RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 SNRPNP63162 240 aaKnown RBP14.68□□□□□ -0.06
SS18-216ENST00000580751 BTN3A2P78410 334 aa14.68□□□□□ -0.06
SS18-216ENST00000580751 OCA2Q04671 838 aa14.68□□□□□ -0.06
SS18-216ENST00000580751 TLE3Q04726 772 aa14.68□□□□□ -0.06
SS18-216ENST00000580751 ABRAXAS2Q15018 415 aa14.68□□□□□ -0.06
SS18-216ENST00000580751 GSTA3Q16772 222 aa14.68□□□□□ -0.06
SS18-216ENST00000580751 LSM12Q3MHD2 195 aaKnown RBP14.68□□□□□ -0.06
SS18-216ENST00000580751 ATP6AP1LQ52LC2 224 aa14.68□□□□□ -0.06
SS18-216ENST00000580751 SGO1Q5FBB7 561 aa14.68□□□□□ -0.06
SS18-216ENST00000580751 VWA5B1Q5TIE3 1220 aa14.68□□□□□ -0.06
SS18-216ENST00000580751 MRPL14Q6P1L8 145 aaKnown RBP14.68□□□□□ -0.06
SS18-216ENST00000580751 ABHD17CQ6PCB6 329 aa14.68□□□□□ -0.06
SS18-216ENST00000580751 Q6ZSR9 355 aa14.68□□□□□ -0.06
SS18-216ENST00000580751 CPSF7Q8N684 471 aaKnown RBP14.68□□□□□ -0.06
SS18-216ENST00000580751 RGMAQ96B86 450 aa14.68□□□□□ -0.06
SS18-216ENST00000580751 TUBGCP3Q96CW5 907 aa14.68□□□□□ -0.06
SS18-216ENST00000580751 MTFMTQ96DP5 389 aaKnown RBP14.68□□□□□ -0.06
SS18-216ENST00000580751 CNTNAP3BQ96NU0 1288 aa14.68□□□□□ -0.06
SS18-216ENST00000580751 TBCDQ9BTW9 1192 aa14.68□□□□□ -0.06
SS18-216ENST00000580751 TUBB6Q9BUF5 446 aa14.68□□□□□ -0.06
SS18-216ENST00000580751 CNTNAP3Q9BZ76 1288 aa14.68□□□□□ -0.06
SS18-216ENST00000580751 OR51B5Q9H339 312 aa14.68□□□□□ -0.06
SS18-216ENST00000580751 WDR55Q9H6Y2 383 aaPredicted RBP14.68□□□□□ -0.06
SS18-216ENST00000580751 AKTIPQ9H8T0 292 aa14.68□□□□□ -0.06
SS18-216ENST00000580751 MKKSQ9NPJ1 570 aaPredicted RBP14.68□□□□□ -0.06
SS18-216ENST00000580751 C14orf105Q9NVL8 296 aa14.68□□□□□ -0.06
SS18-216ENST00000580751 ASIC5Q9NY37 505 aa14.68□□□□□ -0.06
SS18-216ENST00000580751 TRPC4Q9UBN4 977 aa14.68□□□□□ -0.06
SS18-216ENST00000580751 FARSAQ9Y285 508 aaKnown RBP14.68□□□□□ -0.06
SS18-216ENST00000580751 IGLV3-12A0A075B6K2 115 aa14.67□□□□□ -0.06
SS18-216ENST00000580751 ZNF860A6NHJ4 632 aa14.67□□□□□ -0.06
SS18-216ENST00000580751 C4orf51C9J302 202 aa14.67□□□□□ -0.06
SS18-216ENST00000580751 B3GALT2O43825 422 aa14.67□□□□□ -0.06
SS18-216ENST00000580751 PDYNP01213 254 aa14.67□□□□□ -0.06
SS18-216ENST00000580751 LINC00032P0C843 101 aa14.67□□□□□ -0.06
SS18-216ENST00000580751 ATXN8OSP0DMR3 200 aa14.67□□□□□ -0.06
SS18-216ENST00000580751 MTTPP55157 894 aa14.67□□□□□ -0.06
SS18-216ENST00000580751 ERVK-8P63133 956 aa14.67□□□□□ -0.06
SS18-216ENST00000580751 EMX2Q04743 252 aa14.67□□□□□ -0.06
SS18-216ENST00000580751 IMPG1Q17R60 797 aa14.67□□□□□ -0.06
SS18-216ENST00000580751 AP5B1Q2VPB7 878 aa14.67□□□□□ -0.06
SS18-216ENST00000580751 TCHHL1Q5QJ38 904 aaPredicted RBP14.67□□□□□ -0.06
SS18-216ENST00000580751 C6orf89Q6UWU4 347 aa14.67□□□□□ -0.06
SS18-216ENST00000580751 TRPM8Q7Z2W7 1104 aa14.67□□□□□ -0.06
SS18-216ENST00000580751 RNF175Q8N4F7 328 aa14.67□□□□□ -0.06
SS18-216ENST00000580751 SLC45A3Q96JT2 553 aa14.67□□□□□ -0.06
SS18-216ENST00000580751 OR52B2Q96RD2 323 aa14.67□□□□□ -0.06
SS18-216ENST00000580751 SERINC2Q96SA4 455 aa14.67□□□□□ -0.06
SS18-216ENST00000580751 YIPF2Q9BWQ6 316 aa14.67□□□□□ -0.06
SS18-216ENST00000580751 NPLQ9BXD5 320 aaPredicted RBP14.67□□□□□ -0.06
SS18-216ENST00000580751 MYLK2Q9H1R3 596 aa14.67□□□□□ -0.06
SS18-216ENST00000580751 ACTL8Q9H568 366 aa14.67□□□□□ -0.06
SS18-216ENST00000580751 FARSBQ9NSD9 589 aaKnown RBP14.67□□□□□ -0.06
SS18-216ENST00000580751 SIRT5Q9NXA8 310 aa14.67□□□□□ -0.06
SS18-216ENST00000580751 AHSPQ9NZD4 102 aa14.67□□□□□ -0.06
SS18-216ENST00000580751 HCN3Q9P1Z3 774 aa14.67□□□□□ -0.06
SS18-216ENST00000580751 VPS29Q9UBQ0 182 aa14.67□□□□□ -0.06
SS18-216ENST00000580751 CTSFQ9UBX1 484 aa14.67□□□□□ -0.06
SS18-216ENST00000580751 ZMIZ1Q9ULJ6 1067 aa14.67□□□□□ -0.06
SS18-216ENST00000580751 PTPRQQ9UMZ3 2332 aa14.67□□□□□ -0.06
SS18-216ENST00000580751 DSPP15924 2871 aaKnown RBP14.67□□□□□ -0.06
SS18-216ENST00000580751 ZZEF1O43149 2961 aa14.67□□□□□ -0.06
SS18-216ENST00000580751 ZFHX4Q86UP3 3567 aa14.67□□□□□ -0.06
SS18-216ENST00000580751 LSM1O15116 133 aaKnown RBP14.66□□□□□ -0.06
SS18-216ENST00000580751 UBDO15205 165 aa14.66□□□□□ -0.06
SS18-216ENST00000580751 SH3BGRLO75368 114 aa14.66□□□□□ -0.06
SS18-216ENST00000580751 SCELO95171 688 aa14.66□□□□□ -0.06
SS18-216ENST00000580751 ETHE1O95571 254 aa14.66□□□□□ -0.06
SS18-216ENST00000580751 IDO1P14902 403 aa14.66□□□□□ -0.06
SS18-216ENST00000580751 IL10P22301 178 aa14.66□□□□□ -0.06
SS18-216ENST00000580751 F8A1P23610 371 aa14.66□□□□□ -0.06
SS18-216ENST00000580751 MAPK1P28482 360 aa14.66□□□□□ -0.06
SS18-216ENST00000580751 FOLR3P41439 243 aa14.66□□□□□ -0.06
SS18-216ENST00000580751 SSR2P43308 183 aa14.66□□□□□ -0.06
SS18-216ENST00000580751 HTR6P50406 440 aa14.66□□□□□ -0.06
SS18-216ENST00000580751 TMPRSS3P57727 454 aa14.66□□□□□ -0.06
SS18-216ENST00000580751 MAT1AQ00266 395 aaKnown RBP14.66□□□□□ -0.06
SS18-216ENST00000580751 MC1RQ01726 317 aa14.66□□□□□ -0.06
SS18-216ENST00000580751 NKG7Q16617 165 aa14.66□□□□□ -0.06
SS18-216ENST00000580751 C6orf136Q5SQH8 315 aa14.66□□□□□ -0.06
SS18-216ENST00000580751 NXNQ6DKJ4 435 aa14.66□□□□□ -0.06
SS18-216ENST00000580751 CCDC81Q6ZN84 652 aa14.66□□□□□ -0.06
SS18-216ENST00000580751 UBE3DQ7Z6J8 389 aa14.66□□□□□ -0.06
SS18-216ENST00000580751 MTDHQ86UE4 582 aaKnown RBP14.66□□□□□ -0.06
SS18-216ENST00000580751 NUDT13Q86X67 352 aa14.66□□□□□ -0.06
SS18-216ENST00000580751 ZSCAN1Q8NBB4 408 aa14.66□□□□□ -0.06
SS18-216ENST00000580751 OR2Y1Q8NGV0 311 aa14.66□□□□□ -0.06
SS18-216ENST00000580751 STT3BQ8TCJ2 826 aa14.66□□□□□ -0.06
SS18-216ENST00000580751 ADAMTS18Q8TE60 1221 aa14.66□□□□□ -0.06
SS18-216ENST00000580751 STARD8Q92502 1023 aa14.66□□□□□ -0.06
SS18-216ENST00000580751 MIEF2Q96C03 454 aa14.66□□□□□ -0.06
SS18-216ENST00000580751 C3orf30Q96M34 536 aa14.66□□□□□ -0.06
SS18-216ENST00000580751 QRFPRQ96P65 431 aa14.66□□□□□ -0.06
SS18-216ENST00000580751 OR1F2PQ96R84 312 aa14.66□□□□□ -0.06
SS18-216ENST00000580751 HBEGFQ99075 208 aa14.66□□□□□ -0.06
SS18-216ENST00000580751 TGIF2Q9GZN2 237 aa14.66□□□□□ -0.06
SS18-216ENST00000580751 PRDM7Q9NQW5 492 aa14.66□□□□□ -0.06
SS18-216ENST00000580751 C1orf109Q9NX04 203 aa14.66□□□□□ -0.06
SS18-216ENST00000580751 IL17BQ9UHF5 180 aa14.66□□□□□ -0.06
SS18-216ENST00000580751 TCFL5Q9UL49 500 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms