RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 TAS2R7Q9NYW3 318 aa9.9□□□□□ -0.82
LIG3-203ENST00000585370 SLC25A37Q9NYZ2 338 aa9.9□□□□□ -0.82
LIG3-203ENST00000585370 ACTR10Q9NZ32 417 aa9.9□□□□□ -0.82
LIG3-203ENST00000585370 APOBEC3BQ9UH17 382 aaKnown RBP9.9□□□□□ -0.82
LIG3-203ENST00000585370 VPS4AQ9UN37 437 aa9.9□□□□□ -0.82
LIG3-203ENST00000585370 PCDHGA4Q9Y5G9 962 aa9.9□□□□□ -0.82
LIG3-203ENST00000585370 IGSF10Q6WRI0 2623 aa9.89□□□□□ -0.83
LIG3-203ENST00000585370 ASXL3Q9C0F0 2248 aa9.89□□□□□ -0.83
LIG3-203ENST00000585370 TRBV23OR9-2A0A075B6M9 112 aa9.89□□□□□ -0.83
LIG3-203ENST00000585370 DHRS12A0PJE2 317 aa9.89□□□□□ -0.83
LIG3-203ENST00000585370 OR2A25A4D2G3 310 aa9.89□□□□□ -0.83
LIG3-203ENST00000585370 CLIC1O00299 241 aa9.89□□□□□ -0.83
LIG3-203ENST00000585370 VILLO15195 856 aa9.89□□□□□ -0.83
LIG3-203ENST00000585370 SH3BGRLO75368 114 aa9.89□□□□□ -0.83
LIG3-203ENST00000585370 ANXA6P08133 673 aa9.89□□□□□ -0.83
LIG3-203ENST00000585370 ZNF883P0CG24 379 aa9.89□□□□□ -0.83
LIG3-203ENST00000585370 PIM1P11309 404 aaPredicted RBP9.89□□□□□ -0.83
LIG3-203ENST00000585370 IL1RNP18510 177 aa9.89□□□□□ -0.83
LIG3-203ENST00000585370 DDCP20711 480 aa9.89□□□□□ -0.83
LIG3-203ENST00000585370 BCL6P41182 706 aa9.89□□□□□ -0.83
LIG3-203ENST00000585370 POLE2P56282 527 aa9.89□□□□□ -0.83
LIG3-203ENST00000585370 MTPNP58546 118 aa9.89□□□□□ -0.83
LIG3-203ENST00000585370 PLIN5Q00G26 463 aa9.89□□□□□ -0.83
LIG3-203ENST00000585370 KLC1Q07866 573 aa9.89□□□□□ -0.83
LIG3-203ENST00000585370 GPR18Q14330 331 aa9.89□□□□□ -0.83
LIG3-203ENST00000585370 SLC9A5Q14940 896 aa9.89□□□□□ -0.83
LIG3-203ENST00000585370 OGFRL1Q5TC84 451 aaPredicted RBP9.89□□□□□ -0.83
LIG3-203ENST00000585370 KIAA1614Q5VZ46 1190 aa9.89□□□□□ -0.83
LIG3-203ENST00000585370 TRIM40Q6P9F5 258 aa9.89□□□□□ -0.83
LIG3-203ENST00000585370 CYP2R1Q6VVX0 501 aa9.89□□□□□ -0.83
LIG3-203ENST00000585370 OOSP2Q86WS3 158 aa9.89□□□□□ -0.83
LIG3-203ENST00000585370 SPPL2CQ8IUH8 684 aa9.89□□□□□ -0.83
LIG3-203ENST00000585370 MSRB3Q8IXL7 192 aa9.89□□□□□ -0.83
LIG3-203ENST00000585370 NAGSQ8N159 534 aa9.89□□□□□ -0.83
LIG3-203ENST00000585370 ZCCHC7Q8N3Z6 543 aaKnown RBP9.89□□□□□ -0.83
LIG3-203ENST00000585370 ZNF655Q8N720 491 aaPredicted RBP9.89□□□□□ -0.83
LIG3-203ENST00000585370 PAPD5Q8NDF8 572 aaKnown RBP9.89□□□□□ -0.83
LIG3-203ENST00000585370 FAM46DQ8NEK8 389 aa9.89□□□□□ -0.83
LIG3-203ENST00000585370 OR2L5Q8NG80 312 aa9.89□□□□□ -0.83
LIG3-203ENST00000585370 OR10A6Q8NH74 314 aa9.89□□□□□ -0.83
LIG3-203ENST00000585370 BAHD1Q8TBE0 780 aaPredicted RBP9.89□□□□□ -0.83
LIG3-203ENST00000585370 NT5CQ8TCD5 201 aa9.89□□□□□ -0.83
LIG3-203ENST00000585370 NRG4Q8WWG1 115 aa9.89□□□□□ -0.83
LIG3-203ENST00000585370 TM4SF18Q96CE8 201 aa9.89□□□□□ -0.83
LIG3-203ENST00000585370 REXO5Q96IC2 774 aaKnown RBP9.89□□□□□ -0.83
LIG3-203ENST00000585370 KCNC2Q96PR1 638 aa9.89□□□□□ -0.83
LIG3-203ENST00000585370 OR2A14Q96R47 310 aa9.89□□□□□ -0.83
LIG3-203ENST00000585370 TACO1Q9BSH4 297 aaKnown RBP9.89□□□□□ -0.83
LIG3-203ENST00000585370 INPP5KQ9BT40 448 aa9.89□□□□□ -0.83
LIG3-203ENST00000585370 UGT2B28Q9BY64 529 aa9.89□□□□□ -0.83
LIG3-203ENST00000585370 VCXQ9H320 206 aa9.89□□□□□ -0.83
LIG3-203ENST00000585370 TM9SF3Q9HD45 589 aa9.89□□□□□ -0.83
LIG3-203ENST00000585370 MIEF1Q9NQG6 463 aa9.89□□□□□ -0.83
LIG3-203ENST00000585370 C8orf4Q9NR00 106 aa9.89□□□□□ -0.83
LIG3-203ENST00000585370 TOR4AQ9NXH8 423 aa9.89□□□□□ -0.83
LIG3-203ENST00000585370 EHD3Q9NZN3 535 aa9.89□□□□□ -0.83
LIG3-203ENST00000585370 EGFL7Q9UHF1 273 aa9.89□□□□□ -0.83
LIG3-203ENST00000585370 CNOT11Q9UKZ1 510 aaKnown RBP9.89□□□□□ -0.83
LIG3-203ENST00000585370 DOLKQ9UPQ8 538 aa9.89□□□□□ -0.83
LIG3-203ENST00000585370 PCDHGB2Q9Y5G2 931 aa9.89□□□□□ -0.83
LIG3-203ENST00000585370 URB1O60287 2271 aaKnown RBP9.89□□□□□ -0.83
LIG3-203ENST00000585370 PRAMEF33A0A0G2JMD5 474 aa9.88□□□□□ -0.83
LIG3-203ENST00000585370 OR6C74A6NCV1 312 aa9.88□□□□□ -0.83
LIG3-203ENST00000585370 H0YJX3 145 aa9.88□□□□□ -0.83
LIG3-203ENST00000585370 SAP18O00422 153 aaKnown RBP9.88□□□□□ -0.83
LIG3-203ENST00000585370 HAT1O14929 419 aa9.88□□□□□ -0.83
LIG3-203ENST00000585370 KLHL18O94889 574 aa9.88□□□□□ -0.83
LIG3-203ENST00000585370 DKK1O94907 266 aa9.88□□□□□ -0.83
LIG3-203ENST00000585370 CPSF4O95639 269 aaKnown RBP9.88□□□□□ -0.83
LIG3-203ENST00000585370 KRT75O95678 551 aa9.88□□□□□ -0.83
LIG3-203ENST00000585370 CER1O95813 267 aa9.88□□□□□ -0.83
LIG3-203ENST00000585370 TBX6O95947 436 aaPredicted RBP9.88□□□□□ -0.83
LIG3-203ENST00000585370 IL3P08700 152 aa9.88□□□□□ -0.83
LIG3-203ENST00000585370 UGT2B7P16662 529 aa9.88□□□□□ -0.83
LIG3-203ENST00000585370 ATP6V1B2P21281 511 aa9.88□□□□□ -0.83
LIG3-203ENST00000585370 ATP6V1C1P21283 382 aa9.88□□□□□ -0.83
LIG3-203ENST00000585370 ZNF10P21506 573 aaPredicted RBP9.88□□□□□ -0.83
LIG3-203ENST00000585370 SSR2P43308 183 aa9.88□□□□□ -0.83
LIG3-203ENST00000585370 MAGEA8P43361 318 aa9.88□□□□□ -0.83
LIG3-203ENST00000585370 FASLGP48023 281 aa9.88□□□□□ -0.83
LIG3-203ENST00000585370 ERFP50548 548 aa9.88□□□□□ -0.83
LIG3-203ENST00000585370 GZMMP51124 257 aa9.88□□□□□ -0.83
LIG3-203ENST00000585370 AFF3P51826 1226 aaKnown RBP9.88□□□□□ -0.83
LIG3-203ENST00000585370 OR4D2P58180 307 aa9.88□□□□□ -0.83
LIG3-203ENST00000585370 NXPH1P58417 271 aa9.88□□□□□ -0.83
LIG3-203ENST00000585370 YBX1P67809 324 aaKnown RBP9.88□□□□□ -0.83
LIG3-203ENST00000585370 CYP4F2P78329 520 aa9.88□□□□□ -0.83
LIG3-203ENST00000585370 HHEXQ03014 270 aa9.88□□□□□ -0.83
LIG3-203ENST00000585370 SELPLGQ14242 412 aa9.88□□□□□ -0.83
LIG3-203ENST00000585370 MLC1Q15049 377 aa9.88□□□□□ -0.83
LIG3-203ENST00000585370 TAF11Q15544 211 aa9.88□□□□□ -0.83
LIG3-203ENST00000585370 TEAD4Q15561 434 aa9.88□□□□□ -0.83
LIG3-203ENST00000585370 TRIP10Q15642 601 aa9.88□□□□□ -0.83
LIG3-203ENST00000585370 CYP51A1Q16850 503 aa9.88□□□□□ -0.83
LIG3-203ENST00000585370 FAM98BQ52LJ0 330 aaKnown RBP9.88□□□□□ -0.83
LIG3-203ENST00000585370 SWT1Q5T5J6 900 aaKnown RBP9.88□□□□□ -0.83
LIG3-203ENST00000585370 CPZQ66K79 652 aa9.88□□□□□ -0.83
LIG3-203ENST00000585370 FIGLAQ6QHK4 219 aa9.88□□□□□ -0.83
LIG3-203ENST00000585370 SPESP1Q6UW49 350 aa9.88□□□□□ -0.83
LIG3-203ENST00000585370 RNF111Q6ZNA4 994 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms