7 287 aa12.97□□□□□ -0.33
VMP1-209ENST00000588915 CXXC4Q9H2H0 198 aa12.97□□□□□ -0.33
VMP1-209ENST00000588915 POPDC3Q9HBV1 291 aa12.97□□□□□ -0.33
VMP1-209ENST00000588915 PNPLA3Q9NST1 481 aa12.97□□□□□ -0.33
VMP1-209ENST00000588915 CTNNAL1Q9UBT7 734 aa12.97□□□□□ -0.33
VMP1-209ENST00000588915 PCDHGB3Q9Y5G1 929 aa12.97□□□□□ -0.33
VMP1-209ENST00000588915 TEX264Q9Y6I9 313 aa12.97□□□□□ -0.33
VMP1-209ENST00000588915 PINLYPA6NC86 204 aa12.96□□□□□ -0.33
VMP1-209ENST00000588915 WWP2O00308 870 aa12.96□□□□□ -0.33
VMP1-209ENST00000588915 HCN1O60741 890 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms