RNA–Protein interactions for RNA: ENST00000568605.5

CLK3-224, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,047 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-224ENST00000568605 BUD31P41223 144 aaPredicted RBP12.22□□□□□ -0.45
CLK3-224ENST00000568605 LIM2P55344 173 aa12.22□□□□□ -0.45
CLK3-224ENST00000568605 HSD17B7P56937 341 aa12.22□□□□□ -0.45
CLK3-224ENST00000568605 OR4D2P58180 307 aa12.22□□□□□ -0.45
CLK3-224ENST00000568605 DNAJB13P59910 316 aa12.22□□□□□ -0.45
CLK3-224ENST00000568605 ZNF33BQ06732 778 aa12.22□□□□□ -0.45
CLK3-224ENST00000568605 ACTN3Q08043 901 aaPredicted RBP12.22□□□□□ -0.45
CLK3-224ENST00000568605 ZNF844Q08AG5 666 aa12.22□□□□□ -0.45
CLK3-224ENST00000568605 SLC13A2Q13183 592 aa12.22□□□□□ -0.45
CLK3-224ENST00000568605 RAPSNQ13702 412 aa12.22□□□□□ -0.45
CLK3-224ENST00000568605 PCOLCEQ15113 449 aa12.22□□□□□ -0.45
CLK3-224ENST00000568605 UNC50Q53HI1 259 aa12.22□□□□□ -0.45
CLK3-224ENST00000568605 AGAP7PQ5VUJ5 663 aa12.22□□□□□ -0.45
CLK3-224ENST00000568605 LIPMQ5VYY2 423 aa12.22□□□□□ -0.45
CLK3-224ENST00000568605 OR4C11Q6IEV9 310 aa12.22□□□□□ -0.45
CLK3-224ENST00000568605 LETMD1Q6P1Q0 360 aa12.22□□□□□ -0.45
CLK3-224ENST00000568605 CYP20A1Q6UW02 462 aa12.22□□□□□ -0.45
CLK3-224ENST00000568605 LANCL3Q6ZV70 420 aa12.22□□□□□ -0.45
CLK3-224ENST00000568605 PAGE2Q7Z2X7 111 aa12.22□□□□□ -0.45
CLK3-224ENST00000568605 ANKRD37Q7Z713 158 aa12.22□□□□□ -0.45
CLK3-224ENST00000568605 HOMEZQ8IX15 550 aa12.22□□□□□ -0.45
CLK3-224ENST00000568605 PARP9Q8IXQ6 854 aa12.22□□□□□ -0.45
CLK3-224ENST00000568605 ZCCHC7Q8N3Z6 543 aaKnown RBP12.22□□□□□ -0.45
CLK3-224ENST00000568605 EFCAB3Q8N7B9 438 aa12.22□□□□□ -0.45
CLK3-224ENST00000568605 CCNYL1Q8N7R7 359 aa12.22□□□□□ -0.45
CLK3-224ENST00000568605 ACOT4Q8N9L9 421 aa12.22□□□□□ -0.45
CLK3-224ENST00000568605 TEX19Q8NA77 164 aa12.22□□□□□ -0.45
CLK3-224ENST00000568605 SELENOMQ8WWX9 145 aa12.22□□□□□ -0.45
CLK3-224ENST00000568605 AGAP4Q96P64 663 aa12.22□□□□□ -0.45
CLK3-224ENST00000568605 STMN4Q9H169 189 aaPredicted RBP12.22□□□□□ -0.45
CLK3-224ENST00000568605 EPS8L2Q9H6S3 715 aa12.22□□□□□ -0.45
CLK3-224ENST00000568605 BRF2Q9HAW0 419 aa12.22□□□□□ -0.45
CLK3-224ENST00000568605 PRDM7Q9NQW5 492 aa12.22□□□□□ -0.45
CLK3-224ENST00000568605 PRTFDC1Q9NRG1 225 aa12.22□□□□□ -0.45
CLK3-224ENST00000568605 LYARQ9NX58 379 aaKnown RBP12.22□□□□□ -0.45
CLK3-224ENST00000568605 EXPH5Q8NEV8 1989 aa12.21□□□□□ -0.45
CLK3-224ENST00000568605 ARHGAP10A1A4S6 786 aa12.21□□□□□ -0.45
CLK3-224ENST00000568605 FOXO6A8MYZ6 492 aa12.21□□□□□ -0.45
CLK3-224ENST00000568605 G3V2L1 256 aa12.21□□□□□ -0.45
CLK3-224ENST00000568605 SAP18O00422 153 aaKnown RBP12.21□□□□□ -0.45
CLK3-224ENST00000568605 PLPP1O14494 284 aa12.21□□□□□ -0.45
CLK3-224ENST00000568605 CRCPO75575 148 aa12.21□□□□□ -0.45
CLK3-224ENST00000568605 OR4F21O95013 312 aa12.21□□□□□ -0.45
CLK3-224ENST00000568605 HSD3B1P14060 373 aa12.21□□□□□ -0.45
CLK3-224ENST00000568605 TSPAN8P19075 237 aa12.21□□□□□ -0.45
CLK3-224ENST00000568605 HSD3B2P26439 372 aa12.21□□□□□ -0.45
CLK3-224ENST00000568605 PPP2R1BP30154 601 aa12.21□□□□□ -0.45
CLK3-224ENST00000568605 TLX1P31314 330 aaPredicted RBP12.21□□□□□ -0.45
CLK3-224ENST00000568605 TNFRSF17Q02223 184 aa12.21□□□□□ -0.45
CLK3-224ENST00000568605 CSTF3Q12996 717 aaKnown RBP12.21□□□□□ -0.45
CLK3-224ENST00000568605 BTBD16Q32M84 506 aa12.21□□□□□ -0.45
CLK3-224ENST00000568605 SFT2D3Q587I9 215 aa12.21□□□□□ -0.45
CLK3-224ENST00000568605 CRB2Q5IJ48 1285 aa12.21□□□□□ -0.45
CLK3-224ENST00000568605 CEP85LQ5SZL2 805 aa12.21□□□□□ -0.45
CLK3-224ENST00000568605 PLAG1Q6DJT9 500 aa12.21□□□□□ -0.45
CLK3-224ENST00000568605 PAPD4Q6PIY7 484 aaKnown RBP12.21□□□□□ -0.45
CLK3-224ENST00000568605 FRMD7Q6ZUT3 714 aa12.21□□□□□ -0.45
CLK3-224ENST00000568605 RPS27LQ71UM5 84 aaKnown RBP12.21□□□□□ -0.45
CLK3-224ENST00000568605 PRICKLE2Q7Z3G6 844 aa12.21□□□□□ -0.45
CLK3-224ENST00000568605 CDYL2Q8N8U2 506 aa12.21□□□□□ -0.45
CLK3-224ENST00000568605 BANPQ8N9N5 519 aa12.21□□□□□ -0.45
CLK3-224ENST00000568605 FAM47BQ8NA70 645 aa12.21□□□□□ -0.45
CLK3-224ENST00000568605 TSLPQ969D9 159 aa12.21□□□□□ -0.45
CLK3-224ENST00000568605 CENPHQ9H3R5 247 aa12.21□□□□□ -0.45
CLK3-224ENST00000568605 WDR41Q9HAD4 459 aa12.21□□□□□ -0.45
CLK3-224ENST00000568605 OXSMQ9NWU1 459 aa12.21□□□□□ -0.45
CLK3-224ENST00000568605 TEKT2Q9UIF3 430 aa12.21□□□□□ -0.45
CLK3-224ENST00000568605 PLLPQ9Y342 182 aa12.21□□□□□ -0.45
CLK3-224ENST00000568605 CFAP46Q8IYW2 2715 aa12.21□□□□□ -0.46
CLK3-224ENST00000568605 TCRBV16S1A1N1A0A5B0 115 aa12.2□□□□□ -0.46
CLK3-224ENST00000568605 GOLGA6L10A6NI86 522 aa12.2□□□□□ -0.46
CLK3-224ENST00000568605 RTCAO00442 366 aaKnown RBP12.2□□□□□ -0.46
CLK3-224ENST00000568605 ESRRBO95718 433 aa12.2□□□□□ -0.46
CLK3-224ENST00000568605 PRR35P0CG20 571 aa12.2□□□□□ -0.46
CLK3-224ENST00000568605 NR1D1P20393 614 aa12.2□□□□□ -0.46
CLK3-224ENST00000568605 MAOAP21397 527 aa12.2□□□□□ -0.46
CLK3-224ENST00000568605 CPN2P22792 545 aa12.2□□□□□ -0.46
CLK3-224ENST00000568605 TAS2R50P59544 299 aa12.2□□□□□ -0.46
CLK3-224ENST00000568605 RUNX2Q13950 521 aa12.2□□□□□ -0.46
CLK3-224ENST00000568605 PCLAFQ15004 111 aa12.2□□□□□ -0.46
CLK3-224ENST00000568605 TERF2Q15554 542 aa12.2□□□□□ -0.46
CLK3-224ENST00000568605 ISLR2Q6UXK2 745 aa12.2□□□□□ -0.46
CLK3-224ENST00000568605 LRIG3Q6UXM1 1119 aa12.2□□□□□ -0.46
CLK3-224ENST00000568605 ZNF793Q6ZN11 406 aa12.2□□□□□ -0.46
CLK3-224ENST00000568605 ATG14Q6ZNE5 492 aa12.2□□□□□ -0.46
CLK3-224ENST00000568605 ZNF605Q86T29 641 aa12.2□□□□□ -0.46
CLK3-224ENST00000568605 PTRH1Q86Y79 214 aaKnown RBP12.2□□□□□ -0.46
CLK3-224ENST00000568605 SCUBE1Q8IWY4 988 aa12.2□□□□□ -0.46
CLK3-224ENST00000568605 RNF175Q8N4F7 328 aa12.2□□□□□ -0.46
CLK3-224ENST00000568605 ZADH2Q8N4Q0 377 aa12.2□□□□□ -0.46
CLK3-224ENST00000568605 METTL6Q8TCB7 284 aa12.2□□□□□ -0.46
CLK3-224ENST00000568605 AGAP11Q8TF27 550 aa12.2□□□□□ -0.46
CLK3-224ENST00000568605 MTFMTQ96DP5 389 aaKnown RBP12.2□□□□□ -0.46
CLK3-224ENST00000568605 ZIM3Q96PE6 472 aa12.2□□□□□ -0.46
CLK3-224ENST00000568605 FAM111AQ96PZ2 611 aa12.2□□□□□ -0.46
CLK3-224ENST00000568605 TRMOQ9BU70 441 aa12.2□□□□□ -0.46
CLK3-224ENST00000568605 GSTO2Q9H4Y5 243 aa12.2□□□□□ -0.46
CLK3-224ENST00000568605 ZNF552Q9H707 407 aaPredicted RBP12.2□□□□□ -0.46
CLK3-224ENST00000568605 MID1IP1Q9NPA3 183 aa12.2□□□□□ -0.46
CLK3-224ENST00000568605 ADAM29Q9UKF5 820 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms