RNA–Protein interactions for RNA: ENST00000582892.1

NF1-222, Transcript of neurofibromin 1, human

TSL 4

Gene NF1, Length 462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NF1-222	ENST00000582892	HECA	Q9UBI9	543 aa	Predicted RBP	7.08	□□□□□ -1.28
NF1-222	ENST00000582892	POLG2	Q9UHN1	485 aa		7.08	□□□□□ -1.28
NF1-222	ENST00000582892	LEF1	Q9UJU2	399 aa	Predicted RBP	7.08	□□□□□ -1.28
NF1-222	ENST00000582892	PCTP	Q9UKL6	214 aa		7.08	□□□□□ -1.28
NF1-222	ENST00000582892	DHRS7	Q9Y394	339 aa		7.08	□□□□□ -1.28
NF1-222	ENST00000582892	PLEKHM1	Q9Y4G2	1056 aa		7.08	□□□□□ -1.28
NF1-222	ENST00000582892	PCDHA9	Q9Y5H5	950 aa		7.08	□□□□□ -1.28
NF1-222	ENST00000582892	SPO11	Q9Y5K1	396 aa		7.08	□□□□□ -1.28
NF1-222	ENST00000582892	CNTRL	Q7Z7A1	2325 aa		7.08	□□□□□ -1.28
NF1-222	ENST00000582892	CACNA1C	Q13936	2221 aa		7.08	□□□□□ -1.28
NF1-222	ENST00000582892	SPTB	P11277	2137 aa		7.07	□□□□□ -1.28
NF1-222	ENST00000582892	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	7.07	□□□□□ -1.28
NF1-222	ENST00000582892	UBA6	A0AVT1	1052 aa	Predicted RBP	7.07	□□□□□ -1.28
NF1-222	ENST00000582892	DHRS12	A0PJE2	317 aa		7.07	□□□□□ -1.28
NF1-222	ENST00000582892	PIPSL	A2A3N6	862 aa		7.07	□□□□□ -1.28
NF1-222	ENST00000582892		A6NCN8	305 aa		7.07	□□□□□ -1.28
NF1-222	ENST00000582892	ANKUB1	A6NFN9	424 aa		7.07	□□□□□ -1.28
NF1-222	ENST00000582892	TRIM64	A6NGJ6	449 aa		7.07	□□□□□ -1.28
NF1-222	ENST00000582892	ARGFX	A6NJG6	315 aa		7.07	□□□□□ -1.28
NF1-222	ENST00000582892	ZNF701	M0R085	212 aa	Predicted RBP	7.07	□□□□□ -1.28
NF1-222	ENST00000582892	EIF3F	O00303	357 aa	Predicted RBP	7.07	□□□□□ -1.28
NF1-222	ENST00000582892	CCL22	O00626	93 aa		7.07	□□□□□ -1.28
NF1-222	ENST00000582892	NME4	O00746	187 aa		7.07	□□□□□ -1.28
NF1-222	ENST00000582892	PRMT5	O14744	637 aa	Predicted RBP	7.07	□□□□□ -1.28
NF1-222	ENST00000582892	LRRTM2	O43300	516 aa		7.07	□□□□□ -1.28
NF1-222	ENST00000582892	SNX2	O60749	519 aa		7.07	□□□□□ -1.28
NF1-222	ENST00000582892	CRCP	O75575	148 aa		7.07	□□□□□ -1.28
NF1-222	ENST00000582892	WDR47	O94967	919 aa		7.07	□□□□□ -1.28
NF1-222	ENST00000582892	SIX3	O95343	332 aa	Predicted RBP	7.07	□□□□□ -1.28
NF1-222	ENST00000582892	ENO2	P09104	434 aa	Predicted RBP	7.07	□□□□□ -1.28
NF1-222	ENST00000582892	ZNF23	P17027	643 aa		7.07	□□□□□ -1.28
NF1-222	ENST00000582892	CAPN3	P20807	821 aa		7.07	□□□□□ -1.28
NF1-222	ENST00000582892	FAS	P25445	335 aa		7.07	□□□□□ -1.28
NF1-222	ENST00000582892	PSMA4	P25789	261 aa	Known RBP	7.07	□□□□□ -1.28
NF1-222	ENST00000582892	HTR1E	P28566	365 aa		7.07	□□□□□ -1.28
NF1-222	ENST00000582892	FMO4	P31512	558 aa		7.07	□□□□□ -1.28
NF1-222	ENST00000582892	MC4R	P32245	332 aa		7.07	□□□□□ -1.28
NF1-222	ENST00000582892	HMGCL	P35914	325 aa		7.07	□□□□□ -1.28
NF1-222	ENST00000582892	SCNN1B	P51168	640 aa		7.07	□□□□□ -1.28
NF1-222	ENST00000582892	CCL11	P51671	97 aa		7.07	□□□□□ -1.28
NF1-222	ENST00000582892	CDH13	P55290	713 aa		7.07	□□□□□ -1.28
NF1-222	ENST00000582892	KCNK10	P57789	538 aa		7.07	□□□□□ -1.28
NF1-222	ENST00000582892	CDKL1	Q00532	357 aa		7.07	□□□□□ -1.28
NF1-222	ENST00000582892	MYBPC1	Q00872	1141 aa		7.07	□□□□□ -1.28
NF1-222	ENST00000582892	EMX2	Q04743	252 aa		7.07	□□□□□ -1.28
NF1-222	ENST00000582892	MAD2L1	Q13257	205 aa	Predicted RBP	7.07	□□□□□ -1.28
NF1-222	ENST00000582892	TRA2A	Q13595	282 aa	Known RBP eCLIP	7.07	□□□□□ -1.28
NF1-222	ENST00000582892	TSN	Q15631	228 aa	Known RBP	7.07	□□□□□ -1.28
NF1-222	ENST00000582892	ZNF805	Q5CZA5	627 aa		7.07	□□□□□ -1.28
NF1-222	ENST00000582892	ZRANB3	Q5FWF4	1079 aa		7.07	□□□□□ -1.28
NF1-222	ENST00000582892	TMTC4	Q5T4D3	741 aa		7.07	□□□□□ -1.28
NF1-222	ENST00000582892	GPRIN3	Q6ZVF9	776 aa		7.07	□□□□□ -1.28
NF1-222	ENST00000582892	DDIAS	Q8IXT1	998 aa		7.07	□□□□□ -1.28
NF1-222	ENST00000582892	TBC1D21	Q8IYX1	336 aa		7.07	□□□□□ -1.28
NF1-222	ENST00000582892	NAGS	Q8N159	534 aa		7.07	□□□□□ -1.28
NF1-222	ENST00000582892	CBARP	Q8N350	705 aa	Predicted RBP	7.07	□□□□□ -1.28
NF1-222	ENST00000582892	CISD2	Q8N5K1	135 aa	Known RBP	7.07	□□□□□ -1.28
NF1-222	ENST00000582892	RNF148	Q8N7C7	305 aa		7.07	□□□□□ -1.28
NF1-222	ENST00000582892	TRPV3	Q8NET8	790 aa		7.07	□□□□□ -1.28
NF1-222	ENST00000582892	TNIP2	Q8NFZ5	429 aa		7.07	□□□□□ -1.28
NF1-222	ENST00000582892	DNAJB8	Q8NHS0	232 aa		7.07	□□□□□ -1.28
NF1-222	ENST00000582892	CD200R1	Q8TD46	325 aa		7.07	□□□□□ -1.28
NF1-222	ENST00000582892	ADAMTS16	Q8TE57	1224 aa		7.07	□□□□□ -1.28
NF1-222	ENST00000582892	CXorf40A	Q8TE69	158 aa		7.07	□□□□□ -1.28
NF1-222	ENST00000582892	UBTD2	Q8WUN7	234 aa		7.07	□□□□□ -1.28
NF1-222	ENST00000582892	TMEM125	Q96AQ2	219 aa		7.07	□□□□□ -1.28
NF1-222	ENST00000582892	LRRC58	Q96CX6	371 aa		7.07	□□□□□ -1.28
NF1-222	ENST00000582892	CENPN	Q96H22	339 aa	Predicted RBP	7.07	□□□□□ -1.28
NF1-222	ENST00000582892	GPR21	Q99679	349 aa		7.07	□□□□□ -1.28
NF1-222	ENST00000582892	C9orf16	Q9BUW7	83 aa		7.07	□□□□□ -1.28
NF1-222	ENST00000582892	RBM38	Q9H0Z9	239 aa	Known RBP	7.07	□□□□□ -1.28
NF1-222	ENST00000582892	COQ10B	Q9H8M1	238 aa		7.07	□□□□□ -1.28
NF1-222	ENST00000582892	SLAMF7	Q9NQ25	335 aa		7.07	□□□□□ -1.28
NF1-222	ENST00000582892	ASIC5	Q9NY37	505 aa		7.07	□□□□□ -1.28
NF1-222	ENST00000582892	IL17C	Q9P0M4	197 aa		7.07	□□□□□ -1.28
NF1-222	ENST00000582892	LHX3	Q9UBR4	397 aa		7.07	□□□□□ -1.28
NF1-222	ENST00000582892	KLHL3	Q9UH77	587 aa		7.07	□□□□□ -1.28
NF1-222	ENST00000582892	MOSPD1	Q9UJG1	213 aa		7.07	□□□□□ -1.28
NF1-222	ENST00000582892	PACSIN3	Q9UKS6	424 aa		7.07	□□□□□ -1.28
NF1-222	ENST00000582892	CNOT6	Q9ULM6	557 aa	Known RBP	7.07	□□□□□ -1.28
NF1-222	ENST00000582892	FIS1	Q9Y3D6	152 aa		7.07	□□□□□ -1.28
NF1-222	ENST00000582892	SNX13	Q9Y5W8	968 aa		7.07	□□□□□ -1.28
NF1-222	ENST00000582892	DGKB	Q9Y6T7	804 aa		7.07	□□□□□ -1.28
NF1-222	ENST00000582892	AKAP6	Q13023	2319 aa		7.07	□□□□□ -1.28
NF1-222	ENST00000582892	CSPG4	Q6UVK1	2322 aa		7.07	□□□□□ -1.28
NF1-222	ENST00000582892	TRBV23OR9-2	A0A075B6M9	112 aa		7.06	□□□□□ -1.28
NF1-222	ENST00000582892	TRBV5-4	A0A0C4DH59	114 aa		7.06	□□□□□ -1.28
NF1-222	ENST00000582892	C7orf72	A4D263	438 aa		7.06	□□□□□ -1.28
NF1-222	ENST00000582892	NPEPPSL1	A6NEC2	478 aa		7.06	□□□□□ -1.28
NF1-222	ENST00000582892	PDLIM1	O00151	329 aa		7.06	□□□□□ -1.28
NF1-222	ENST00000582892	BTN3A1	O00481	513 aa		7.06	□□□□□ -1.28
NF1-222	ENST00000582892	NR5A2	O00482	541 aa		7.06	□□□□□ -1.28
NF1-222	ENST00000582892	E2F3	O00716	465 aa		7.06	□□□□□ -1.28
NF1-222	ENST00000582892	HTRA2	O43464	458 aa	Predicted RBP	7.06	□□□□□ -1.28
NF1-222	ENST00000582892	SOCS5	O75159	536 aa		7.06	□□□□□ -1.28
NF1-222	ENST00000582892	SLC22A3	O75751	556 aa		7.06	□□□□□ -1.28
NF1-222	ENST00000582892	TMCC1	O94876	653 aa		7.06	□□□□□ -1.28
NF1-222	ENST00000582892	BMP10	O95393	424 aa		7.06	□□□□□ -1.28
NF1-222	ENST00000582892	H6PD	O95479	791 aa		7.06	□□□□□ -1.28
NF1-222	ENST00000582892	ZNF7	P17097	686 aa	Predicted RBP	7.06	□□□□□ -1.28

Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms