RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 RASL10BQ96S79 203 aa8.34□□□□□ -1.07
SMG6-218ENST00000575454 AIF1LQ9BQI0 150 aa8.34□□□□□ -1.07
SMG6-218ENST00000575454 AARSD1Q9BTE6 412 aaKnown RBP8.34□□□□□ -1.07
SMG6-218ENST00000575454 TRIM5Q9C035 493 aa8.34□□□□□ -1.07
SMG6-218ENST00000575454 ZNF395Q9H8N7 513 aaPredicted RBP8.34□□□□□ -1.07
SMG6-218ENST00000575454 ADAP2Q9NPF8 381 aa8.34□□□□□ -1.07
SMG6-218ENST00000575454 DMRT3Q9NQL9 472 aa8.34□□□□□ -1.07
SMG6-218ENST00000575454 FBXO6Q9NRD1 293 aaPredicted RBP8.34□□□□□ -1.07
SMG6-218ENST00000575454 RYDENQ9NUL5 291 aaKnown RBP8.34□□□□□ -1.07
SMG6-218ENST00000575454 ARL15Q9NXU5 204 aa8.34□□□□□ -1.07
SMG6-218ENST00000575454 TAS2R13Q9NYV9 303 aa8.34□□□□□ -1.07
SMG6-218ENST00000575454 SH2B3Q9UQQ2 575 aa8.34□□□□□ -1.07
SMG6-218ENST00000575454 REXO2Q9Y3B8 237 aaKnown RBP8.34□□□□□ -1.07
SMG6-218ENST00000575454 AHRRA9YTQ3 701 aa8.33□□□□□ -1.08
SMG6-218ENST00000575454 IFNA16P05015 189 aa8.33□□□□□ -1.08
SMG6-218ENST00000575454 SMIM10L1P0DMW3 83 aa8.33□□□□□ -1.08
SMG6-218ENST00000575454 BMP5P22003 454 aa8.33□□□□□ -1.08
SMG6-218ENST00000575454 GSTM2P28161 218 aa8.33□□□□□ -1.08
SMG6-218ENST00000575454 SOX3P41225 446 aa8.33□□□□□ -1.08
SMG6-218ENST00000575454 HNF4AP41235 474 aa8.33□□□□□ -1.08
SMG6-218ENST00000575454 NR0B1P51843 470 aaKnown RBP8.33□□□□□ -1.08
SMG6-218ENST00000575454 DCAF7P61962 342 aa8.33□□□□□ -1.08
SMG6-218ENST00000575454 NKX6-1P78426 367 aaPredicted RBP8.33□□□□□ -1.08
SMG6-218ENST00000575454 SORDQ00796 357 aa8.33□□□□□ -1.08
SMG6-218ENST00000575454 DHX9Q08211 1270 aaKnown RBP8.33□□□□□ -1.08
SMG6-218ENST00000575454 FOXO1Q12778 655 aa8.33□□□□□ -1.08
SMG6-218ENST00000575454 AKAP6Q13023 2319 aa8.33□□□□□ -1.08
SMG6-218ENST00000575454 SLC13A2Q13183 592 aa8.33□□□□□ -1.08
SMG6-218ENST00000575454 SNTB1Q13884 538 aaKnown RBP8.33□□□□□ -1.08
SMG6-218ENST00000575454 EFTUD2Q15029 972 aaKnown RBP eCLIP8.33□□□□□ -1.08
SMG6-218ENST00000575454 CHSY3Q70JA7 882 aa8.33□□□□□ -1.08
SMG6-218ENST00000575454 DENND6AQ8IWF6 608 aa8.33□□□□□ -1.08
SMG6-218ENST00000575454 ULK2Q8IYT8 1036 aa8.33□□□□□ -1.08
SMG6-218ENST00000575454 RNF10Q8N5U6 811 aaKnown RBP8.33□□□□□ -1.08
SMG6-218ENST00000575454 TTLQ8NG68 377 aa8.33□□□□□ -1.08
SMG6-218ENST00000575454 OR56A3Q8NH54 315 aa8.33□□□□□ -1.08
SMG6-218ENST00000575454 OR14A16Q8NHC5 309 aa8.33□□□□□ -1.08
SMG6-218ENST00000575454 EEF1AKMT1Q8WVE0 214 aa8.33□□□□□ -1.08
SMG6-218ENST00000575454 MAIP1Q8WWC4 291 aa8.33□□□□□ -1.08
SMG6-218ENST00000575454 SLCO2A1Q92959 643 aa8.33□□□□□ -1.08
SMG6-218ENST00000575454 SMIM10Q96HG1 83 aa8.33□□□□□ -1.08
SMG6-218ENST00000575454 SMR3AQ99954 134 aa8.33□□□□□ -1.08
SMG6-218ENST00000575454 SH3GL2Q99962 352 aa8.33□□□□□ -1.08
SMG6-218ENST00000575454 YIPF4Q9BSR8 244 aa8.33□□□□□ -1.08
SMG6-218ENST00000575454 REPIN1Q9BWE0 567 aaKnown RBP8.33□□□□□ -1.08
SMG6-218ENST00000575454 PELI2Q9HAT8 420 aa8.33□□□□□ -1.08
SMG6-218ENST00000575454 ACKR4Q9NPB9 350 aa8.33□□□□□ -1.08
SMG6-218ENST00000575454 PRTFDC1Q9NRG1 225 aa8.33□□□□□ -1.08
SMG6-218ENST00000575454 HOMER3Q9NSC5 361 aa8.33□□□□□ -1.08
SMG6-218ENST00000575454 QPCTLQ9NXS2 382 aa8.33□□□□□ -1.08
SMG6-218ENST00000575454 ZNF223Q9UK11 482 aaPredicted RBP8.33□□□□□ -1.08
SMG6-218ENST00000575454 ADAMTS6Q9UKP5 1117 aa8.33□□□□□ -1.08
SMG6-218ENST00000575454 BOKQ9UMX3 212 aaPredicted RBP8.33□□□□□ -1.08
SMG6-218ENST00000575454 DYRK1BQ9Y463 629 aa8.33□□□□□ -1.08
SMG6-218ENST00000575454 LIPGQ9Y5X9 500 aa8.33□□□□□ -1.08
SMG6-218ENST00000575454 FN1P02751 2386 aaKnown RBP8.32□□□□□ -1.08
SMG6-218ENST00000575454 A0A0G2JMM0 328 aa8.32□□□□□ -1.08
SMG6-218ENST00000575454 A0A1W2PPB8 328 aa8.32□□□□□ -1.08
SMG6-218ENST00000575454 A0A1W2PRS3 328 aa8.32□□□□□ -1.08
SMG6-218ENST00000575454 KIR3DP1A8MWS1 328 aa8.32□□□□□ -1.08
SMG6-218ENST00000575454 G3V3Y1 287 aa8.32□□□□□ -1.08
SMG6-218ENST00000575454 WWP2O00308 870 aa8.32□□□□□ -1.08
SMG6-218ENST00000575454 B3GALT2O43825 422 aa8.32□□□□□ -1.08
SMG6-218ENST00000575454 B3GALT4O96024 378 aa8.32□□□□□ -1.08
SMG6-218ENST00000575454 IL2RAP01589 272 aa8.32□□□□□ -1.08
SMG6-218ENST00000575454 ENO2P09104 434 aaPredicted RBP8.32□□□□□ -1.08
SMG6-218ENST00000575454 MLNP12872 115 aa8.32□□□□□ -1.08
SMG6-218ENST00000575454 TIMP3P35625 211 aa8.32□□□□□ -1.08
SMG6-218ENST00000575454 SLC1A2P43004 574 aa8.32□□□□□ -1.08
SMG6-218ENST00000575454 MAGEA6P43360 314 aa8.32□□□□□ -1.08
SMG6-218ENST00000575454 BTN3A2P78410 334 aa8.32□□□□□ -1.08
SMG6-218ENST00000575454 REEP5Q00765 189 aa8.32□□□□□ -1.08
SMG6-218ENST00000575454 STX4Q12846 297 aa8.32□□□□□ -1.08
SMG6-218ENST00000575454 RBBP5Q15291 538 aaKnown RBP8.32□□□□□ -1.08
SMG6-218ENST00000575454 ZNF750Q32MQ0 723 aa8.32□□□□□ -1.08
SMG6-218ENST00000575454 CATSPEREQ5SY80 951 aa8.32□□□□□ -1.08
SMG6-218ENST00000575454 SLC22A10Q63ZE4 541 aa8.32□□□□□ -1.08
SMG6-218ENST00000575454 MBOAT1Q6ZNC8 495 aa8.32□□□□□ -1.08
SMG6-218ENST00000575454 LACC1Q8IV20 430 aa8.32□□□□□ -1.08
SMG6-218ENST00000575454 DND1Q8IYX4 353 aaKnown RBP8.32□□□□□ -1.08
SMG6-218ENST00000575454 LIX1Q8N485 282 aa8.32□□□□□ -1.08
SMG6-218ENST00000575454 SIMC1Q8NDZ2 872 aa8.32□□□□□ -1.08
SMG6-218ENST00000575454 NANOS1Q8WY41 292 aaKnown RBP8.32□□□□□ -1.08
SMG6-218ENST00000575454 NEIL2Q969S2 332 aa8.32□□□□□ -1.08
SMG6-218ENST00000575454 GAL3ST3Q96A11 431 aa8.32□□□□□ -1.08
SMG6-218ENST00000575454 KIAA1191Q96A73 305 aa8.32□□□□□ -1.08
SMG6-218ENST00000575454 ZNF669Q96BR6 464 aaPredicted RBP8.32□□□□□ -1.08
SMG6-218ENST00000575454 PYCR2Q96C36 320 aa8.32□□□□□ -1.08
SMG6-218ENST00000575454 FBXL8Q96CD0 374 aa8.32□□□□□ -1.08
SMG6-218ENST00000575454 SCYL1Q96KG9 808 aa8.32□□□□□ -1.08
SMG6-218ENST00000575454 FAM167BQ9BTA0 163 aa8.32□□□□□ -1.08
SMG6-218ENST00000575454 CNPPD1Q9BV87 410 aa8.32□□□□□ -1.08
SMG6-218ENST00000575454 TSPY26PQ9H489 355 aa8.32□□□□□ -1.08
SMG6-218ENST00000575454 PLEKHF2Q9H8W4 249 aa8.32□□□□□ -1.08
SMG6-218ENST00000575454 XAB2Q9HCS7 855 aaKnown RBP8.32□□□□□ -1.08
SMG6-218ENST00000575454 ZFP64Q9NPA5 681 aa8.32□□□□□ -1.08
SMG6-218ENST00000575454 C20orf96Q9NUD7 363 aaPredicted RBP8.32□□□□□ -1.08
SMG6-218ENST00000575454 VTI1BQ9UEU0 232 aa8.32□□□□□ -1.08
SMG6-218ENST00000575454 FBXO5Q9UKT4 447 aa8.32□□□□□ -1.08
SMG6-218ENST00000575454 ATG4BQ9Y4P1 393 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms