RNA–Protein interactions for RNA: ENST00000577483.1

SSH2-205, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 1,630 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-205ENST00000577483 ISL2Q96A47 359 aa11.85□□□□□ -0.51
SSH2-205ENST00000577483 SCMH1Q96GD3 660 aa11.85□□□□□ -0.51
SSH2-205ENST00000577483 PAFAH2Q99487 392 aa11.85□□□□□ -0.51
SSH2-205ENST00000577483 UTP23Q9BRU9 249 aaKnown RBP11.85□□□□□ -0.51
SSH2-205ENST00000577483 VPS11Q9H270 941 aa11.85□□□□□ -0.51
SSH2-205ENST00000577483 COPS7BQ9H9Q2 264 aaPredicted RBP11.85□□□□□ -0.51
SSH2-205ENST00000577483 KLHL1Q9NR64 748 aa11.85□□□□□ -0.51
SSH2-205ENST00000577483 KCMF1Q9P0J7 381 aa11.85□□□□□ -0.51
SSH2-205ENST00000577483 ABI3Q9P2A4 366 aa11.85□□□□□ -0.51
SSH2-205ENST00000577483 NAV2Q8IVL1 2488 aa11.85□□□□□ -0.51
SSH2-205ENST00000577483 SIX3O95343 332 aaPredicted RBP11.84□□□□□ -0.51
SSH2-205ENST00000577483 DDAH2O95865 285 aa11.84□□□□□ -0.51
SSH2-205ENST00000577483 TGFB1P01137 390 aa11.84□□□□□ -0.51
SSH2-205ENST00000577483 GFAPP14136 432 aa11.84□□□□□ -0.51
SSH2-205ENST00000577483 EPB42P16452 691 aa11.84□□□□□ -0.51
SSH2-205ENST00000577483 HPDP32754 393 aaPredicted RBP11.84□□□□□ -0.51
SSH2-205ENST00000577483 ALDH18A1P54886 795 aaKnown RBP11.84□□□□□ -0.51
SSH2-205ENST00000577483 HIST2H2ACQ16777 129 aaPredicted RBP11.84□□□□□ -0.51
SSH2-205ENST00000577483 C4orf17Q53FE4 359 aa11.84□□□□□ -0.51
SSH2-205ENST00000577483 HIST2H2AA3Q6FI13 130 aa11.84□□□□□ -0.51
SSH2-205ENST00000577483 ZNF227Q86WZ6 799 aa11.84□□□□□ -0.51
SSH2-205ENST00000577483 MNS1Q8NEH6 495 aa11.84□□□□□ -0.51
SSH2-205ENST00000577483 ARMC2Q8NEN0 867 aa11.84□□□□□ -0.51
SSH2-205ENST00000577483 B3GNT7Q8NFL0 401 aa11.84□□□□□ -0.51
SSH2-205ENST00000577483 UHMK1Q8TAS1 419 aaKnown RBP11.84□□□□□ -0.51
SSH2-205ENST00000577483 ADAMTS18Q8TE60 1221 aa11.84□□□□□ -0.51
SSH2-205ENST00000577483 KCNC2Q96PR1 638 aa11.84□□□□□ -0.51
SSH2-205ENST00000577483 MAPKAP1Q9BPZ7 522 aa11.84□□□□□ -0.51
SSH2-205ENST00000577483 SORBS1Q9BX66 1292 aaKnown RBP11.84□□□□□ -0.51
SSH2-205ENST00000577483 PNO1Q9NRX1 252 aaKnown RBP11.84□□□□□ -0.51
SSH2-205ENST00000577483 CPSF2Q9P2I0 782 aaKnown RBP11.84□□□□□ -0.51
SSH2-205ENST00000577483 PPIEQ9UNP9 301 aaKnown RBP11.84□□□□□ -0.51
SSH2-205ENST00000577483 PCDHGB6Q9Y5F9 930 aa11.84□□□□□ -0.51
SSH2-205ENST00000577483 TRBV11-1A0A0K0K1C0 115 aa11.83□□□□□ -0.52
SSH2-205ENST00000577483 MYOCOSA0A1B0GUC4 107 aa11.83□□□□□ -0.52
SSH2-205ENST00000577483 SAP18O00422 153 aaKnown RBP11.83□□□□□ -0.52
SSH2-205ENST00000577483 LRRTM2O43300 516 aa11.83□□□□□ -0.52
SSH2-205ENST00000577483 PRKNO60260 465 aaPredicted RBP11.83□□□□□ -0.52
SSH2-205ENST00000577483 SCELO95171 688 aa11.83□□□□□ -0.52
SSH2-205ENST00000577483 INHBAP08476 426 aa11.83□□□□□ -0.52
SSH2-205ENST00000577483 STSP08842 583 aa11.83□□□□□ -0.52
SSH2-205ENST00000577483 ATP5A1P25705 553 aaKnown RBP11.83□□□□□ -0.52
SSH2-205ENST00000577483 GPR143P51810 404 aa11.83□□□□□ -0.52
SSH2-205ENST00000577483 MLF1P58340 268 aa11.83□□□□□ -0.52
SSH2-205ENST00000577483 OC90Q02509 493 aaPredicted RBP11.83□□□□□ -0.52
SSH2-205ENST00000577483 DDX39BQ13838 428 aaKnown RBP11.83□□□□□ -0.52
SSH2-205ENST00000577483 TERF2Q15554 542 aa11.83□□□□□ -0.52
SSH2-205ENST00000577483 GLE1Q53GS7 698 aaKnown RBP11.83□□□□□ -0.52
SSH2-205ENST00000577483 CEP128Q6ZU80 1094 aa11.83□□□□□ -0.52
SSH2-205ENST00000577483 GOLGA7Q7Z5G4 137 aa11.83□□□□□ -0.52
SSH2-205ENST00000577483 ZNF595Q8IYB9 648 aa11.83□□□□□ -0.52
SSH2-205ENST00000577483 ARMC10Q8N2F6 343 aa11.83□□□□□ -0.52
SSH2-205ENST00000577483 ACOT4Q8N9L9 421 aa11.83□□□□□ -0.52
SSH2-205ENST00000577483 HUS1BQ8NHY5 278 aa11.83□□□□□ -0.52
SSH2-205ENST00000577483 THAP3Q8WTV1 239 aaPredicted RBP11.83□□□□□ -0.52
SSH2-205ENST00000577483 DCAKDQ8WVC6 231 aa11.83□□□□□ -0.52
SSH2-205ENST00000577483 UBE2E3Q969T4 207 aa11.83□□□□□ -0.52
SSH2-205ENST00000577483 OR51B5Q9H339 312 aa11.83□□□□□ -0.52
SSH2-205ENST00000577483 LRFN1Q9P244 771 aa11.83□□□□□ -0.52
SSH2-205ENST00000577483 MRPS33Q9Y291 106 aaKnown RBP11.83□□□□□ -0.52
SSH2-205ENST00000577483 CCDC189A1A4V9 331 aa11.82□□□□□ -0.52
SSH2-205ENST00000577483 POC1B-GALNT4F8VUJ3 575 aa11.82□□□□□ -0.52
SSH2-205ENST00000577483 CLDN4O14493 209 aa11.82□□□□□ -0.52
SSH2-205ENST00000577483 LDB3O75112 727 aa11.82□□□□□ -0.52
SSH2-205ENST00000577483 UNC5CO95185 931 aa11.82□□□□□ -0.52
SSH2-205ENST00000577483 CRYABP02511 175 aaKnown RBP11.82□□□□□ -0.52
SSH2-205ENST00000577483 HIST1H1TP22492 207 aaPredicted RBP11.82□□□□□ -0.52
SSH2-205ENST00000577483 CLCN2P51788 898 aa11.82□□□□□ -0.52
SSH2-205ENST00000577483 TGM3Q08188 693 aa11.82□□□□□ -0.52
SSH2-205ENST00000577483 GTF2H2Q13888 395 aa11.82□□□□□ -0.52
SSH2-205ENST00000577483 PCBP2Q15366 365 aaKnown RBP eCLIP11.82□□□□□ -0.523e-9■■■■■ 113.5
SSH2-205ENST00000577483 C1QL3Q5VWW1 255 aa11.82□□□□□ -0.52
SSH2-205ENST00000577483 KHDRBS2Q5VWX1 349 aaKnown RBP11.82□□□□□ -0.52
SSH2-205ENST00000577483 GTF2H2CQ6P1K8 395 aa11.82□□□□□ -0.52
SSH2-205ENST00000577483 KLC3Q6P597 504 aa11.82□□□□□ -0.52
SSH2-205ENST00000577483 GFRALQ6UXV0 394 aa11.82□□□□□ -0.52
SSH2-205ENST00000577483 GALNTL5Q7Z4T8 443 aa11.82□□□□□ -0.52
SSH2-205ENST00000577483 MYLK4Q86YV6 388 aaPredicted RBP11.82□□□□□ -0.52
SSH2-205ENST00000577483 DNAJB8Q8NHS0 232 aa11.82□□□□□ -0.52
SSH2-205ENST00000577483 NCLNQ969V3 563 aa11.82□□□□□ -0.52
SSH2-205ENST00000577483 FRMD6Q96NE9 622 aa11.82□□□□□ -0.52
SSH2-205ENST00000577483 MTERF1Q99551 399 aaKnown RBP11.82□□□□□ -0.52
SSH2-205ENST00000577483 TBCDQ9BTW9 1192 aa11.82□□□□□ -0.52
SSH2-205ENST00000577483 ZNF717Q9BY31 904 aaPredicted RBP11.82□□□□□ -0.52
SSH2-205ENST00000577483 DEFB126Q9BYW3 111 aa11.82□□□□□ -0.52
SSH2-205ENST00000577483 TSPYL1Q9H0U9 437 aa11.82□□□□□ -0.52
SSH2-205ENST00000577483 LYRM4Q9HD34 91 aa11.82□□□□□ -0.52
SSH2-205ENST00000577483 ADAP2Q9NPF8 381 aa11.82□□□□□ -0.52
SSH2-205ENST00000577483 DMRT3Q9NQL9 472 aa11.82□□□□□ -0.52
SSH2-205ENST00000577483 XPR1Q9UBH6 696 aa11.82□□□□□ -0.52
SSH2-205ENST00000577483 ASPDHA6ND91 283 aa11.82□□□□□ -0.52
SSH2-205ENST00000577483 PLPP1O14494 284 aa11.82□□□□□ -0.52
SSH2-205ENST00000577483 SP1P08047 785 aa11.82□□□□□ -0.52
SSH2-205ENST00000577483 CD46P15529 392 aa11.82□□□□□ -0.52
SSH2-205ENST00000577483 COL8A1P27658 744 aa11.82□□□□□ -0.52
SSH2-205ENST00000577483 GCAP28676 217 aa11.82□□□□□ -0.52
SSH2-205ENST00000577483 EEF1DP29692 281 aaKnown RBP11.82□□□□□ -0.52
SSH2-205ENST00000577483 SERPINB1P30740 379 aa11.82□□□□□ -0.52
SSH2-205ENST00000577483 SSR2P43308 183 aa11.82□□□□□ -0.52
SSH2-205ENST00000577483 TMEM35AQ53FP2 167 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms