RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 UGDHO60701 494 aa15.95■□□□□ 0.14
MAP1LC3B-208ENST00000570189 CTNSO60931 367 aa15.95■□□□□ 0.14
MAP1LC3B-208ENST00000570189 SLC25A12O75746 678 aa15.95■□□□□ 0.14
MAP1LC3B-208ENST00000570189 UNC5CO95185 931 aa15.95■□□□□ 0.14
MAP1LC3B-208ENST00000570189 C2P06681 752 aa15.95■□□□□ 0.14
MAP1LC3B-208ENST00000570189 PHBP35232 272 aa15.95■□□□□ 0.14
MAP1LC3B-208ENST00000570189 CA7P43166 264 aa15.95■□□□□ 0.14
MAP1LC3B-208ENST00000570189 HNRNPFP52597 415 aaKnown RBP15.95■□□□□ 0.14
MAP1LC3B-208ENST00000570189 PLA2G16P53816 162 aa15.95■□□□□ 0.14
MAP1LC3B-208ENST00000570189 KCNK10P57789 538 aa15.95■□□□□ 0.14
MAP1LC3B-208ENST00000570189 RBPJQ06330 500 aa15.95■□□□□ 0.14
MAP1LC3B-208ENST00000570189 SETDB1Q15047 1291 aa15.95■□□□□ 0.14
MAP1LC3B-208ENST00000570189 ELAVL1Q15717 326 aaKnown RBP15.95■□□□□ 0.14
MAP1LC3B-208ENST00000570189 ZNF468Q5VIY5 522 aaPredicted RBP15.95■□□□□ 0.14
MAP1LC3B-208ENST00000570189 ADNP2Q6IQ32 1131 aa15.95■□□□□ 0.14
MAP1LC3B-208ENST00000570189 GRHL2Q6ISB3 625 aa15.95■□□□□ 0.14
MAP1LC3B-208ENST00000570189 MED27Q6P2C8 311 aa15.95■□□□□ 0.14
MAP1LC3B-208ENST00000570189 MTFR2Q6P444 385 aa15.95■□□□□ 0.14
MAP1LC3B-208ENST00000570189 Q6ZPB1 254 aaPredicted RBP15.95■□□□□ 0.14
MAP1LC3B-208ENST00000570189 UBE3DQ7Z6J8 389 aa15.95■□□□□ 0.14
MAP1LC3B-208ENST00000570189 SIAH3Q8IW03 269 aa15.95■□□□□ 0.14
MAP1LC3B-208ENST00000570189 CYP4X1Q8N118 509 aa15.95■□□□□ 0.14
MAP1LC3B-208ENST00000570189 MMGT1Q8N4V1 131 aa15.95■□□□□ 0.14
MAP1LC3B-208ENST00000570189 TMEM52Q8NDY8 209 aa15.95■□□□□ 0.14
MAP1LC3B-208ENST00000570189 NXNL1Q96CM4 212 aa15.95■□□□□ 0.14
MAP1LC3B-208ENST00000570189 GPR137Q96N19 417 aa15.95■□□□□ 0.14
MAP1LC3B-208ENST00000570189 DEFB126Q9BYW3 111 aa15.95■□□□□ 0.14
MAP1LC3B-208ENST00000570189 COPS7BQ9H9Q2 264 aaPredicted RBP15.95■□□□□ 0.14
MAP1LC3B-208ENST00000570189 ZNF223Q9UK11 482 aaPredicted RBP15.95■□□□□ 0.14
MAP1LC3B-208ENST00000570189 ZNF835Q9Y2P0 537 aa15.95■□□□□ 0.14
MAP1LC3B-208ENST00000570189 ESYT3A0FGR9 886 aa15.94■□□□□ 0.14
MAP1LC3B-208ENST00000570189 SUPT3HB4E1H0 165 aa15.94■□□□□ 0.14
MAP1LC3B-208ENST00000570189 UBXN8O00124 270 aa15.94■□□□□ 0.14
MAP1LC3B-208ENST00000570189 SUPT3HO75486 399 aa15.94■□□□□ 0.14
MAP1LC3B-208ENST00000570189 MYO1DO94832 1006 aa15.94■□□□□ 0.14
MAP1LC3B-208ENST00000570189 KLHL2O95198 593 aa15.94■□□□□ 0.14
MAP1LC3B-208ENST00000570189 EPB42P16452 691 aa15.94■□□□□ 0.14
MAP1LC3B-208ENST00000570189 CERS1P27544 350 aa15.94■□□□□ 0.14
MAP1LC3B-208ENST00000570189 GMPRP36959 345 aa15.94■□□□□ 0.14
MAP1LC3B-208ENST00000570189 DCTP40126 519 aa15.94■□□□□ 0.14
MAP1LC3B-208ENST00000570189 PIK3CBP42338 1070 aa15.94■□□□□ 0.14
MAP1LC3B-208ENST00000570189 MSH2P43246 934 aa15.94■□□□□ 0.14
MAP1LC3B-208ENST00000570189 MAGEA12P43365 314 aa15.94■□□□□ 0.14
MAP1LC3B-208ENST00000570189 ALDH18A1P54886 795 aaKnown RBP15.94■□□□□ 0.14
MAP1LC3B-208ENST00000570189 PMP22Q01453 160 aa15.94■□□□□ 0.14
MAP1LC3B-208ENST00000570189 SLC7A5Q01650 507 aa15.94■□□□□ 0.14
MAP1LC3B-208ENST00000570189 PCBP2Q15366 365 aaKnown RBP eCLIP15.94■□□□□ 0.14
MAP1LC3B-208ENST00000570189 LIPJQ5W064 366 aa15.94■□□□□ 0.14
MAP1LC3B-208ENST00000570189 HIST2H2BCQ6DN03 193 aa15.94■□□□□ 0.14
MAP1LC3B-208ENST00000570189 ZNF793Q6ZN11 406 aa15.94■□□□□ 0.14
MAP1LC3B-208ENST00000570189 CHSY3Q70JA7 882 aa15.94■□□□□ 0.14
MAP1LC3B-208ENST00000570189 FJX1Q86VR8 437 aa15.94■□□□□ 0.14
MAP1LC3B-208ENST00000570189 TMEM132CQ8N3T6 1108 aa15.94■□□□□ 0.14
MAP1LC3B-208ENST00000570189 POGLUT1Q8NBL1 392 aa15.94■□□□□ 0.14
MAP1LC3B-208ENST00000570189 OR7G3Q8NG95 312 aa15.94■□□□□ 0.14
MAP1LC3B-208ENST00000570189 GPR78Q96P69 363 aa15.94■□□□□ 0.14
MAP1LC3B-208ENST00000570189 F2RL3Q96RI0 385 aa15.94■□□□□ 0.14
MAP1LC3B-208ENST00000570189 HES7Q9BYE0 225 aa15.94■□□□□ 0.14
MAP1LC3B-208ENST00000570189 SNX15Q9NRS6 342 aa15.94■□□□□ 0.14
MAP1LC3B-208ENST00000570189 ANKRD10Q9NXR5 420 aa15.94■□□□□ 0.14
MAP1LC3B-208ENST00000570189 PSD3Q9NYI0 1048 aa15.94■□□□□ 0.14
MAP1LC3B-208ENST00000570189 VTI1BQ9UEU0 232 aa15.94■□□□□ 0.14
MAP1LC3B-208ENST00000570189 NOTCH2Q04721 2471 aa15.94■□□□□ 0.14
MAP1LC3B-208ENST00000570189 A0A0G2JN53 185 aa15.93■□□□□ 0.14
MAP1LC3B-208ENST00000570189 ZG16O60844 167 aa15.93■□□□□ 0.14
MAP1LC3B-208ENST00000570189 ALDOAP04075 364 aaKnown RBP15.93■□□□□ 0.14
MAP1LC3B-208ENST00000570189 TUBB4AP04350 444 aa15.93■□□□□ 0.14
MAP1LC3B-208ENST00000570189 HIST1H1TP22492 207 aaPredicted RBP15.93■□□□□ 0.14
MAP1LC3B-208ENST00000570189 ATP5A1P25705 553 aaKnown RBP15.93■□□□□ 0.14
MAP1LC3B-208ENST00000570189 SERPINB8P50452 374 aa15.93■□□□□ 0.14
MAP1LC3B-208ENST00000570189 IGLV3-21P80748 117 aaPredicted RBP15.93■□□□□ 0.14
MAP1LC3B-208ENST00000570189 OC90Q02509 493 aaPredicted RBP15.93■□□□□ 0.14
MAP1LC3B-208ENST00000570189 SLC13A2Q13183 592 aa15.93■□□□□ 0.14
MAP1LC3B-208ENST00000570189 SERTAD2Q14140 314 aa15.93■□□□□ 0.14
MAP1LC3B-208ENST00000570189 MROH9Q5TGP6 573 aa15.93■□□□□ 0.14
MAP1LC3B-208ENST00000570189 C1QL3Q5VWW1 255 aa15.93■□□□□ 0.14
MAP1LC3B-208ENST00000570189 BNC2Q6ZN30 1099 aaPredicted RBP15.93■□□□□ 0.14
MAP1LC3B-208ENST00000570189 GALNTL5Q7Z4T8 443 aa15.93■□□□□ 0.14
MAP1LC3B-208ENST00000570189 GPALPP1Q8IXQ4 340 aa15.93■□□□□ 0.14
MAP1LC3B-208ENST00000570189 ACOT4Q8N9L9 421 aa15.93■□□□□ 0.14
MAP1LC3B-208ENST00000570189 MORN4Q8NDC4 146 aa15.93■□□□□ 0.14
MAP1LC3B-208ENST00000570189 OR8K3Q8NH51 312 aa15.93■□□□□ 0.14
MAP1LC3B-208ENST00000570189 OR14A16Q8NHC5 309 aa15.93■□□□□ 0.14
MAP1LC3B-208ENST00000570189 KCTD4Q8WVF5 259 aa15.93■□□□□ 0.14
MAP1LC3B-208ENST00000570189 DAZLQ92904 295 aaKnown RBP15.93■□□□□ 0.14
MAP1LC3B-208ENST00000570189 EXT2Q93063 718 aa15.93■□□□□ 0.14
MAP1LC3B-208ENST00000570189 CMTM7Q96FZ5 175 aa15.93■□□□□ 0.14
MAP1LC3B-208ENST00000570189 CSF3RQ99062 836 aa15.93■□□□□ 0.14
MAP1LC3B-208ENST00000570189 KLHL1Q9NR64 748 aa15.93■□□□□ 0.14
MAP1LC3B-208ENST00000570189 NINJ2Q9NZG7 142 aa15.93■□□□□ 0.14
MAP1LC3B-208ENST00000570189 MTRF1LQ9UGC7 380 aaKnown RBP15.93■□□□□ 0.14
MAP1LC3B-208ENST00000570189 PPT2Q9UMR5 302 aa15.93■□□□□ 0.14
MAP1LC3B-208ENST00000570189 PCNX1Q96RV3 2341 aa15.93■□□□□ 0.14
MAP1LC3B-208ENST00000570189 TRBV11-1A0A0K0K1C0 115 aa15.92■□□□□ 0.14
MAP1LC3B-208ENST00000570189 H0YIV9 168 aa15.92■□□□□ 0.14
MAP1LC3B-208ENST00000570189 ALDH6A1Q02252 535 aaKnown RBP15.92■□□□□ 0.14
MAP1LC3B-208ENST00000570189 BIKQ13323 160 aa15.92■□□□□ 0.14
MAP1LC3B-208ENST00000570189 ART3Q13508 389 aa15.92■□□□□ 0.14
MAP1LC3B-208ENST00000570189 GLE1Q53GS7 698 aaKnown RBP15.92■□□□□ 0.14
MAP1LC3B-208ENST00000570189 DEPDC1Q5TB30 811 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms