RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 IGLV3-12A0A075B6K2 115 aa8.94□□□□□ -0.98
NPLOC4-219ENST00000576713 CCDC151A5D8V7 595 aa8.94□□□□□ -0.98
NPLOC4-219ENST00000576713 LRIT2A6NDA9 550 aa8.94□□□□□ -0.98
NPLOC4-219ENST00000576713 COPEO14579 308 aa8.94□□□□□ -0.98
NPLOC4-219ENST00000576713 CLGNO14967 610 aa8.94□□□□□ -0.98
NPLOC4-219ENST00000576713 TYROBPO43914 113 aa8.94□□□□□ -0.98
NPLOC4-219ENST00000576713 GALR3O60755 368 aaPredicted RBP8.94□□□□□ -0.98
NPLOC4-219ENST00000576713 SMIM24O75264 130 aa8.94□□□□□ -0.98
NPLOC4-219ENST00000576713 ALOX12BO75342 701 aa8.94□□□□□ -0.98
NPLOC4-219ENST00000576713 KLHL18O94889 574 aa8.94□□□□□ -0.98
NPLOC4-219ENST00000576713 NSA2O95478 260 aaKnown RBP8.94□□□□□ -0.98
NPLOC4-219ENST00000576713 SLC35G6P0C7Q6 338 aa8.94□□□□□ -0.98
NPLOC4-219ENST00000576713 AGXTP21549 392 aa8.94□□□□□ -0.98
NPLOC4-219ENST00000576713 FBLP22087 321 aaKnown RBP8.94□□□□□ -0.98
NPLOC4-219ENST00000576713 ATP5F1P24539 256 aaPredicted RBP8.94□□□□□ -0.98
NPLOC4-219ENST00000576713 ARRB2P32121 409 aa8.94□□□□□ -0.98
NPLOC4-219ENST00000576713 GRK3P35626 688 aa8.94□□□□□ -0.98
NPLOC4-219ENST00000576713 NEK2P51955 445 aa8.94□□□□□ -0.98
NPLOC4-219ENST00000576713 PRKAA2P54646 552 aa8.94□□□□□ -0.98
NPLOC4-219ENST00000576713 HERVK_113P63132 956 aa8.94□□□□□ -0.98
NPLOC4-219ENST00000576713 KLC1Q07866 573 aa8.94□□□□□ -0.98
NPLOC4-219ENST00000576713 CHAF1BQ13112 559 aa8.94□□□□□ -0.98
NPLOC4-219ENST00000576713 FAM53BQ14153 422 aa8.94□□□□□ -0.98
NPLOC4-219ENST00000576713 TBR1Q16650 682 aa8.94□□□□□ -0.98
NPLOC4-219ENST00000576713 UGT8Q16880 541 aa8.94□□□□□ -0.98
NPLOC4-219ENST00000576713 DEFB109BQ30KR1 87 aa8.94□□□□□ -0.98
NPLOC4-219ENST00000576713 ADPRMQ3LIE5 342 aa8.94□□□□□ -0.98
NPLOC4-219ENST00000576713 KRT71Q3SY84 523 aa8.94□□□□□ -0.98
NPLOC4-219ENST00000576713 DEFB134Q4QY38 66 aa8.94□□□□□ -0.98
NPLOC4-219ENST00000576713 YOD1Q5VVQ6 348 aaPredicted RBP8.94□□□□□ -0.98
NPLOC4-219ENST00000576713 GARNL3Q5VVW2 1013 aa8.94□□□□□ -0.98
NPLOC4-219ENST00000576713 ZYG11AQ6WRX3 759 aa8.94□□□□□ -0.98
NPLOC4-219ENST00000576713 SYVN1Q86TM6 617 aa8.94□□□□□ -0.98
NPLOC4-219ENST00000576713 EXOC3L1Q86VI1 746 aa8.94□□□□□ -0.98
NPLOC4-219ENST00000576713 LCA5Q86VQ0 697 aa8.94□□□□□ -0.98
NPLOC4-219ENST00000576713 ZC3H7AQ8IWR0 971 aaKnown RBP8.94□□□□□ -0.98
NPLOC4-219ENST00000576713 L3MBTL4Q8NA19 623 aa8.94□□□□□ -0.98
NPLOC4-219ENST00000576713 CAMKVQ8NCB2 501 aa8.94□□□□□ -0.98
NPLOC4-219ENST00000576713 TMEM52Q8NDY8 209 aa8.94□□□□□ -0.98
NPLOC4-219ENST00000576713 OR4F6Q8NGB9 312 aa8.94□□□□□ -0.98
NPLOC4-219ENST00000576713 WDR20Q8TBZ3 569 aa8.94□□□□□ -0.98
NPLOC4-219ENST00000576713 STT3BQ8TCJ2 826 aa8.94□□□□□ -0.98
NPLOC4-219ENST00000576713 TRPC4APQ8TEL6 797 aa8.94□□□□□ -0.98
NPLOC4-219ENST00000576713 KIAA1143Q96AT1 154 aaPredicted RBP8.94□□□□□ -0.98
NPLOC4-219ENST00000576713 FKBP10Q96AY3 582 aa8.94□□□□□ -0.98
NPLOC4-219ENST00000576713 MS4A6EQ96DS6 147 aa8.94□□□□□ -0.98
NPLOC4-219ENST00000576713 L3HYPDHQ96EM0 354 aa8.94□□□□□ -0.98
NPLOC4-219ENST00000576713 APOPT1Q96IL0 206 aa8.94□□□□□ -0.98
NPLOC4-219ENST00000576713 QRFPRQ96P65 431 aa8.94□□□□□ -0.98
NPLOC4-219ENST00000576713 KCNA7Q96RP8 456 aa8.94□□□□□ -0.98
NPLOC4-219ENST00000576713 EFCAB11Q9BUY7 163 aa8.94□□□□□ -0.98
NPLOC4-219ENST00000576713 MECRQ9BV79 373 aa8.94□□□□□ -0.98
NPLOC4-219ENST00000576713 ERVK-6Q9BXR3 956 aa8.94□□□□□ -0.98
NPLOC4-219ENST00000576713 MS4A8Q9BY19 250 aa8.94□□□□□ -0.98
NPLOC4-219ENST00000576713 GPR87Q9BY21 358 aa8.94□□□□□ -0.98
NPLOC4-219ENST00000576713 TRIM55Q9BYV6 548 aa8.94□□□□□ -0.98
NPLOC4-219ENST00000576713 SLC26A1Q9H2B4 701 aa8.94□□□□□ -0.98
NPLOC4-219ENST00000576713 NT5DC2Q9H857 520 aa8.94□□□□□ -0.98
NPLOC4-219ENST00000576713 FARSBQ9NSD9 589 aaKnown RBP8.94□□□□□ -0.98
NPLOC4-219ENST00000576713 MKS1Q9NXB0 559 aa8.94□□□□□ -0.98
NPLOC4-219ENST00000576713 DCDC2Q9UHG0 476 aa8.94□□□□□ -0.98
NPLOC4-219ENST00000576713 KCND3Q9UK17 655 aa8.94□□□□□ -0.98
NPLOC4-219ENST00000576713 PTRH2Q9Y3E5 179 aaKnown RBP8.94□□□□□ -0.98
NPLOC4-219ENST00000576713 ATRXP46100 2492 aa8.93□□□□□ -0.98
NPLOC4-219ENST00000576713 ZNF891A8MT65 544 aaPredicted RBP8.93□□□□□ -0.98
NPLOC4-219ENST00000576713 C9J4A7 227 aa8.93□□□□□ -0.98
NPLOC4-219ENST00000576713 FAM227AF5H4B4 570 aa8.93□□□□□ -0.98
NPLOC4-219ENST00000576713 K7EM74 188 aa8.93□□□□□ -0.98
NPLOC4-219ENST00000576713 AGPSO00116 658 aa8.93□□□□□ -0.98
NPLOC4-219ENST00000576713 SAP18O00422 153 aaKnown RBP8.93□□□□□ -0.98
NPLOC4-219ENST00000576713 RTCAO00442 366 aaKnown RBP8.93□□□□□ -0.98
NPLOC4-219ENST00000576713 DNAJB5O75953 348 aa8.93□□□□□ -0.98
NPLOC4-219ENST00000576713 OR4F21O95013 312 aa8.93□□□□□ -0.98
NPLOC4-219ENST00000576713 SERPINA6P08185 405 aa8.93□□□□□ -0.98
NPLOC4-219ENST00000576713 ZGLP1P0C6A0 271 aa8.93□□□□□ -0.98
NPLOC4-219ENST00000576713 PCNAP12004 261 aa8.93□□□□□ -0.98
NPLOC4-219ENST00000576713 ALOX12P18054 663 aa8.93□□□□□ -0.98
NPLOC4-219ENST00000576713 IMPDH1P20839 514 aa8.93□□□□□ -0.98
NPLOC4-219ENST00000576713 OTX2P32243 289 aa8.93□□□□□ -0.98
NPLOC4-219ENST00000576713 HTR6P50406 440 aa8.93□□□□□ -0.98
NPLOC4-219ENST00000576713 HNRNPFP52597 415 aaKnown RBP8.93□□□□□ -0.98
NPLOC4-219ENST00000576713 FOXA1P55317 472 aa8.93□□□□□ -0.98
NPLOC4-219ENST00000576713 RPS15P62841 145 aaKnown RBP8.93□□□□□ -0.98
NPLOC4-219ENST00000576713 ATP1A4Q13733 1029 aa8.93□□□□□ -0.98
NPLOC4-219ENST00000576713 DDX39BQ13838 428 aaKnown RBP8.93□□□□□ -0.98
NPLOC4-219ENST00000576713 RUNX2Q13950 521 aa8.93□□□□□ -0.98
NPLOC4-219ENST00000576713 ZRSR2Q15696 482 aaKnown RBP8.93□□□□□ -0.98
NPLOC4-219ENST00000576713 CPSF6Q16630 551 aaKnown RBP eCLIP8.93□□□□□ -0.98
NPLOC4-219ENST00000576713 CEP85LQ5SZL2 805 aa8.93□□□□□ -0.98
NPLOC4-219ENST00000576713 PRMT9Q6P2P2 845 aa8.93□□□□□ -0.98
NPLOC4-219ENST00000576713 ZNF793Q6ZN11 406 aa8.93□□□□□ -0.98
NPLOC4-219ENST00000576713 NLRC3Q7RTR2 1065 aa8.93□□□□□ -0.98
NPLOC4-219ENST00000576713 LSRQ86X29 649 aaPredicted RBP8.93□□□□□ -0.98
NPLOC4-219ENST00000576713 MYLK4Q86YV6 388 aaPredicted RBP8.93□□□□□ -0.98
NPLOC4-219ENST00000576713 C10orf107Q8IVU9 208 aa8.93□□□□□ -0.98
NPLOC4-219ENST00000576713 EXD3Q8N9H8 876 aa8.93□□□□□ -0.98
NPLOC4-219ENST00000576713 LSM14AQ8ND56 463 aaKnown RBP8.93□□□□□ -0.98
NPLOC4-219ENST00000576713 OR2Y1Q8NGV0 311 aa8.93□□□□□ -0.98
NPLOC4-219ENST00000576713 HUS1BQ8NHY5 278 aa8.93□□□□□ -0.98
NPLOC4-219ENST00000576713 TCP10LQ8TDR4 215 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms