RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 CFAP36Q96G28 342 aa16.64■□□□□ 0.25
MKS1-209ENST00000580127 SERINC2Q96SA4 455 aa16.64■□□□□ 0.25
MKS1-209ENST00000580127 UCK2Q9BZX2 261 aa16.64■□□□□ 0.25
MKS1-209ENST00000580127 ROGDIQ9GZN7 287 aa16.64■□□□□ 0.25
MKS1-209ENST00000580127 TNFRSF10DQ9UBN6 386 aa16.64■□□□□ 0.25
MKS1-209ENST00000580127 OARD1Q9Y530 152 aa16.64■□□□□ 0.25
MKS1-209ENST00000580127 HRH3Q9Y5N1 445 aa16.64■□□□□ 0.25
MKS1-209ENST00000580127 SPACA6W5XKT8 324 aa16.64■□□□□ 0.25
MKS1-209ENST00000580127 CLGNO14967 610 aa16.63■□□□□ 0.25
MKS1-209ENST00000580127 ZNF37AP17032 561 aaPredicted RBP16.63■□□□□ 0.25
MKS1-209ENST00000580127 ART1P52961 327 aa16.63■□□□□ 0.25
MKS1-209ENST00000580127 PLA2G16P53816 162 aa16.63■□□□□ 0.25
MKS1-209ENST00000580127 MTTPP55157 894 aa16.63■□□□□ 0.25
MKS1-209ENST00000580127 TBL3Q12788 808 aaKnown RBP16.63■□□□□ 0.25
MKS1-209ENST00000580127 SERTAD2Q14140 314 aa16.63■□□□□ 0.25
MKS1-209ENST00000580127 SLC10A1Q14973 349 aa16.63■□□□□ 0.25
MKS1-209ENST00000580127 HIST2H2ACQ16777 129 aaPredicted RBP16.63■□□□□ 0.25
MKS1-209ENST00000580127 HIST2H2AA3Q6FI13 130 aa16.63■□□□□ 0.25
MKS1-209ENST00000580127 OPN5Q6U736 354 aa16.63■□□□□ 0.25
MKS1-209ENST00000580127 SLCO4C1Q6ZQN7 724 aa16.63■□□□□ 0.25
MKS1-209ENST00000580127 CCDC71Q8IV32 467 aaPredicted RBP16.63■□□□□ 0.25
MKS1-209ENST00000580127 TCAIMQ8N3R3 496 aa16.63■□□□□ 0.25
MKS1-209ENST00000580127 MARVELD2Q8N4S9 558 aa16.63■□□□□ 0.25
MKS1-209ENST00000580127 OR8K3Q8NH51 312 aa16.63■□□□□ 0.25
MKS1-209ENST00000580127 OR14A16Q8NHC5 309 aa16.63■□□□□ 0.25
MKS1-209ENST00000580127 REXO4Q9GZR2 422 aaKnown RBP16.63■□□□□ 0.25
MKS1-209ENST00000580127 LDAHQ9H6V9 325 aa16.63■□□□□ 0.25
MKS1-209ENST00000580127 GPRC5BQ9NZH0 403 aa16.63■□□□□ 0.25
MKS1-209ENST00000580127 ACAD8Q9UKU7 415 aa16.63■□□□□ 0.25
MKS1-209ENST00000580127 CSMD2Q7Z408 3487 aa16.62■□□□□ 0.25
MKS1-209ENST00000580127 FAM166BA8MTA8 275 aa16.62■□□□□ 0.25
MKS1-209ENST00000580127 WWP2O00308 870 aa16.62■□□□□ 0.25
MKS1-209ENST00000580127 CDC7O00311 574 aa16.62■□□□□ 0.25
MKS1-209ENST00000580127 DYRK3O43781 588 aa16.62■□□□□ 0.25
MKS1-209ENST00000580127 P04436 131 aa16.62■□□□□ 0.25
MKS1-209ENST00000580127 PEX19P40855 299 aa16.62■□□□□ 0.25
MKS1-209ENST00000580127 ELK3P41970 407 aa16.62■□□□□ 0.25
MKS1-209ENST00000580127 ZFP36L2P47974 494 aaKnown RBP16.62■□□□□ 0.25
MKS1-209ENST00000580127 NUP107P57740 925 aa16.62■□□□□ 0.25
MKS1-209ENST00000580127 FRG1Q14331 258 aaKnown RBP16.62■□□□□ 0.25
MKS1-209ENST00000580127 MORF4L2Q15014 288 aa16.62■□□□□ 0.25
MKS1-209ENST00000580127 PPP1R3AQ16821 1122 aa16.62■□□□□ 0.25
MKS1-209ENST00000580127 MSS51Q4VC12 460 aa16.62■□□□□ 0.25
MKS1-209ENST00000580127 ZNF585AQ6P3V2 769 aa16.62■□□□□ 0.25
MKS1-209ENST00000580127 B3GNT6Q6ZMB0 384 aa16.62■□□□□ 0.25
MKS1-209ENST00000580127 FAM47EQ6ZV65 393 aa16.62■□□□□ 0.25
MKS1-209ENST00000580127 GOLM1Q8NBJ4 401 aa16.62■□□□□ 0.25
MKS1-209ENST00000580127 CHDHQ8NE62 594 aaPredicted RBP16.62■□□□□ 0.25
MKS1-209ENST00000580127 SARAFQ96BY9 339 aa16.62■□□□□ 0.25
MKS1-209ENST00000580127 LRRC46Q96FV0 321 aa16.62■□□□□ 0.25
MKS1-209ENST00000580127 SMC6Q96SB8 1091 aa16.62■□□□□ 0.25
MKS1-209ENST00000580127 OSBPL9Q96SU4 736 aa16.62■□□□□ 0.25
MKS1-209ENST00000580127 ALOXE3Q9BYJ1 711 aa16.62■□□□□ 0.25
MKS1-209ENST00000580127 EHD1Q9H4M9 534 aa16.62■□□□□ 0.25
MKS1-209ENST00000580127 EXO5Q9H790 373 aa16.62■□□□□ 0.25
MKS1-209ENST00000580127 ZDHHC11Q9H8X9 412 aa16.62■□□□□ 0.25
MKS1-209ENST00000580127 IL1RL2Q9HB29 575 aa16.62■□□□□ 0.25
MKS1-209ENST00000580127 SACM1LQ9NTJ5 587 aa16.62■□□□□ 0.25
MKS1-209ENST00000580127 NSMCE4AQ9NXX6 385 aa16.62■□□□□ 0.25
MKS1-209ENST00000580127 COPS7AQ9UBW8 275 aa16.62■□□□□ 0.25
MKS1-209ENST00000580127 VTI1BQ9UEU0 232 aa16.62■□□□□ 0.25
MKS1-209ENST00000580127 A0A0G2JN53 185 aa16.61■□□□□ 0.25
MKS1-209ENST00000580127 NPEPPSL1A6NEC2 478 aa16.61■□□□□ 0.25
MKS1-209ENST00000580127 CES2O00748 559 aa16.61■□□□□ 0.25
MKS1-209ENST00000580127 SUSD5O60279 629 aa16.61■□□□□ 0.25
MKS1-209ENST00000580127 BANF1O75531 89 aa16.61■□□□□ 0.25
MKS1-209ENST00000580127 OR6B1O95007 311 aa16.61■□□□□ 0.25
MKS1-209ENST00000580127 COX7A2P14406 83 aa16.61■□□□□ 0.25
MKS1-209ENST00000580127 ARL4CP56559 192 aa16.61■□□□□ 0.25
MKS1-209ENST00000580127 MGAT5Q09328 741 aa16.61■□□□□ 0.25
MKS1-209ENST00000580127 BIKQ13323 160 aa16.61■□□□□ 0.25
MKS1-209ENST00000580127 LAPTM5Q13571 262 aa16.61■□□□□ 0.25
MKS1-209ENST00000580127 SLBPQ14493 270 aaKnown RBP eCLIP16.61■□□□□ 0.25
MKS1-209ENST00000580127 XKR6Q5GH73 641 aa16.61■□□□□ 0.25
MKS1-209ENST00000580127 EMC4Q5J8M3 183 aa16.61■□□□□ 0.25
MKS1-209ENST00000580127 HP1BP3Q5SSJ5 553 aaPredicted RBP16.61■□□□□ 0.25
MKS1-209ENST00000580127 WLSQ5T9L3 541 aa16.61■□□□□ 0.25
MKS1-209ENST00000580127 SYDE1Q6ZW31 735 aaPredicted RBP16.61■□□□□ 0.25
MKS1-209ENST00000580127 IGDCC3Q8IVU1 814 aa16.61■□□□□ 0.25
MKS1-209ENST00000580127 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.61■□□□□ 0.25
MKS1-209ENST00000580127 FAM109AQ8N4B1 249 aa16.61■□□□□ 0.25
MKS1-209ENST00000580127 FAM47BQ8NA70 645 aa16.61■□□□□ 0.25
MKS1-209ENST00000580127 OR5M9Q8NGP3 310 aa16.61■□□□□ 0.25
MKS1-209ENST00000580127 RASL10BQ96S79 203 aa16.61■□□□□ 0.25
MKS1-209ENST00000580127 TTTY12Q9BZ98 90 aa16.61■□□□□ 0.25
MKS1-209ENST00000580127 OR8D2Q9GZM6 311 aa16.61■□□□□ 0.25
MKS1-209ENST00000580127 NPDC1Q9NQX5 325 aaPredicted RBP16.61■□□□□ 0.25
MKS1-209ENST00000580127 DEPPQ9NTK1 212 aa16.61■□□□□ 0.25
MKS1-209ENST00000580127 RYDENQ9NUL5 291 aaKnown RBP16.61■□□□□ 0.25
MKS1-209ENST00000580127 DAPP1Q9UN19 280 aa16.61■□□□□ 0.25
MKS1-209ENST00000580127 CHMP2BQ9UQN3 213 aa16.61■□□□□ 0.25
MKS1-209ENST00000580127 MTORP42345 2549 aa16.61■□□□□ 0.25
MKS1-209ENST00000580127 KLK8O60259 260 aa16.6■□□□□ 0.25
MKS1-209ENST00000580127 WDR1O75083 606 aa16.6■□□□□ 0.25
MKS1-209ENST00000580127 HNRNPH1P31943 449 aaKnown RBP16.6■□□□□ 0.25
MKS1-209ENST00000580127 SOX3P41225 446 aa16.6■□□□□ 0.25
MKS1-209ENST00000580127 KCNC1P48547 511 aa16.6■□□□□ 0.25
MKS1-209ENST00000580127 MAN2A2P49641 1150 aa16.6■□□□□ 0.25
MKS1-209ENST00000580127 LIM2P55344 173 aa16.6■□□□□ 0.25
MKS1-209ENST00000580127 TFF3Q07654 80 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms