RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 CLNKQ7Z7G1 428 aa10.55□□□□□ -0.72
CDK5RAP3-204ENST00000577664 GPR135Q8IZ08 494 aa10.55□□□□□ -0.72
CDK5RAP3-204ENST00000577664 N4BP2L2Q92802 583 aaPredicted RBP10.55□□□□□ -0.72
CDK5RAP3-204ENST00000577664 TUBGCP3Q96CW5 907 aa10.55□□□□□ -0.72
CDK5RAP3-204ENST00000577664 APIPQ96GX9 242 aa10.55□□□□□ -0.72
CDK5RAP3-204ENST00000577664 TAAR9Q96RI9 348 aa10.55□□□□□ -0.72
CDK5RAP3-204ENST00000577664 ELAC2Q9BQ52 826 aaKnown RBP10.55□□□□□ -0.72
CDK5RAP3-204ENST00000577664 EBF4Q9BQW3 602 aa10.55□□□□□ -0.72
CDK5RAP3-204ENST00000577664 ASPSCR1Q9BZE9 553 aa10.55□□□□□ -0.72
CDK5RAP3-204ENST00000577664 ZMYND15Q9H091 742 aa10.55□□□□□ -0.72
CDK5RAP3-204ENST00000577664 WDR55Q9H6Y2 383 aaPredicted RBP10.55□□□□□ -0.72
CDK5RAP3-204ENST00000577664 SYNDIG1Q9H7V2 258 aa10.55□□□□□ -0.72
CDK5RAP3-204ENST00000577664 POLR1BQ9H9Y6 1135 aa10.55□□□□□ -0.72
CDK5RAP3-204ENST00000577664 TCF7L2Q9NQB0 619 aa10.55□□□□□ -0.72
CDK5RAP3-204ENST00000577664 MCM8Q9UJA3 840 aa10.55□□□□□ -0.72
CDK5RAP3-204ENST00000577664 SLC12A4Q9UP95 1085 aa10.55□□□□□ -0.72
CDK5RAP3-204ENST00000577664 FIS1Q9Y3D6 152 aa10.55□□□□□ -0.72
CDK5RAP3-204ENST00000577664 A0A088AWK7 358 aa10.54□□□□□ -0.72
CDK5RAP3-204ENST00000577664 A0A0A6YYD5 115 aa10.54□□□□□ -0.72
CDK5RAP3-204ENST00000577664 ATP6AP2A0A1C7CYW4 349 aa10.54□□□□□ -0.72
CDK5RAP3-204ENST00000577664 C4orf51C9J302 202 aa10.54□□□□□ -0.72
CDK5RAP3-204ENST00000577664 DSCR3O14972 297 aa10.54□□□□□ -0.72
CDK5RAP3-204ENST00000577664 NVLO15381 856 aaKnown RBP10.54□□□□□ -0.72
CDK5RAP3-204ENST00000577664 EFSO43281 561 aa10.54□□□□□ -0.72
CDK5RAP3-204ENST00000577664 ZNF749O43361 778 aa10.54□□□□□ -0.72
CDK5RAP3-204ENST00000577664 PEX11AO75192 247 aa10.54□□□□□ -0.72
CDK5RAP3-204ENST00000577664 SEC22BO75396 215 aa10.54□□□□□ -0.72
CDK5RAP3-204ENST00000577664 ATP6AP2O75787 350 aa10.54□□□□□ -0.72
CDK5RAP3-204ENST00000577664 PRPS2P11908 318 aa10.54□□□□□ -0.72
CDK5RAP3-204ENST00000577664 ZNF10P21506 573 aaPredicted RBP10.54□□□□□ -0.72
CDK5RAP3-204ENST00000577664 HIST1H1TP22492 207 aaPredicted RBP10.54□□□□□ -0.72
CDK5RAP3-204ENST00000577664 ATP5A1P25705 553 aaKnown RBP10.54□□□□□ -0.72
CDK5RAP3-204ENST00000577664 TPP2P29144 1249 aaPredicted RBP10.54□□□□□ -0.72
CDK5RAP3-204ENST00000577664 ADSLP30566 484 aaPredicted RBP10.54□□□□□ -0.72
CDK5RAP3-204ENST00000577664 ATP4BP51164 291 aa10.54□□□□□ -0.72
CDK5RAP3-204ENST00000577664 SNRPNP63162 240 aaKnown RBP10.54□□□□□ -0.72
CDK5RAP3-204ENST00000577664 SKP1P63208 163 aa10.54□□□□□ -0.72
CDK5RAP3-204ENST00000577664 CYP4F2P78329 520 aa10.54□□□□□ -0.72
CDK5RAP3-204ENST00000577664 ACSM2AQ08AH3 577 aa10.54□□□□□ -0.72
CDK5RAP3-204ENST00000577664 DDX39BQ13838 428 aaKnown RBP10.54□□□□□ -0.72
CDK5RAP3-204ENST00000577664 GSTA3Q16772 222 aa10.54□□□□□ -0.72
CDK5RAP3-204ENST00000577664 DEFB110Q30KQ9 67 aa10.54□□□□□ -0.72
CDK5RAP3-204ENST00000577664 TOR1AIP1Q5JTV8 583 aa10.54□□□□□ -0.72
CDK5RAP3-204ENST00000577664 DCAF12Q5T6F0 453 aa10.54□□□□□ -0.72
CDK5RAP3-204ENST00000577664 ZNF385CQ66K41 422 aaPredicted RBP10.54□□□□□ -0.72
CDK5RAP3-204ENST00000577664 ACSM2BQ68CK6 577 aa10.54□□□□□ -0.72
CDK5RAP3-204ENST00000577664 PWWP2BQ6NUJ5 590 aa10.54□□□□□ -0.72
CDK5RAP3-204ENST00000577664 NOXRED1Q6NXP6 359 aa10.54□□□□□ -0.72
CDK5RAP3-204ENST00000577664 CEACAM20Q6UY09 585 aa10.54□□□□□ -0.72
CDK5RAP3-204ENST00000577664 ACAD11Q709F0 780 aa10.54□□□□□ -0.72
CDK5RAP3-204ENST00000577664 COMMD6Q7Z4G1 85 aa10.54□□□□□ -0.72
CDK5RAP3-204ENST00000577664 FAM9CQ8IZT9 166 aa10.54□□□□□ -0.72
CDK5RAP3-204ENST00000577664 CPSF7Q8N684 471 aaKnown RBP10.54□□□□□ -0.72
CDK5RAP3-204ENST00000577664 ACOT4Q8N9L9 421 aa10.54□□□□□ -0.72
CDK5RAP3-204ENST00000577664 TTC29Q8NA56 475 aaPredicted RBP10.54□□□□□ -0.72
CDK5RAP3-204ENST00000577664 PROKR1Q8TCW9 393 aa10.54□□□□□ -0.72
CDK5RAP3-204ENST00000577664 OR52B2Q96RD2 323 aa10.54□□□□□ -0.72
CDK5RAP3-204ENST00000577664 PCNX1Q96RV3 2341 aa10.54□□□□□ -0.72
CDK5RAP3-204ENST00000577664 SERINC2Q96SA4 455 aa10.54□□□□□ -0.72
CDK5RAP3-204ENST00000577664 HBEGFQ99075 208 aa10.54□□□□□ -0.72
CDK5RAP3-204ENST00000577664 MACROD1Q9BQ69 325 aa10.54□□□□□ -0.72
CDK5RAP3-204ENST00000577664 DPH2Q9BQC3 489 aaPredicted RBP10.54□□□□□ -0.72
CDK5RAP3-204ENST00000577664 TMEM120AQ9BXJ8 343 aa10.54□□□□□ -0.72
CDK5RAP3-204ENST00000577664 MRPL1Q9BYD6 325 aaKnown RBP10.54□□□□□ -0.72
CDK5RAP3-204ENST00000577664 BRINP2Q9C0B6 783 aa10.54□□□□□ -0.72
CDK5RAP3-204ENST00000577664 SLC25A18Q9H1K4 315 aa10.54□□□□□ -0.72
CDK5RAP3-204ENST00000577664 ZNF385DQ9H6B1 395 aa10.54□□□□□ -0.72
CDK5RAP3-204ENST00000577664 LYRM4Q9HD34 91 aa10.54□□□□□ -0.72
CDK5RAP3-204ENST00000577664 CUTCQ9NTM9 273 aa10.54□□□□□ -0.72
CDK5RAP3-204ENST00000577664 SLC39A1Q9NY26 324 aa10.54□□□□□ -0.72
CDK5RAP3-204ENST00000577664 NOP53Q9NZM5 478 aaKnown RBP10.54□□□□□ -0.72
CDK5RAP3-204ENST00000577664 KCMF1Q9P0J7 381 aa10.54□□□□□ -0.72
CDK5RAP3-204ENST00000577664 ACSL6Q9UKU0 697 aa10.54□□□□□ -0.72
CDK5RAP3-204ENST00000577664 CDC14AQ9UNH5 594 aa10.54□□□□□ -0.72
CDK5RAP3-204ENST00000577664 LOXL2Q9Y4K0 774 aa10.54□□□□□ -0.72
CDK5RAP3-204ENST00000577664 ASB4Q9Y574 426 aa10.54□□□□□ -0.72
CDK5RAP3-204ENST00000577664 CRYBG3Q68DQ2 2970 aa10.53□□□□□ -0.72
CDK5RAP3-204ENST00000577664 ERI3O43414 337 aaKnown RBP10.53□□□□□ -0.72
CDK5RAP3-204ENST00000577664 TBX19O60806 448 aa10.53□□□□□ -0.72
CDK5RAP3-204ENST00000577664 DIAPH2O60879 1101 aa10.53□□□□□ -0.72
CDK5RAP3-204ENST00000577664 MED26O95402 600 aa10.53□□□□□ -0.72
CDK5RAP3-204ENST00000577664 EIF2S1P05198 315 aaKnown RBP10.53□□□□□ -0.72
CDK5RAP3-204ENST00000577664 ZNF888P0CJ79 500 aaPredicted RBP10.53□□□□□ -0.72
CDK5RAP3-204ENST00000577664 IL10P22301 178 aa10.53□□□□□ -0.72
CDK5RAP3-204ENST00000577664 MAPK1P28482 360 aa10.53□□□□□ -0.72
CDK5RAP3-204ENST00000577664 TIA1P31483 386 aaKnown RBP eCLIP10.53□□□□□ -0.722e-8■■□□□ 11.4
CDK5RAP3-204ENST00000577664 RORAP35398 523 aa10.53□□□□□ -0.72
CDK5RAP3-204ENST00000577664 MTTPP55157 894 aa10.53□□□□□ -0.72
CDK5RAP3-204ENST00000577664 MAP7Q14244 749 aa10.53□□□□□ -0.72
CDK5RAP3-204ENST00000577664 NR6A1Q15406 480 aa10.53□□□□□ -0.72
CDK5RAP3-204ENST00000577664 IGFBP7Q16270 282 aa10.53□□□□□ -0.72
CDK5RAP3-204ENST00000577664 SPDYAQ5MJ70 313 aa10.53□□□□□ -0.72
CDK5RAP3-204ENST00000577664 ZNF793Q6ZN11 406 aa10.53□□□□□ -0.72
CDK5RAP3-204ENST00000577664 NUDT13Q86X67 352 aa10.53□□□□□ -0.72
CDK5RAP3-204ENST00000577664 PDSS2Q86YH6 399 aa10.53□□□□□ -0.72
CDK5RAP3-204ENST00000577664 C1orf52Q8N6N3 182 aaKnown RBP10.53□□□□□ -0.72
CDK5RAP3-204ENST00000577664 SLC38A9Q8NBW4 561 aa10.53□□□□□ -0.72
CDK5RAP3-204ENST00000577664 ZNF764Q96H86 408 aaPredicted RBP10.53□□□□□ -0.72
CDK5RAP3-204ENST00000577664 SLC46A1Q96NT5 459 aa10.53□□□□□ -0.72
CDK5RAP3-204ENST00000577664 NDC1Q9BTX1 674 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms