RNA–Protein interactions for RNA: ENST00000581226.1

SMCHD1-204, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 459 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-204ENST00000581226 TRGV8A0A0C4DH27 118 aa3.64□□□□□ -1.83
SMCHD1-204ENST00000581226 SERINC4A6NH21 518 aa3.64□□□□□ -1.83
SMCHD1-204ENST00000581226 SLC33A1O00400 549 aaPredicted RBP3.64□□□□□ -1.83
SMCHD1-204ENST00000581226 B4GAT1O43505 415 aa3.64□□□□□ -1.83
SMCHD1-204ENST00000581226 GALR3O60755 368 aaPredicted RBP3.64□□□□□ -1.83
SMCHD1-204ENST00000581226 CALCAP01258 141 aa3.64□□□□□ -1.83
SMCHD1-204ENST00000581226 SKILP12757 684 aa3.64□□□□□ -1.83
SMCHD1-204ENST00000581226 IL4RP24394 825 aa3.64□□□□□ -1.83
SMCHD1-204ENST00000581226 SLC34A1Q06495 639 aa3.64□□□□□ -1.83
SMCHD1-204ENST00000581226 ZFP36L1Q07352 338 aaKnown RBP3.64□□□□□ -1.83
SMCHD1-204ENST00000581226 RBBP4Q09028 425 aa3.64□□□□□ -1.83
SMCHD1-204ENST00000581226 SIX1Q15475 284 aaPredicted RBP3.64□□□□□ -1.83
SMCHD1-204ENST00000581226 ACKR1Q16570 336 aa3.64□□□□□ -1.83
SMCHD1-204ENST00000581226 ZNF239Q16600 458 aaKnown RBP3.64□□□□□ -1.83
SMCHD1-204ENST00000581226 RFTN2Q52LD8 501 aaPredicted RBP3.64□□□□□ -1.83
SMCHD1-204ENST00000581226 LYPLAL1Q5VWZ2 237 aa3.64□□□□□ -1.83
SMCHD1-204ENST00000581226 SPINK14Q6IE38 97 aa3.64□□□□□ -1.83
SMCHD1-204ENST00000581226 ZNF774Q6NX45 483 aa3.64□□□□□ -1.83
SMCHD1-204ENST00000581226 C11orf88Q6PI97 169 aa3.64□□□□□ -1.83
SMCHD1-204ENST00000581226 TMEM64Q6YI46 380 aa3.64□□□□□ -1.83
SMCHD1-204ENST00000581226 NLRP14Q86W24 1093 aa3.64□□□□□ -1.83
SMCHD1-204ENST00000581226 CARM1Q86X55 608 aa3.64□□□□□ -1.83
SMCHD1-204ENST00000581226 ERC1Q8IUD2 1116 aa3.64□□□□□ -1.83
SMCHD1-204ENST00000581226 KLHDC8AQ8IYD2 350 aa3.64□□□□□ -1.83
SMCHD1-204ENST00000581226 ZNF444Q8N0Y2 327 aaPredicted RBP3.64□□□□□ -1.83
SMCHD1-204ENST00000581226 GPR148Q8TDV2 347 aa3.64□□□□□ -1.83
SMCHD1-204ENST00000581226 LIPHQ8WWY8 451 aa3.64□□□□□ -1.83
SMCHD1-204ENST00000581226 SNRNP40Q96DI7 357 aaKnown RBP3.64□□□□□ -1.83
SMCHD1-204ENST00000581226 JAKMIP1Q96N16 626 aaKnown RBP3.64□□□□□ -1.83
SMCHD1-204ENST00000581226 TAAR6Q96RI8 345 aa3.64□□□□□ -1.83
SMCHD1-204ENST00000581226 RPP25Q9BUL9 199 aaKnown RBP3.64□□□□□ -1.83
SMCHD1-204ENST00000581226 ADNPQ9H2P0 1102 aa3.64□□□□□ -1.83
SMCHD1-204ENST00000581226 DNAJC17Q9NVM6 304 aaKnown RBP3.64□□□□□ -1.83
SMCHD1-204ENST00000581226 ZNF319Q9P2F9 582 aa3.64□□□□□ -1.83
SMCHD1-204ENST00000581226 LEF1Q9UJU2 399 aaPredicted RBP3.64□□□□□ -1.83
SMCHD1-204ENST00000581226 ETV7Q9Y603 341 aa3.64□□□□□ -1.83
SMCHD1-204ENST00000581226 A0A087X0K7 114 aa3.63□□□□□ -1.83
SMCHD1-204ENST00000581226 H0YIG0 161 aa3.63□□□□□ -1.83
SMCHD1-204ENST00000581226 GLCEO94923 617 aa3.63□□□□□ -1.83
SMCHD1-204ENST00000581226 LYNP07948 512 aa3.63□□□□□ -1.83
SMCHD1-204ENST00000581226 GJB2P29033 226 aa3.63□□□□□ -1.83
SMCHD1-204ENST00000581226 TCF7P36402 384 aaPredicted RBP3.63□□□□□ -1.83
SMCHD1-204ENST00000581226 MAGEB1P43366 347 aa3.63□□□□□ -1.83
SMCHD1-204ENST00000581226 TNNT3P45378 269 aaPredicted RBP3.63□□□□□ -1.83
SMCHD1-204ENST00000581226 PEX3P56589 373 aa3.63□□□□□ -1.83
SMCHD1-204ENST00000581226 NFE2L1Q14494 772 aa3.63□□□□□ -1.83
SMCHD1-204ENST00000581226 ECSCRQ19T08 205 aa3.63□□□□□ -1.83
SMCHD1-204ENST00000581226 HIGD2BQ4VC39 106 aa3.63□□□□□ -1.83
SMCHD1-204ENST00000581226 CCDC184Q52MB2 194 aa3.63□□□□□ -1.83
SMCHD1-204ENST00000581226 ALKBH5Q6P6C2 394 aaKnown RBP3.63□□□□□ -1.83
SMCHD1-204ENST00000581226 LINC00696Q6ZRV3 163 aa3.63□□□□□ -1.83
SMCHD1-204ENST00000581226 TBC1D10CQ8IV04 446 aa3.63□□□□□ -1.83
SMCHD1-204ENST00000581226 SYCP3Q8IZU3 236 aa3.63□□□□□ -1.83
SMCHD1-204ENST00000581226 CLYBLQ8N0X4 340 aa3.63□□□□□ -1.83
SMCHD1-204ENST00000581226 C4orf32Q8N8J7 132 aa3.63□□□□□ -1.83
SMCHD1-204ENST00000581226 GDAP1Q8TB36 358 aa3.63□□□□□ -1.83
SMCHD1-204ENST00000581226 NABP1Q96AH0 204 aa3.63□□□□□ -1.83
SMCHD1-204ENST00000581226 CCDC28BQ9BUN5 200 aa3.63□□□□□ -1.83
SMCHD1-204ENST00000581226 LRRCC1Q9C099 1032 aa3.63□□□□□ -1.83
SMCHD1-204ENST00000581226 S100A14Q9HCY8 104 aa3.63□□□□□ -1.83
SMCHD1-204ENST00000581226 DEPPQ9NTK1 212 aa3.63□□□□□ -1.83
SMCHD1-204ENST00000581226 MED17Q9NVC6 651 aa3.63□□□□□ -1.83
SMCHD1-204ENST00000581226 UBQLN2Q9UHD9 624 aa3.63□□□□□ -1.83
SMCHD1-204ENST00000581226 SRRM5B3KS81 715 aa3.62□□□□□ -1.83
SMCHD1-204ENST00000581226 K7EQG2 157 aa3.62□□□□□ -1.83
SMCHD1-204ENST00000581226 FOLR2P14207 255 aa3.62□□□□□ -1.83
SMCHD1-204ENST00000581226 LMO2P25791 158 aa3.62□□□□□ -1.83
SMCHD1-204ENST00000581226 ZFP36L2P47974 494 aaKnown RBP3.62□□□□□ -1.83
SMCHD1-204ENST00000581226 ACY1Q03154 408 aa3.62□□□□□ -1.83
SMCHD1-204ENST00000581226 RIGQ13278 110 aa3.62□□□□□ -1.83
SMCHD1-204ENST00000581226 TYSND1Q2T9J0 566 aa3.62□□□□□ -1.83
SMCHD1-204ENST00000581226 KRT71Q3SY84 523 aa3.62□□□□□ -1.83
SMCHD1-204ENST00000581226 KBTBD12Q3ZCT8 623 aa3.62□□□□□ -1.83
SMCHD1-204ENST00000581226 ZNF789Q5FWF6 425 aa3.62□□□□□ -1.83
SMCHD1-204ENST00000581226 MUC21Q5SSG8 566 aa3.62□□□□□ -1.83
SMCHD1-204ENST00000581226 C9orf66Q5T8R8 295 aa3.62□□□□□ -1.83
SMCHD1-204ENST00000581226 RPAINQ86UA6 219 aa3.62□□□□□ -1.83
SMCHD1-204ENST00000581226 SIAH3Q8IW03 269 aa3.62□□□□□ -1.83
SMCHD1-204ENST00000581226 CCDC83Q8IWF9 413 aa3.62□□□□□ -1.83
SMCHD1-204ENST00000581226 BANPQ8N9N5 519 aa3.62□□□□□ -1.83
SMCHD1-204ENST00000581226 OR6F1Q8NGZ6 308 aa3.62□□□□□ -1.83
SMCHD1-204ENST00000581226 C8orf46Q8TAG6 207 aa3.62□□□□□ -1.83
SMCHD1-204ENST00000581226 PCNPQ8WW12 178 aaKnown RBP3.62□□□□□ -1.83
SMCHD1-204ENST00000581226 AP2M1Q96CW1 435 aa3.62□□□□□ -1.83
SMCHD1-204ENST00000581226 ANKRD27Q96NW4 1050 aa3.62□□□□□ -1.83
SMCHD1-204ENST00000581226 LRRC2Q9BYS8 371 aa3.62□□□□□ -1.83
SMCHD1-204ENST00000581226 ZNF350Q9GZX5 532 aa3.62□□□□□ -1.83
SMCHD1-204ENST00000581226 ZNF665Q9H7R5 613 aa3.62□□□□□ -1.83
SMCHD1-204ENST00000581226 SP140LQ9H930 580 aa3.62□□□□□ -1.83
SMCHD1-204ENST00000581226 ABCB8Q9NUT2 735 aa3.62□□□□□ -1.83
SMCHD1-204ENST00000581226 THYN1Q9P016 225 aa3.62□□□□□ -1.83
SMCHD1-204ENST00000581226 NIP7Q9Y221 180 aaKnown RBP eCLIP3.62□□□□□ -1.83
SMCHD1-204ENST00000581226 ACEP12821 1306 aa3.62□□□□□ -1.83
SMCHD1-204ENST00000581226 KIAA1217Q5T5P2 1943 aa3.62□□□□□ -1.83
SMCHD1-204ENST00000581226 TRBV5-4A0A0C4DH59 114 aa3.61□□□□□ -1.83
SMCHD1-204ENST00000581226 A0A0U1RQK1 487 aa3.61□□□□□ -1.83
SMCHD1-204ENST00000581226 C13orf42A0A1B0GVH6 325 aa3.61□□□□□ -1.83
SMCHD1-204ENST00000581226 ZNF320A2RRD8 509 aa3.61□□□□□ -1.83
SMCHD1-204ENST00000581226 GTPBP10A4D1E9 387 aaKnown RBP3.61□□□□□ -1.83
SMCHD1-204ENST00000581226 FAM149AA5PLN7 773 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms