RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 ZNF888P0CJ79 500 aaPredicted RBP7.99□□□□□ -1.13
SMG1-216ENST00000569122 PAX1P15863 534 aa7.99□□□□□ -1.13
SMG1-216ENST00000569122 ENDOUP21128 410 aaKnown RBP7.99□□□□□ -1.13
SMG1-216ENST00000569122 ZNF10P21506 573 aaPredicted RBP7.99□□□□□ -1.13
SMG1-216ENST00000569122 HPDP32754 393 aaPredicted RBP7.99□□□□□ -1.13
SMG1-216ENST00000569122 MARCKSL1P49006 195 aa7.99□□□□□ -1.13
SMG1-216ENST00000569122 DNASE1L1P49184 302 aa7.99□□□□□ -1.13
SMG1-216ENST00000569122 PCYT1AP49585 367 aa7.99□□□□□ -1.13
SMG1-216ENST00000569122 TBPL1P62380 186 aa7.99□□□□□ -1.13
SMG1-216ENST00000569122 KCNJ2P63252 427 aa7.99□□□□□ -1.13
SMG1-216ENST00000569122 OLR1P78380 273 aa7.99□□□□□ -1.13
SMG1-216ENST00000569122 SLC13A2Q13183 592 aa7.99□□□□□ -1.13
SMG1-216ENST00000569122 RCAN2Q14206 197 aa7.99□□□□□ -1.13
SMG1-216ENST00000569122 KCNJ11Q14654 390 aa7.99□□□□□ -1.13
SMG1-216ENST00000569122 IQCB1Q15051 598 aa7.99□□□□□ -1.13
SMG1-216ENST00000569122 MPEG1Q2M385 716 aa7.99□□□□□ -1.13
SMG1-216ENST00000569122 CHRFAM7AQ494W8 412 aa7.99□□□□□ -1.13
SMG1-216ENST00000569122 LCTLQ6UWM7 567 aa7.99□□□□□ -1.13
SMG1-216ENST00000569122 SYDE1Q6ZW31 735 aaPredicted RBP7.99□□□□□ -1.13
SMG1-216ENST00000569122 PLEKHM3Q6ZWE6 761 aa7.99□□□□□ -1.13
SMG1-216ENST00000569122 UBE2R2Q712K3 238 aaPredicted RBP7.99□□□□□ -1.13
SMG1-216ENST00000569122 ZNF595Q8IYB9 648 aa7.99□□□□□ -1.13
SMG1-216ENST00000569122 LRRC25Q8N386 305 aaPredicted RBP7.99□□□□□ -1.13
SMG1-216ENST00000569122 RASGEF1CQ8N431 466 aa7.99□□□□□ -1.13
SMG1-216ENST00000569122 SLC15A4Q8N697 577 aa7.99□□□□□ -1.13
SMG1-216ENST00000569122 ABHD11Q8NFV4 315 aa7.99□□□□□ -1.13
SMG1-216ENST00000569122 GABPB2Q8TAK5 448 aaPredicted RBP7.99□□□□□ -1.13
SMG1-216ENST00000569122 LPGAT1Q92604 370 aa7.99□□□□□ -1.13
SMG1-216ENST00000569122 UCN3Q969E3 161 aa7.99□□□□□ -1.13
SMG1-216ENST00000569122 FAR2Q96K12 515 aa7.99□□□□□ -1.13
SMG1-216ENST00000569122 SLC30A3Q99726 388 aa7.99□□□□□ -1.13
SMG1-216ENST00000569122 FAM118BQ9BPY3 351 aa7.99□□□□□ -1.13
SMG1-216ENST00000569122 SFXN3Q9BWM7 321 aa7.99□□□□□ -1.13
SMG1-216ENST00000569122 NPLQ9BXD5 320 aaPredicted RBP7.99□□□□□ -1.13
SMG1-216ENST00000569122 AMBRA1Q9C0C7 1298 aa7.99□□□□□ -1.13
SMG1-216ENST00000569122 IL22Q9GZX6 179 aa7.99□□□□□ -1.13
SMG1-216ENST00000569122 RHBGQ9H310 441 aa7.99□□□□□ -1.13
SMG1-216ENST00000569122 CXorf56Q9H5V9 222 aa7.99□□□□□ -1.13
SMG1-216ENST00000569122 ZNF703Q9H7S9 590 aaPredicted RBP7.99□□□□□ -1.13
SMG1-216ENST00000569122 ETNK1Q9HBU6 452 aa7.99□□□□□ -1.13
SMG1-216ENST00000569122 CHRAC1Q9NRG0 131 aa7.99□□□□□ -1.13
SMG1-216ENST00000569122 PRTFDC1Q9NRG1 225 aa7.99□□□□□ -1.13
SMG1-216ENST00000569122 BFARQ9NZS9 450 aa7.99□□□□□ -1.13
SMG1-216ENST00000569122 ZFP69BQ9UJL9 534 aa7.99□□□□□ -1.13
SMG1-216ENST00000569122 MBD3L3A6NE82 208 aaPredicted RBP7.98□□□□□ -1.13
SMG1-216ENST00000569122 GOLGA6L19H0YKK7 550 aa7.98□□□□□ -1.13
SMG1-216ENST00000569122 DYRK3O43781 588 aa7.98□□□□□ -1.13
SMG1-216ENST00000569122 HIST1H2AGP0C0S8 130 aaPredicted RBP7.98□□□□□ -1.13
SMG1-216ENST00000569122 TMIGD3P0DMS9 266 aaPredicted RBP7.98□□□□□ -1.13
SMG1-216ENST00000569122 CDH1P12830 882 aa7.98□□□□□ -1.13
SMG1-216ENST00000569122 PAMP19021 973 aa7.98□□□□□ -1.13
SMG1-216ENST00000569122 HIST1H2ADP20671 130 aa7.98□□□□□ -1.13
SMG1-216ENST00000569122 OGNP20774 298 aaKnown RBP7.98□□□□□ -1.13
SMG1-216ENST00000569122 GCKP35557 465 aa7.98□□□□□ -1.13
SMG1-216ENST00000569122 MC3RP41968 323 aa7.98□□□□□ -1.13
SMG1-216ENST00000569122 NPY2RP49146 381 aa7.98□□□□□ -1.13
SMG1-216ENST00000569122 PTH2RP49190 550 aa7.98□□□□□ -1.13
SMG1-216ENST00000569122 HK2P52789 917 aa7.98□□□□□ -1.13
SMG1-216ENST00000569122 STXBP1P61764 594 aaKnown RBP7.98□□□□□ -1.13
SMG1-216ENST00000569122 GAB1Q13480 694 aa7.98□□□□□ -1.13
SMG1-216ENST00000569122 EFTUD2Q15029 972 aaKnown RBP eCLIP7.98□□□□□ -1.135e-7■■■■□ 26.2
SMG1-216ENST00000569122 ETFDHQ16134 617 aa7.98□□□□□ -1.13
SMG1-216ENST00000569122 PIGGQ5H8A4 983 aa7.98□□□□□ -1.13
SMG1-216ENST00000569122 TBCELQ5QJ74 424 aa7.98□□□□□ -1.13
SMG1-216ENST00000569122 ARMC3Q5W041 872 aa7.98□□□□□ -1.13
SMG1-216ENST00000569122 SCUBE1Q8IWY4 988 aa7.98□□□□□ -1.13
SMG1-216ENST00000569122 ZNF441Q8N8Z8 693 aa7.98□□□□□ -1.13
SMG1-216ENST00000569122 PRELID2Q8N945 189 aa7.98□□□□□ -1.13
SMG1-216ENST00000569122 OR4K1Q8NGD4 311 aa7.98□□□□□ -1.13
SMG1-216ENST00000569122 OR14A16Q8NHC5 309 aa7.98□□□□□ -1.13
SMG1-216ENST00000569122 MBD3L2Q8NHZ7 208 aaPredicted RBP7.98□□□□□ -1.13
SMG1-216ENST00000569122 SLC22A8Q8TCC7 542 aa7.98□□□□□ -1.13
SMG1-216ENST00000569122 UTP15Q8TED0 518 aaKnown RBP7.98□□□□□ -1.13
SMG1-216ENST00000569122 KCNJ9Q92806 393 aa7.98□□□□□ -1.13
SMG1-216ENST00000569122 FAM136AQ96C01 138 aa7.98□□□□□ -1.13
SMG1-216ENST00000569122 HIST1H2AHQ96KK5 128 aa7.98□□□□□ -1.13
SMG1-216ENST00000569122 TIMP4Q99727 224 aa7.98□□□□□ -1.13
SMG1-216ENST00000569122 TM9SF2Q99805 663 aa7.98□□□□□ -1.13
SMG1-216ENST00000569122 HIST1H2AJQ99878 128 aa7.98□□□□□ -1.13
SMG1-216ENST00000569122 H2AFJQ9BTM1 129 aa7.98□□□□□ -1.13
SMG1-216ENST00000569122 PRDM14Q9GZV8 571 aa7.98□□□□□ -1.13
SMG1-216ENST00000569122 UBTD1Q9HAC8 227 aa7.98□□□□□ -1.13
SMG1-216ENST00000569122 TREX1Q9NSU2 369 aa7.98□□□□□ -1.13
SMG1-216ENST00000569122 INTS10Q9NVR2 710 aaKnown RBP7.98□□□□□ -1.13
SMG1-216ENST00000569122 COPS7AQ9UBW8 275 aa7.98□□□□□ -1.13
SMG1-216ENST00000569122 ZNF223Q9UK11 482 aaPredicted RBP7.98□□□□□ -1.13
SMG1-216ENST00000569122 CRYL1Q9Y2S2 319 aa7.98□□□□□ -1.13
SMG1-216ENST00000569122 NPFFR2Q9Y5X5 522 aa7.98□□□□□ -1.13
SMG1-216ENST00000569122 MAD1L1Q9Y6D9 718 aa7.98□□□□□ -1.13
SMG1-216ENST00000569122 COMMD10Q9Y6G5 202 aa7.98□□□□□ -1.13
SMG1-216ENST00000569122 DNAJC13O75165 2243 aa7.97□□□□□ -1.13
SMG1-216ENST00000569122 A0A1W2PPR1 153 aa7.97□□□□□ -1.13
SMG1-216ENST00000569122 PHF1O43189 567 aaPredicted RBP7.97□□□□□ -1.13
SMG1-216ENST00000569122 CTIFO43310 598 aaKnown RBP7.97□□□□□ -1.13
SMG1-216ENST00000569122 PRKNO60260 465 aaPredicted RBP7.97□□□□□ -1.13
SMG1-216ENST00000569122 VAPBO95292 243 aa7.97□□□□□ -1.13
SMG1-216ENST00000569122 C8GP07360 202 aa7.97□□□□□ -1.13
SMG1-216ENST00000569122 APRTP07741 180 aa7.97□□□□□ -1.13
SMG1-216ENST00000569122 CCL3P10147 92 aa7.97□□□□□ -1.13
SMG1-216ENST00000569122 NPPBP16860 134 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms