RNA–Protein interactions for RNA: ENST00000585335.1

SCAMP4-209, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-209ENST00000585335 TMED5Q9Y3A6 229 aa13.78□□□□□ -0.2
SCAMP4-209ENST00000585335 A0A0A6YYD5 115 aa13.77□□□□□ -0.21
SCAMP4-209ENST00000585335 SYNDIG1LA6NDD5 238 aa13.77□□□□□ -0.21
SCAMP4-209ENST00000585335 ZNF891A8MT65 544 aaPredicted RBP13.77□□□□□ -0.21
SCAMP4-209ENST00000585335 NPIPB8E9PQR5 432 aa13.77□□□□□ -0.21
SCAMP4-209ENST00000585335 TERTO14746 1132 aaKnown RBP13.77□□□□□ -0.21
SCAMP4-209ENST00000585335 PCDH17O14917 1159 aa13.77□□□□□ -0.21
SCAMP4-209ENST00000585335 PCDH7O60245 1069 aa13.77□□□□□ -0.21
SCAMP4-209ENST00000585335 EEDO75530 441 aaKnown RBP13.77□□□□□ -0.21
SCAMP4-209ENST00000585335 CREG1O75629 220 aa13.77□□□□□ -0.21
SCAMP4-209ENST00000585335 BMP10O95393 424 aa13.77□□□□□ -0.21
SCAMP4-209ENST00000585335 KITP10721 976 aa13.77□□□□□ -0.21
SCAMP4-209ENST00000585335 TIA1P31483 386 aaKnown RBP eCLIP13.77□□□□□ -0.21
SCAMP4-209ENST00000585335 MDH1P40925 334 aaKnown RBP13.77□□□□□ -0.21
SCAMP4-209ENST00000585335 TRA2BP62995 288 aaKnown RBP13.77□□□□□ -0.21
SCAMP4-209ENST00000585335 MAD2L1Q13257 205 aaPredicted RBP13.77□□□□□ -0.21
SCAMP4-209ENST00000585335 RUNX2Q13950 521 aa13.77□□□□□ -0.21
SCAMP4-209ENST00000585335 VWA2Q5GFL6 755 aa13.77□□□□□ -0.21
SCAMP4-209ENST00000585335 XKR7Q5GH72 579 aa13.77□□□□□ -0.21
SCAMP4-209ENST00000585335 ATG14Q6ZNE5 492 aa13.77□□□□□ -0.21
SCAMP4-209ENST00000585335 RAB43Q86YS6 212 aa13.77□□□□□ -0.21
SCAMP4-209ENST00000585335 PRSS58Q8IYP2 241 aa13.77□□□□□ -0.21
SCAMP4-209ENST00000585335 C7orf57Q8NEG2 295 aa13.77□□□□□ -0.21
SCAMP4-209ENST00000585335 METTL21AQ8WXB1 218 aa13.77□□□□□ -0.21
SCAMP4-209ENST00000585335 AHCTF1Q8WYP5 2266 aa13.77□□□□□ -0.21
SCAMP4-209ENST00000585335 STARD8Q92502 1023 aa13.77□□□□□ -0.21
SCAMP4-209ENST00000585335 TUBGCP3Q96CW5 907 aa13.77□□□□□ -0.21
SCAMP4-209ENST00000585335 SLC45A3Q96JT2 553 aa13.77□□□□□ -0.21
SCAMP4-209ENST00000585335 FAIM2Q9BWQ8 316 aa13.77□□□□□ -0.21
SCAMP4-209ENST00000585335 ZNF717Q9BY31 904 aaPredicted RBP13.77□□□□□ -0.21
SCAMP4-209ENST00000585335 SOX17Q9H6I2 414 aaPredicted RBP13.77□□□□□ -0.21
SCAMP4-209ENST00000585335 SEMA3GQ9NS98 782 aa13.77□□□□□ -0.21
SCAMP4-209ENST00000585335 SIRT5Q9NXA8 310 aa13.77□□□□□ -0.21
SCAMP4-209ENST00000585335 MARCOQ9UEW3 520 aaPredicted RBP13.77□□□□□ -0.21
SCAMP4-209ENST00000585335 FBXW2Q9UKT8 454 aa13.77□□□□□ -0.21
SCAMP4-209ENST00000585335 MKL2Q9ULH7 1088 aa13.77□□□□□ -0.21
SCAMP4-209ENST00000585335 PTGDR2Q9Y5Y4 395 aa13.77□□□□□ -0.21
SCAMP4-209ENST00000585335 SCN3AQ9NY46 2000 aa13.76□□□□□ -0.21
SCAMP4-209ENST00000585335 RECKO95980 971 aa13.76□□□□□ -0.21
SCAMP4-209ENST00000585335 GBAP04062 536 aa13.76□□□□□ -0.21
SCAMP4-209ENST00000585335 NR2F6P10588 404 aa13.76□□□□□ -0.21
SCAMP4-209ENST00000585335 PPP2R1BP30154 601 aa13.76□□□□□ -0.21
SCAMP4-209ENST00000585335 EMP2P54851 167 aa13.76□□□□□ -0.21
SCAMP4-209ENST00000585335 TNFRSF17Q02223 184 aa13.76□□□□□ -0.21
SCAMP4-209ENST00000585335 KLC1Q07866 573 aa13.76□□□□□ -0.21
SCAMP4-209ENST00000585335 SSPNQ14714 243 aa13.76□□□□□ -0.21
SCAMP4-209ENST00000585335 GALNTL6Q49A17 601 aa13.76□□□□□ -0.21
SCAMP4-209ENST00000585335 FAM219BQ5XKK7 198 aa13.76□□□□□ -0.21
SCAMP4-209ENST00000585335 GALNT18Q6P9A2 607 aa13.76□□□□□ -0.21
SCAMP4-209ENST00000585335 CCDC81Q6ZN84 652 aa13.76□□□□□ -0.21
SCAMP4-209ENST00000585335 FAM47EQ6ZV65 393 aa13.76□□□□□ -0.21
SCAMP4-209ENST00000585335 PARP9Q8IXQ6 854 aa13.76□□□□□ -0.21
SCAMP4-209ENST00000585335 ZNF595Q8IYB9 648 aa13.76□□□□□ -0.21
SCAMP4-209ENST00000585335 FAM47BQ8NA70 645 aa13.76□□□□□ -0.21
SCAMP4-209ENST00000585335 APIPQ96GX9 242 aa13.76□□□□□ -0.21
SCAMP4-209ENST00000585335 IP6K3Q96PC2 410 aa13.76□□□□□ -0.21
SCAMP4-209ENST00000585335 SPSB2Q99619 263 aa13.76□□□□□ -0.21
SCAMP4-209ENST00000585335 MAPKAP1Q9BPZ7 522 aa13.76□□□□□ -0.21
SCAMP4-209ENST00000585335 RBCK1Q9BYM8 510 aa13.76□□□□□ -0.21
SCAMP4-209ENST00000585335 NUF2Q9BZD4 464 aa13.76□□□□□ -0.21
SCAMP4-209ENST00000585335 IL17BQ9UHF5 180 aa13.76□□□□□ -0.21
SCAMP4-209ENST00000585335 C3orf18Q9UK00 162 aa13.76□□□□□ -0.21
SCAMP4-209ENST00000585335 MMACHCQ9Y4U1 282 aa13.76□□□□□ -0.21
SCAMP4-209ENST00000585335 SEC16AO15027 2179 aa13.76□□□□□ -0.21
SCAMP4-209ENST00000585335 CEP295Q9C0D2 2601 aa13.76□□□□□ -0.21
SCAMP4-209ENST00000585335 AKAP13Q12802 2813 aa13.75□□□□□ -0.21
SCAMP4-209ENST00000585335 FER1L5A0AVI2 2057 aa13.75□□□□□ -0.21
SCAMP4-209ENST00000585335 A0A087WV48 116 aa13.75□□□□□ -0.21
SCAMP4-209ENST00000585335 ATP6AP2A0A1C7CYW4 349 aa13.75□□□□□ -0.21
SCAMP4-209ENST00000585335 IDSB3KWA1 339 aa13.75□□□□□ -0.21
SCAMP4-209ENST00000585335 TCP11X1B4DZS4 312 aa13.75□□□□□ -0.21
SCAMP4-209ENST00000585335 LSM1O15116 133 aaKnown RBP13.75□□□□□ -0.21
SCAMP4-209ENST00000585335 TMPRSS11DO60235 418 aa13.75□□□□□ -0.21
SCAMP4-209ENST00000585335 PRMT3O60678 531 aa13.75□□□□□ -0.21
SCAMP4-209ENST00000585335 B4GALT2O60909 372 aa13.75□□□□□ -0.21
SCAMP4-209ENST00000585335 PEX11AO75192 247 aa13.75□□□□□ -0.21
SCAMP4-209ENST00000585335 ATP6AP2O75787 350 aa13.75□□□□□ -0.21
SCAMP4-209ENST00000585335 CDC123O75794 336 aaPredicted RBP13.75□□□□□ -0.21
SCAMP4-209ENST00000585335 KLF7O75840 302 aaPredicted RBP13.75□□□□□ -0.21
SCAMP4-209ENST00000585335 ANXA4P09525 319 aaPredicted RBP13.75□□□□□ -0.21
SCAMP4-209ENST00000585335 F8A1P23610 371 aa13.75□□□□□ -0.21
SCAMP4-209ENST00000585335 TPP2P29144 1249 aaPredicted RBP13.75□□□□□ -0.21
SCAMP4-209ENST00000585335 HSD17B7P56937 341 aa13.75□□□□□ -0.21
SCAMP4-209ENST00000585335 TMPRSS3P57727 454 aa13.75□□□□□ -0.21
SCAMP4-209ENST00000585335 RPS18P62269 152 aaKnown RBP13.75□□□□□ -0.21
SCAMP4-209ENST00000585335 RPL38P63173 70 aaKnown RBP13.75□□□□□ -0.21
SCAMP4-209ENST00000585335 GUCY1A3Q02108 690 aa13.75□□□□□ -0.21
SCAMP4-209ENST00000585335 ZNF763Q0D2J5 394 aa13.75□□□□□ -0.21
SCAMP4-209ENST00000585335 SLC13A2Q13183 592 aa13.75□□□□□ -0.21
SCAMP4-209ENST00000585335 SMU1Q2TAY7 513 aa13.75□□□□□ -0.21
SCAMP4-209ENST00000585335 MRM1Q6IN84 353 aaKnown RBP13.75□□□□□ -0.21
SCAMP4-209ENST00000585335 SHISA6Q6ZSJ9 500 aa13.75□□□□□ -0.21
SCAMP4-209ENST00000585335 Q6ZSR9 355 aa13.75□□□□□ -0.21
SCAMP4-209ENST00000585335 LRRC34Q8IZ02 419 aa13.75□□□□□ -0.21
SCAMP4-209ENST00000585335 FNDC5Q8NAU1 212 aa13.75□□□□□ -0.21
SCAMP4-209ENST00000585335 OR2T11Q8NH01 316 aa13.75□□□□□ -0.21
SCAMP4-209ENST00000585335 NACC2Q96BF6 587 aa13.75□□□□□ -0.21
SCAMP4-209ENST00000585335 PPP1R36Q96LQ0 422 aa13.75□□□□□ -0.21
SCAMP4-209ENST00000585335 MEAF6Q9HAF1 191 aa13.75□□□□□ -0.21
SCAMP4-209ENST00000585335 SLCO1B3Q9NPD5 702 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms