RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 MRM1Q6IN84 353 aaKnown RBP15.8■□□□□ 0.12
COMMD4-224ENST00000568877 SHISA6Q6ZSJ9 500 aa15.8■□□□□ 0.12
COMMD4-224ENST00000568877 LAPTM4BQ86VI4 370 aa15.8■□□□□ 0.12
COMMD4-224ENST00000568877 PRSS58Q8IYP2 241 aa15.8■□□□□ 0.12
COMMD4-224ENST00000568877 OR2Y1Q8NGV0 311 aa15.8■□□□□ 0.12
COMMD4-224ENST00000568877 PIWIL2Q8TC59 973 aaKnown RBP15.8■□□□□ 0.12
COMMD4-224ENST00000568877 ADAMTS18Q8TE60 1221 aa15.8■□□□□ 0.12
COMMD4-224ENST00000568877 C11orf24Q96F05 449 aaPredicted RBP15.8■□□□□ 0.12
COMMD4-224ENST00000568877 SLC45A3Q96JT2 553 aa15.8■□□□□ 0.12
COMMD4-224ENST00000568877 RBCK1Q9BYM8 510 aa15.8■□□□□ 0.12
COMMD4-224ENST00000568877 LRTM1Q9HBL6 345 aa15.8■□□□□ 0.12
COMMD4-224ENST00000568877 RIC8BQ9NVN3 520 aa15.8■□□□□ 0.12
COMMD4-224ENST00000568877 C1orf109Q9NX04 203 aa15.8■□□□□ 0.12
COMMD4-224ENST00000568877 LYARQ9NX58 379 aaKnown RBP15.8■□□□□ 0.12
COMMD4-224ENST00000568877 SIRT5Q9NXA8 310 aa15.8■□□□□ 0.12
COMMD4-224ENST00000568877 VTI1BQ9UEU0 232 aa15.8■□□□□ 0.12
COMMD4-224ENST00000568877 PHF11Q9UIL8 331 aa15.8■□□□□ 0.12
COMMD4-224ENST00000568877 FBXW2Q9UKT8 454 aa15.8■□□□□ 0.12
COMMD4-224ENST00000568877 ASB4Q9Y574 426 aa15.8■□□□□ 0.12
COMMD4-224ENST00000568877 SPACA6W5XKT8 324 aa15.8■□□□□ 0.12
COMMD4-224ENST00000568877 FER1L5A0AVI2 2057 aa15.79■□□□□ 0.12
COMMD4-224ENST00000568877 A0A087WV48 116 aa15.79■□□□□ 0.12
COMMD4-224ENST00000568877 ATP6AP2A0A1C7CYW4 349 aa15.79■□□□□ 0.12
COMMD4-224ENST00000568877 FAM227AF5H4B4 570 aa15.79■□□□□ 0.12
COMMD4-224ENST00000568877 LSM1O15116 133 aaKnown RBP15.79■□□□□ 0.12
COMMD4-224ENST00000568877 HDAC3O15379 428 aa15.79■□□□□ 0.12
COMMD4-224ENST00000568877 EFSO43281 561 aa15.79■□□□□ 0.12
COMMD4-224ENST00000568877 SEC22BO75396 215 aa15.79■□□□□ 0.12
COMMD4-224ENST00000568877 ATP6AP2O75787 350 aa15.79■□□□□ 0.12
COMMD4-224ENST00000568877 FHP07954 510 aa15.79■□□□□ 0.12
COMMD4-224ENST00000568877 JAK1P23458 1154 aa15.79■□□□□ 0.12
COMMD4-224ENST00000568877 MDH1P40925 334 aaKnown RBP15.79■□□□□ 0.12
COMMD4-224ENST00000568877 FOLR3P41439 243 aa15.79■□□□□ 0.12
COMMD4-224ENST00000568877 HK2P52789 917 aa15.79■□□□□ 0.12
COMMD4-224ENST00000568877 MAPK12P53778 367 aa15.79■□□□□ 0.12
COMMD4-224ENST00000568877 RAE1P78406 368 aaKnown RBP15.79■□□□□ 0.12
COMMD4-224ENST00000568877 TLE3Q04726 772 aa15.79■□□□□ 0.12
COMMD4-224ENST00000568877 KLC1Q07866 573 aa15.79■□□□□ 0.12
COMMD4-224ENST00000568877 KIAA0040Q15053 153 aa15.79■□□□□ 0.12
COMMD4-224ENST00000568877 TUBB8Q3ZCM7 444 aa15.79■□□□□ 0.12
COMMD4-224ENST00000568877 BROXQ5VW32 411 aa15.79■□□□□ 0.12
COMMD4-224ENST00000568877 GALNT18Q6P9A2 607 aa15.79■□□□□ 0.12
COMMD4-224ENST00000568877 MED25Q71SY5 747 aa15.79■□□□□ 0.12
COMMD4-224ENST00000568877 GPR180Q86V85 440 aa15.79■□□□□ 0.12
COMMD4-224ENST00000568877 TMEM151BQ8IW70 566 aa15.79■□□□□ 0.12
COMMD4-224ENST00000568877 WDR75Q8IWA0 830 aaKnown RBP15.79■□□□□ 0.12
COMMD4-224ENST00000568877 STARD8Q92502 1023 aa15.79■□□□□ 0.12
COMMD4-224ENST00000568877 PPP1R36Q96LQ0 422 aa15.79■□□□□ 0.12
COMMD4-224ENST00000568877 PPP3R2Q96LZ3 170 aa15.79■□□□□ 0.12
COMMD4-224ENST00000568877 NUF2Q9BZD4 464 aa15.79■□□□□ 0.12
COMMD4-224ENST00000568877 LANCL2Q9NS86 450 aa15.79■□□□□ 0.12
COMMD4-224ENST00000568877 MS4A12Q9NXJ0 267 aa15.79■□□□□ 0.12
COMMD4-224ENST00000568877 MCM8Q9UJA3 840 aa15.79■□□□□ 0.12
COMMD4-224ENST00000568877 ATG4BQ9Y4P1 393 aa15.79■□□□□ 0.12
COMMD4-224ENST00000568877 SCN3AQ9NY46 2000 aa15.78■□□□□ 0.12
COMMD4-224ENST00000568877 TCP11X1B4DZS4 312 aa15.78■□□□□ 0.12
COMMD4-224ENST00000568877 CYR61O00622 381 aa15.78■□□□□ 0.12
COMMD4-224ENST00000568877 PROM1O43490 865 aa15.78■□□□□ 0.12
COMMD4-224ENST00000568877 PCDH7O60245 1069 aa15.78■□□□□ 0.12
COMMD4-224ENST00000568877 B4GALT2O60909 372 aa15.78■□□□□ 0.12
COMMD4-224ENST00000568877 CREG1O75629 220 aa15.78■□□□□ 0.12
COMMD4-224ENST00000568877 MYO1DO94832 1006 aa15.78■□□□□ 0.12
COMMD4-224ENST00000568877 UMODP07911 640 aa15.78■□□□□ 0.12
COMMD4-224ENST00000568877 WT1P19544 449 aaPredicted RBP15.78■□□□□ 0.12
COMMD4-224ENST00000568877 CPN2P22792 545 aa15.78■□□□□ 0.12
COMMD4-224ENST00000568877 TIA1P31483 386 aaKnown RBP eCLIP15.78■□□□□ 0.12
COMMD4-224ENST00000568877 HNRNPH2P55795 449 aaKnown RBP15.78■□□□□ 0.12
COMMD4-224ENST00000568877 GALNTL6Q49A17 601 aa15.78■□□□□ 0.12
COMMD4-224ENST00000568877 MINDY4Q4G0A6 757 aa15.78■□□□□ 0.12
COMMD4-224ENST00000568877 RFTN2Q52LD8 501 aaPredicted RBP15.78■□□□□ 0.12
COMMD4-224ENST00000568877 MFSD4BQ5TF39 518 aa15.78■□□□□ 0.12
COMMD4-224ENST00000568877 FAM47EQ6ZV65 393 aa15.78■□□□□ 0.12
COMMD4-224ENST00000568877 EFCAB3Q8N7B9 438 aa15.78■□□□□ 0.12
COMMD4-224ENST00000568877 FAM47BQ8NA70 645 aa15.78■□□□□ 0.12
COMMD4-224ENST00000568877 TUBGCP3Q96CW5 907 aa15.78■□□□□ 0.12
COMMD4-224ENST00000568877 CSF3RQ99062 836 aa15.78■□□□□ 0.12
COMMD4-224ENST00000568877 CRB3Q9BUF7 120 aa15.78■□□□□ 0.12
COMMD4-224ENST00000568877 CCDC134Q9H6E4 229 aa15.78■□□□□ 0.12
COMMD4-224ENST00000568877 MEAF6Q9HAF1 191 aa15.78■□□□□ 0.12
COMMD4-224ENST00000568877 C3orf18Q9UK00 162 aa15.78■□□□□ 0.12
COMMD4-224ENST00000568877 MKL2Q9ULH7 1088 aa15.78■□□□□ 0.12
COMMD4-224ENST00000568877 GNG14A0A1W2PPG7 69 aa15.77■□□□□ 0.12
COMMD4-224ENST00000568877 A0A1W2PR48 441 aa15.77■□□□□ 0.12
COMMD4-224ENST00000568877 TRPC5OSA6NMA1 111 aa15.77■□□□□ 0.12
COMMD4-224ENST00000568877 IDSB3KWA1 339 aa15.77■□□□□ 0.12
COMMD4-224ENST00000568877 PEX11AO75192 247 aa15.77■□□□□ 0.12
COMMD4-224ENST00000568877 CDC123O75794 336 aaPredicted RBP15.77■□□□□ 0.12
COMMD4-224ENST00000568877 RECKO95980 971 aa15.77■□□□□ 0.12
COMMD4-224ENST00000568877 HEXBP07686 556 aa15.77■□□□□ 0.12
COMMD4-224ENST00000568877 ANXA4P09525 319 aaPredicted RBP15.77■□□□□ 0.12
COMMD4-224ENST00000568877 ITPKBP27987 946 aa15.77■□□□□ 0.12
COMMD4-224ENST00000568877 TLX1P31314 330 aaPredicted RBP15.77■□□□□ 0.12
COMMD4-224ENST00000568877 BUD31P41223 144 aaPredicted RBP15.77■□□□□ 0.12
COMMD4-224ENST00000568877 EMP2P54851 167 aa15.77■□□□□ 0.12
COMMD4-224ENST00000568877 TRA2BP62995 288 aaKnown RBP15.77■□□□□ 0.12
COMMD4-224ENST00000568877 SSPNQ14714 243 aa15.77■□□□□ 0.12
COMMD4-224ENST00000568877 ATP6AP1LQ52LC2 224 aa15.77■□□□□ 0.12
COMMD4-224ENST00000568877 NOXRED1Q6NXP6 359 aa15.77■□□□□ 0.12
COMMD4-224ENST00000568877 CCDC81Q6ZN84 652 aa15.77■□□□□ 0.12
COMMD4-224ENST00000568877 EBPLQ9BY08 206 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms