RNA–Protein interactions for RNA: ENST00000573895.1

ABR-223, Transcript of ABR, RhoGEF and GTPase activating protein, human

TSL 3

Gene ABR, Length 1,010 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABR-223	ENST00000573895	ASPG	Q86U10	573 aa		13.59	□□□□□ -0.23
ABR-223	ENST00000573895	MYLK4	Q86YV6	388 aa	Predicted RBP	13.59	□□□□□ -0.23
ABR-223	ENST00000573895	AGR3	Q8TD06	166 aa		13.59	□□□□□ -0.23
ABR-223	ENST00000573895	BCAS4	Q8TDM0	211 aa		13.59	□□□□□ -0.23
ABR-223	ENST00000573895	SLC13A3	Q8WWT9	602 aa		13.59	□□□□□ -0.23
ABR-223	ENST00000573895	SEC16B	Q96JE7	1060 aa		13.59	□□□□□ -0.23
ABR-223	ENST00000573895	CDK15	Q96Q40	435 aa		13.59	□□□□□ -0.23
ABR-223	ENST00000573895	CRB3	Q9BUF7	120 aa		13.59	□□□□□ -0.23
ABR-223	ENST00000573895	FAM107B	Q9H098	131 aa		13.59	□□□□□ -0.23
ABR-223	ENST00000573895	NPHS2	Q9NP85	383 aa		13.59	□□□□□ -0.23
ABR-223	ENST00000573895	TRPC4	Q9UBN4	977 aa		13.59	□□□□□ -0.23
ABR-223	ENST00000573895	DNAJC15	Q9Y5T4	150 aa		13.59	□□□□□ -0.23
ABR-223	ENST00000573895	FLNB	O75369	2602 aa	Known RBP	13.59	□□□□□ -0.23
ABR-223	ENST00000573895	ASH1L	Q9NR48	2969 aa	Known RBP	13.58	□□□□□ -0.24
ABR-223	ENST00000573895	SCN2A	Q99250	2005 aa		13.58	□□□□□ -0.24
ABR-223	ENST00000573895		A0A0A6YYC8	382 aa	Predicted RBP	13.58	□□□□□ -0.24
ABR-223	ENST00000573895		A0A1B0GTL3	188 aa		13.58	□□□□□ -0.24
ABR-223	ENST00000573895	FEZF1	A0PJY2	475 aa		13.58	□□□□□ -0.24
ABR-223	ENST00000573895		I3L1I5	382 aa	Predicted RBP	13.58	□□□□□ -0.24
ABR-223	ENST00000573895	SLC28A1	O00337	649 aa		13.58	□□□□□ -0.24
ABR-223	ENST00000573895	MANBA	O00462	879 aa		13.58	□□□□□ -0.24
ABR-223	ENST00000573895	ALPP	P05187	535 aa		13.58	□□□□□ -0.24
ABR-223	ENST00000573895	ATXN8OS	P0DMR3	200 aa		13.58	□□□□□ -0.24
ABR-223	ENST00000573895	GSTM2	P28161	218 aa		13.58	□□□□□ -0.24
ABR-223	ENST00000573895	IFT88	Q13099	833 aa		13.58	□□□□□ -0.24
ABR-223	ENST00000573895	ZRSR2	Q15696	482 aa	Known RBP	13.58	□□□□□ -0.24
ABR-223	ENST00000573895	CPSF6	Q16630	551 aa	Known RBP eCLIP	13.58	□□□□□ -0.24
ABR-223	ENST00000573895	VWA2	Q5GFL6	755 aa		13.58	□□□□□ -0.24
ABR-223	ENST00000573895	GKAP1	Q5VSY0	366 aa	Predicted RBP	13.58	□□□□□ -0.24
ABR-223	ENST00000573895	FRG2	Q64ET8	278 aa		13.58	□□□□□ -0.24
ABR-223	ENST00000573895	CLEC6A	Q6EIG7	209 aa		13.58	□□□□□ -0.24
ABR-223	ENST00000573895	EPGN	Q6UW88	154 aa		13.58	□□□□□ -0.24
ABR-223	ENST00000573895	TMEM151B	Q8IW70	566 aa		13.58	□□□□□ -0.24
ABR-223	ENST00000573895	LAS2	Q8IYD9	372 aa		13.58	□□□□□ -0.24
ABR-223	ENST00000573895	OR11G2	Q8NGC1	345 aa		13.58	□□□□□ -0.24
ABR-223	ENST00000573895	TWIST2	Q8WVJ9	160 aa		13.58	□□□□□ -0.24
ABR-223	ENST00000573895	FRG2B	Q96QU4	278 aa		13.58	□□□□□ -0.24
ABR-223	ENST00000573895	ELOVL6	Q9H5J4	265 aa		13.58	□□□□□ -0.24
ABR-223	ENST00000573895	TNFRSF12A	Q9NP84	129 aa		13.58	□□□□□ -0.24
ABR-223	ENST00000573895	MARCO	Q9UEW3	520 aa	Predicted RBP	13.58	□□□□□ -0.24
ABR-223	ENST00000573895	ZFP69B	Q9UJL9	534 aa		13.58	□□□□□ -0.24
ABR-223	ENST00000573895	C3orf18	Q9UK00	162 aa		13.58	□□□□□ -0.24
ABR-223	ENST00000573895	FBXL4	Q9UKA2	621 aa		13.58	□□□□□ -0.24
ABR-223	ENST00000573895	TIMM22	Q9Y584	194 aa		13.58	□□□□□ -0.24
ABR-223	ENST00000573895		A6NL46	340 aa		13.57	□□□□□ -0.24
ABR-223	ENST00000573895	IDS	B3KWA1	339 aa		13.57	□□□□□ -0.24
ABR-223	ENST00000573895	FOXE1	O00358	373 aa	Predicted RBP	13.57	□□□□□ -0.24
ABR-223	ENST00000573895	NDUFAB1	O14561	156 aa		13.57	□□□□□ -0.24
ABR-223	ENST00000573895	ZNF195	O14628	629 aa		13.57	□□□□□ -0.24
ABR-223	ENST00000573895	OR1F1	O43749	312 aa		13.57	□□□□□ -0.24
ABR-223	ENST00000573895	HP	P00738	406 aa		13.57	□□□□□ -0.24
ABR-223	ENST00000573895	HSD3B1	P14060	373 aa		13.57	□□□□□ -0.24
ABR-223	ENST00000573895	IL10	P22301	178 aa		13.57	□□□□□ -0.24
ABR-223	ENST00000573895	HSD3B2	P26439	372 aa		13.57	□□□□□ -0.24
ABR-223	ENST00000573895	PIK3CB	P42338	1070 aa		13.57	□□□□□ -0.24
ABR-223	ENST00000573895	SCTR	P47872	440 aa		13.57	□□□□□ -0.24
ABR-223	ENST00000573895	ARFIP2	P53365	341 aa		13.57	□□□□□ -0.24
ABR-223	ENST00000573895	EMP2	P54851	167 aa		13.57	□□□□□ -0.24
ABR-223	ENST00000573895	AQP5	P55064	265 aa		13.57	□□□□□ -0.24
ABR-223	ENST00000573895	FOXA1	P55317	472 aa		13.57	□□□□□ -0.24
ABR-223	ENST00000573895	SKP1	P63208	163 aa		13.57	□□□□□ -0.24
ABR-223	ENST00000573895	PHEX	P78562	749 aa		13.57	□□□□□ -0.24
ABR-223	ENST00000573895	REEP5	Q00765	189 aa		13.57	□□□□□ -0.24
ABR-223	ENST00000573895	HERC3	Q15034	1050 aa		13.57	□□□□□ -0.24
ABR-223	ENST00000573895	CGB2	Q6NT52	195 aa		13.57	□□□□□ -0.24
ABR-223	ENST00000573895	TMIGD1	Q6UXZ0	262 aa		13.57	□□□□□ -0.24
ABR-223	ENST00000573895	SHISA6	Q6ZSJ9	500 aa		13.57	□□□□□ -0.24
ABR-223	ENST00000573895	TRIM46	Q7Z4K8	759 aa		13.57	□□□□□ -0.24
ABR-223	ENST00000573895	LAPTM4B	Q86VI4	370 aa		13.57	□□□□□ -0.24
ABR-223	ENST00000573895	GBP7	Q8N8V2	638 aa	Predicted RBP	13.57	□□□□□ -0.24
ABR-223	ENST00000573895	TRPV3	Q8NET8	790 aa		13.57	□□□□□ -0.24
ABR-223	ENST00000573895	TTL	Q8NG68	377 aa		13.57	□□□□□ -0.24
ABR-223	ENST00000573895	OR7G3	Q8NG95	312 aa		13.57	□□□□□ -0.24
ABR-223	ENST00000573895	NT5C	Q8TCD5	201 aa		13.57	□□□□□ -0.24
ABR-223	ENST00000573895	ZNF473	Q8WTR7	871 aa	Known RBP	13.57	□□□□□ -0.24
ABR-223	ENST00000573895	CCDC28B	Q9BUN5	200 aa		13.57	□□□□□ -0.24
ABR-223	ENST00000573895	RHBG	Q9H310	441 aa		13.57	□□□□□ -0.24
ABR-223	ENST00000573895	ZNF552	Q9H707	407 aa	Predicted RBP	13.57	□□□□□ -0.24
ABR-223	ENST00000573895	MEAF6	Q9HAF1	191 aa		13.57	□□□□□ -0.24
ABR-223	ENST00000573895	CLK4	Q9HAZ1	481 aa	Known RBP	13.57	□□□□□ -0.24
ABR-223	ENST00000573895	KCNK13	Q9HB14	408 aa		13.57	□□□□□ -0.24
ABR-223	ENST00000573895	ANKH	Q9HCJ1	492 aa		13.57	□□□□□ -0.24
ABR-223	ENST00000573895	RIC8B	Q9NVN3	520 aa		13.57	□□□□□ -0.24
ABR-223	ENST00000573895	NMRK1	Q9NWW6	199 aa		13.57	□□□□□ -0.24
ABR-223	ENST00000573895	ZNF490	Q9ULM2	529 aa	Predicted RBP	13.57	□□□□□ -0.24
ABR-223	ENST00000573895	PPT2	Q9UMR5	302 aa		13.57	□□□□□ -0.24
ABR-223	ENST00000573895	MRPS2	Q9Y399	296 aa	Known RBP	13.57	□□□□□ -0.24
ABR-223	ENST00000573895	LOC102723996	A0A087X1L8	192 aa		13.56	□□□□□ -0.24
ABR-223	ENST00000573895	URAD	A6NGE7	173 aa		13.56	□□□□□ -0.24
ABR-223	ENST00000573895	TMEM233	B4DJY2	109 aa		13.56	□□□□□ -0.24
ABR-223	ENST00000573895	RGS14	O43566	566 aa		13.56	□□□□□ -0.24
ABR-223	ENST00000573895	BMP10	O95393	424 aa		13.56	□□□□□ -0.24
ABR-223	ENST00000573895	ACPP	P15309	386 aa		13.56	□□□□□ -0.24
ABR-223	ENST00000573895	CD22	P20273	847 aa		13.56	□□□□□ -0.24
ABR-223	ENST00000573895	VARS	P26640	1264 aa	Known RBP	13.56	□□□□□ -0.24
ABR-223	ENST00000573895	SERPINB3	P29508	390 aa		13.56	□□□□□ -0.24
ABR-223	ENST00000573895	IDH3A	P50213	366 aa		13.56	□□□□□ -0.24
ABR-223	ENST00000573895	KCNC4	Q03721	635 aa		13.56	□□□□□ -0.24
ABR-223	ENST00000573895	BTK	Q06187	659 aa		13.56	□□□□□ -0.24
ABR-223	ENST00000573895	GABPB1	Q06547	395 aa	Predicted RBP	13.56	□□□□□ -0.24

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