RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 FHL5Q5TD97 284 aa7□□□□□ -1.29
NUP88-205ENST00000572809 ANKRD34AQ69YU3 496 aa7□□□□□ -1.29
NUP88-205ENST00000572809 SULT1C3Q6IMI6 304 aa7□□□□□ -1.29
NUP88-205ENST00000572809 CLEC18BQ6UXF7 455 aa7□□□□□ -1.29
NUP88-205ENST00000572809 RAPH1Q70E73 1250 aa7□□□□□ -1.29
NUP88-205ENST00000572809 CPEB2Q7Z5Q1 589 aaKnown RBP7□□□□□ -1.29
NUP88-205ENST00000572809 ANKRD37Q7Z713 158 aa7□□□□□ -1.29
NUP88-205ENST00000572809 MRPL41Q8IXM3 137 aaKnown RBP7□□□□□ -1.29
NUP88-205ENST00000572809 KLHDC8AQ8IYD2 350 aa7□□□□□ -1.29
NUP88-205ENST00000572809 MMGT1Q8N4V1 131 aa7□□□□□ -1.29
NUP88-205ENST00000572809 AFAP1L2Q8N4X5 818 aa7□□□□□ -1.29
NUP88-205ENST00000572809 SIRT6Q8N6T7 355 aa7□□□□□ -1.29
NUP88-205ENST00000572809 ANKRD53Q8N9V6 530 aa7□□□□□ -1.29
NUP88-205ENST00000572809 CLEC18CQ8NCF0 446 aa7□□□□□ -1.29
NUP88-205ENST00000572809 CATSPER1Q8NEC5 780 aa7□□□□□ -1.29
NUP88-205ENST00000572809 OR5T3Q8NGG3 340 aa7□□□□□ -1.29
NUP88-205ENST00000572809 OR1N1Q8NGS0 311 aa7□□□□□ -1.29
NUP88-205ENST00000572809 STAG3L4Q8TBR4 150 aa7□□□□□ -1.29
NUP88-205ENST00000572809 BRIX1Q8TDN6 353 aaKnown RBP7□□□□□ -1.29
NUP88-205ENST00000572809 UTP15Q8TED0 518 aaKnown RBP7□□□□□ -1.29
NUP88-205ENST00000572809 HAS2Q92819 552 aa7□□□□□ -1.29
NUP88-205ENST00000572809 KIAA1191Q96A73 305 aa7□□□□□ -1.29
NUP88-205ENST00000572809 ESAMQ96AP7 390 aa7□□□□□ -1.29
NUP88-205ENST00000572809 SMIM10Q96HG1 83 aa7□□□□□ -1.29
NUP88-205ENST00000572809 CNDP1Q96KN2 507 aa7□□□□□ -1.29
NUP88-205ENST00000572809 OR1F2PQ96R84 312 aa7□□□□□ -1.29
NUP88-205ENST00000572809 SLC29A3Q9BZD2 475 aa7□□□□□ -1.29
NUP88-205ENST00000572809 KLHL31Q9H511 634 aa7□□□□□ -1.29
NUP88-205ENST00000572809 NT5DC2Q9H857 520 aa7□□□□□ -1.29
NUP88-205ENST00000572809 CNOT10Q9H9A5 744 aaKnown RBP7□□□□□ -1.29
NUP88-205ENST00000572809 CLK4Q9HAZ1 481 aaKnown RBP7□□□□□ -1.29
NUP88-205ENST00000572809 AGPAT4Q9NRZ5 378 aa7□□□□□ -1.29
NUP88-205ENST00000572809 ZDHHC18Q9NUE0 388 aa7□□□□□ -1.29
NUP88-205ENST00000572809 PLA2G3Q9NZ20 509 aa7□□□□□ -1.29
NUP88-205ENST00000572809 STMN3Q9NZ72 180 aa7□□□□□ -1.29
NUP88-205ENST00000572809 WWOXQ9NZC7 414 aa7□□□□□ -1.29
NUP88-205ENST00000572809 GPRC5BQ9NZH0 403 aa7□□□□□ -1.29
NUP88-205ENST00000572809 PTGFRNQ9P2B2 879 aa7□□□□□ -1.29
NUP88-205ENST00000572809 PTBP2Q9UKA9 531 aaKnown RBP7□□□□□ -1.29
NUP88-205ENST00000572809 CSAG2Q9Y5P2 127 aa7□□□□□ -1.29
NUP88-205ENST00000572809 UBR5O95071 2799 aaPredicted RBP7□□□□□ -1.29
NUP88-205ENST00000572809 NUP210LQ5VU65 1888 aa7□□□□□ -1.29
NUP88-205ENST00000572809 DOCK10Q96BY6 2186 aa6.99□□□□□ -1.29
NUP88-205ENST00000572809 IGHV3-20A0A0C4DH32 117 aa6.99□□□□□ -1.29
NUP88-205ENST00000572809 DYTNA2CJ06 578 aa6.99□□□□□ -1.29
NUP88-205ENST00000572809 CTAGE15A4D2H0 777 aa6.99□□□□□ -1.29
NUP88-205ENST00000572809 ZNF860A6NHJ4 632 aa6.99□□□□□ -1.29
NUP88-205ENST00000572809 ANKDD1BA6NHY2 528 aa6.99□□□□□ -1.29
NUP88-205ENST00000572809 A8MUI8 341 aa6.99□□□□□ -1.29
NUP88-205ENST00000572809 MAGEB17A8MXT2 336 aa6.99□□□□□ -1.29
NUP88-205ENST00000572809 F8W735 103 aaPredicted RBP6.99□□□□□ -1.29
NUP88-205ENST00000572809 CDC123O75794 336 aaPredicted RBP6.99□□□□□ -1.29
NUP88-205ENST00000572809 SEC24DO94855 1032 aaPredicted RBP6.99□□□□□ -1.29
NUP88-205ENST00000572809 S100BP04271 92 aaPredicted RBP6.99□□□□□ -1.29
NUP88-205ENST00000572809 TUBB4AP04350 444 aa6.99□□□□□ -1.29
NUP88-205ENST00000572809 FHP07954 510 aa6.99□□□□□ -1.29
NUP88-205ENST00000572809 CELA2AP08217 269 aa6.99□□□□□ -1.29
NUP88-205ENST00000572809 ITGAMP11215 1152 aa6.99□□□□□ -1.29
NUP88-205ENST00000572809 DRD2P14416 443 aa6.99□□□□□ -1.29
NUP88-205ENST00000572809 JAK1P23458 1154 aa6.99□□□□□ -1.29
NUP88-205ENST00000572809 PHBP35232 272 aa6.99□□□□□ -1.29
NUP88-205ENST00000572809 HSPA7P48741 367 aa6.99□□□□□ -1.29
NUP88-205ENST00000572809 STXBP1P61764 594 aaKnown RBP6.99□□□□□ -1.29
NUP88-205ENST00000572809 OLR1P78380 273 aa6.99□□□□□ -1.29
NUP88-205ENST00000572809 ARG2P78540 354 aa6.99□□□□□ -1.29
NUP88-205ENST00000572809 RHAGQ02094 409 aa6.99□□□□□ -1.29
NUP88-205ENST00000572809 CDC16Q13042 620 aa6.99□□□□□ -1.29
NUP88-205ENST00000572809 MRPL49Q13405 166 aaKnown RBP6.99□□□□□ -1.29
NUP88-205ENST00000572809 SLBPQ14493 270 aaKnown RBP eCLIP6.99□□□□□ -1.29
NUP88-205ENST00000572809 OR4D1Q15615 310 aa6.99□□□□□ -1.29
NUP88-205ENST00000572809 BTBD16Q32M84 506 aa6.99□□□□□ -1.29
NUP88-205ENST00000572809 FBXO48Q5FWF7 155 aa6.99□□□□□ -1.29
NUP88-205ENST00000572809 ABHD17BQ5VST6 288 aa6.99□□□□□ -1.29
NUP88-205ENST00000572809 B3GNTL1Q67FW5 361 aaPredicted RBP6.99□□□□□ -1.29
NUP88-205ENST00000572809 PLAG1Q6DJT9 500 aa6.99□□□□□ -1.29
NUP88-205ENST00000572809 RPUSD3Q6P087 351 aaKnown RBP6.99□□□□□ -1.29
NUP88-205ENST00000572809 TMIGD1Q6UXZ0 262 aa6.99□□□□□ -1.29
NUP88-205ENST00000572809 CEP128Q6ZU80 1094 aa6.99□□□□□ -1.29
NUP88-205ENST00000572809 LANCL3Q6ZV70 420 aa6.99□□□□□ -1.29
NUP88-205ENST00000572809 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.99□□□□□ -1.29
NUP88-205ENST00000572809 CMC1Q7Z7K0 106 aa6.99□□□□□ -1.29
NUP88-205ENST00000572809 TBC1D1Q86TI0 1168 aaPredicted RBP6.99□□□□□ -1.29
NUP88-205ENST00000572809 ISCA2Q86U28 154 aa6.99□□□□□ -1.29
NUP88-205ENST00000572809 CTAGE6Q86UF2 777 aa6.99□□□□□ -1.29
NUP88-205ENST00000572809 KRT78Q8N1N4 520 aa6.99□□□□□ -1.29
NUP88-205ENST00000572809 AMER2Q8N7J2 671 aa6.99□□□□□ -1.29
NUP88-205ENST00000572809 SNX31Q8N9S9 440 aa6.99□□□□□ -1.29
NUP88-205ENST00000572809 MNS1Q8NEH6 495 aa6.99□□□□□ -1.29
NUP88-205ENST00000572809 TTLQ8NG68 377 aa6.99□□□□□ -1.29
NUP88-205ENST00000572809 CREB3L4Q8TEY5 395 aa6.99□□□□□ -1.29
NUP88-205ENST00000572809 TBC1D20Q96BZ9 403 aa6.99□□□□□ -1.29
NUP88-205ENST00000572809 FAR2Q96K12 515 aa6.99□□□□□ -1.29
NUP88-205ENST00000572809 PTCHD1Q96NR3 888 aa6.99□□□□□ -1.29
NUP88-205ENST00000572809 BARD1Q99728 777 aaKnown RBP6.99□□□□□ -1.29
NUP88-205ENST00000572809 TMEM79Q9BSE2 394 aa6.99□□□□□ -1.29
NUP88-205ENST00000572809 CD244Q9BZW8 370 aa6.99□□□□□ -1.29
NUP88-205ENST00000572809 PITHD1Q9GZP4 211 aaPredicted RBP6.99□□□□□ -1.29
NUP88-205ENST00000572809 TSPYL1Q9H0U9 437 aa6.99□□□□□ -1.29
NUP88-205ENST00000572809 GSX1Q9H4S2 264 aaPredicted RBP6.99□□□□□ -1.29
NUP88-205ENST00000572809 NMRAL1Q9HBL8 299 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms