RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 CATSPER1Q8NEC5 780 aa6.72□□□□□ -1.33
SMG1-215ENST00000568239 ZFP90Q8TF47 636 aa6.72□□□□□ -1.33
SMG1-215ENST00000568239 MTERF3Q96E29 417 aa6.72□□□□□ -1.33
SMG1-215ENST00000568239 DUS3LQ96G46 650 aaKnown RBP6.72□□□□□ -1.33
SMG1-215ENST00000568239 MAGED4Q96JG8 741 aa6.72□□□□□ -1.33
SMG1-215ENST00000568239 TRAPPC9Q96Q05 1148 aa6.72□□□□□ -1.33
SMG1-215ENST00000568239 SLC38A3Q99624 504 aa6.72□□□□□ -1.33
SMG1-215ENST00000568239 FAIM2Q9BWQ8 316 aa6.72□□□□□ -1.33
SMG1-215ENST00000568239 UGT2B28Q9BY64 529 aa6.72□□□□□ -1.33
SMG1-215ENST00000568239 GORASP2Q9H8Y8 452 aa6.72□□□□□ -1.33
SMG1-215ENST00000568239 IL21RQ9HBE5 538 aa6.72□□□□□ -1.33
SMG1-215ENST00000568239 UTS2RQ9UKP6 389 aa6.72□□□□□ -1.33
SMG1-215ENST00000568239 ATG4BQ9Y4P1 393 aa6.72□□□□□ -1.33
SMG1-215ENST00000568239 SNX11Q9Y5W9 270 aa6.72□□□□□ -1.33
SMG1-215ENST00000568239 LOC105369274A0A096LPK9 316 aa6.71□□□□□ -1.34
SMG1-215ENST00000568239 A0A0A6YYD5 115 aa6.71□□□□□ -1.34
SMG1-215ENST00000568239 LOC102723532A0A0G2JNH3 316 aa6.71□□□□□ -1.34
SMG1-215ENST00000568239 C1orf226A1L170 272 aa6.71□□□□□ -1.34
SMG1-215ENST00000568239 K7ESF4 209 aa6.71□□□□□ -1.34
SMG1-215ENST00000568239 GNGT2O14610 69 aa6.71□□□□□ -1.34
SMG1-215ENST00000568239 BCAT2O15382 392 aaPredicted RBP6.71□□□□□ -1.34
SMG1-215ENST00000568239 AQP9O43315 295 aa6.71□□□□□ -1.34
SMG1-215ENST00000568239 TPD52L2O43399 206 aaKnown RBP6.71□□□□□ -1.34
SMG1-215ENST00000568239 FKBP9O95302 570 aa6.71□□□□□ -1.34
SMG1-215ENST00000568239 ZNF888P0CJ79 500 aaPredicted RBP6.71□□□□□ -1.34
SMG1-215ENST00000568239 C8orf89P0DMQ9 161 aa6.71□□□□□ -1.34
SMG1-215ENST00000568239 ALPPL2P10696 532 aa6.71□□□□□ -1.34
SMG1-215ENST00000568239 ETFAP13804 333 aa6.71□□□□□ -1.34
SMG1-215ENST00000568239 GPX2P18283 190 aa6.71□□□□□ -1.34
SMG1-215ENST00000568239 CDH3P22223 829 aa6.71□□□□□ -1.34
SMG1-215ENST00000568239 RPS9P46781 194 aaKnown RBP6.71□□□□□ -1.34
SMG1-215ENST00000568239 LSSP48449 732 aa6.71□□□□□ -1.34
SMG1-215ENST00000568239 HNRNPKP61978 463 aaKnown RBP eCLIP6.71□□□□□ -1.34
SMG1-215ENST00000568239 TGM3Q08188 693 aa6.71□□□□□ -1.34
SMG1-215ENST00000568239 LRRC74AQ0VAA2 488 aa6.71□□□□□ -1.34
SMG1-215ENST00000568239 FXNQ16595 210 aa6.71□□□□□ -1.34
SMG1-215ENST00000568239 SLC5A12Q1EHB4 618 aa6.71□□□□□ -1.34
SMG1-215ENST00000568239 DEFB134Q4QY38 66 aa6.71□□□□□ -1.34
SMG1-215ENST00000568239 COX20Q5RI15 118 aa6.71□□□□□ -1.34
SMG1-215ENST00000568239 FCRL6Q6DN72 434 aa6.71□□□□□ -1.34
SMG1-215ENST00000568239 FRMPD2BQ6IN97 320 aa6.71□□□□□ -1.34
SMG1-215ENST00000568239 FKBP9P1Q75LS8 142 aa6.71□□□□□ -1.34
SMG1-215ENST00000568239 VN1R4Q7Z5H5 301 aa6.71□□□□□ -1.34
SMG1-215ENST00000568239 CALHM3Q86XJ0 350 aa6.71□□□□□ -1.34
SMG1-215ENST00000568239 RNF130Q86XS8 419 aa6.71□□□□□ -1.34
SMG1-215ENST00000568239 SLC44A2Q8IWA5 706 aaPredicted RBP6.71□□□□□ -1.34
SMG1-215ENST00000568239 OR4N4Q8N0Y3 316 aa6.71□□□□□ -1.34
SMG1-215ENST00000568239 ARL14Q8N4G2 192 aa6.71□□□□□ -1.34
SMG1-215ENST00000568239 FLVCR1-AS1Q8TAF5 88 aa6.71□□□□□ -1.34
SMG1-215ENST00000568239 ZFPM2Q8WW38 1151 aa6.71□□□□□ -1.34
SMG1-215ENST00000568239 SLC47A1Q96FL8 570 aa6.71□□□□□ -1.34
SMG1-215ENST00000568239 CCDC3Q9BQI4 270 aa6.71□□□□□ -1.34
SMG1-215ENST00000568239 NLNQ9BYT8 704 aa6.71□□□□□ -1.34
SMG1-215ENST00000568239 PRDM7Q9NQW5 492 aa6.71□□□□□ -1.34
SMG1-215ENST00000568239 STARD5Q9NSY2 213 aa6.71□□□□□ -1.34
SMG1-215ENST00000568239 EVA1BQ9NVM1 165 aa6.71□□□□□ -1.34
SMG1-215ENST00000568239 ADAM29Q9UKF5 820 aa6.71□□□□□ -1.34
SMG1-215ENST00000568239 ENTPD2Q9Y5L3 495 aa6.71□□□□□ -1.34
SMG1-215ENST00000568239 DMDP11532 3685 aa6.71□□□□□ -1.34
SMG1-215ENST00000568239 CCDC88CQ9P219 2028 aa6.71□□□□□ -1.34
SMG1-215ENST00000568239 OR2A25A4D2G3 310 aa6.71□□□□□ -1.34
SMG1-215ENST00000568239 OR5K3A6NET4 321 aa6.71□□□□□ -1.34
SMG1-215ENST00000568239 ZNF860A6NHJ4 632 aa6.71□□□□□ -1.34
SMG1-215ENST00000568239 PEX1O43933 1283 aa6.71□□□□□ -1.34
SMG1-215ENST00000568239 LDLRP01130 860 aa6.71□□□□□ -1.34
SMG1-215ENST00000568239 RAP2AP10114 183 aa6.71□□□□□ -1.34
SMG1-215ENST00000568239 FCGR1AP12314 374 aa6.71□□□□□ -1.34
SMG1-215ENST00000568239 ZNF23P17027 643 aa6.71□□□□□ -1.34
SMG1-215ENST00000568239 PPIBP23284 216 aaKnown RBP6.71□□□□□ -1.34
SMG1-215ENST00000568239 GSTM2P28161 218 aa6.71□□□□□ -1.34
SMG1-215ENST00000568239 ALDH4A1P30038 563 aa6.71□□□□□ -1.34
SMG1-215ENST00000568239 FNTBP49356 437 aa6.71□□□□□ -1.34
SMG1-215ENST00000568239 DHPSP49366 369 aaPredicted RBP6.71□□□□□ -1.34
SMG1-215ENST00000568239 GZMMP51124 257 aa6.71□□□□□ -1.34
SMG1-215ENST00000568239 RPS26P62854 115 aaKnown RBP6.71□□□□□ -1.34
SMG1-215ENST00000568239 FOLH1Q04609 750 aa6.71□□□□□ -1.34
SMG1-215ENST00000568239 VAC14Q08AM6 782 aa6.71□□□□□ -1.34
SMG1-215ENST00000568239 SRSF5Q13243 272 aaKnown RBP6.71□□□□□ -1.34
SMG1-215ENST00000568239 MED21Q13503 144 aa6.71□□□□□ -1.34
SMG1-215ENST00000568239 DEFB110Q30KQ9 67 aa6.71□□□□□ -1.34
SMG1-215ENST00000568239 C18orf63Q68DL7 685 aa6.71□□□□□ -1.34
SMG1-215ENST00000568239 TMEM126BQ8IUX1 230 aa6.71□□□□□ -1.34
SMG1-215ENST00000568239 GOLM1Q8NBJ4 401 aa6.71□□□□□ -1.34
SMG1-215ENST00000568239 TPD52L3Q96J77 140 aa6.71□□□□□ -1.34
SMG1-215ENST00000568239 PHF12Q96QT6 1004 aa6.71□□□□□ -1.34
SMG1-215ENST00000568239 OR2A5Q96R48 311 aa6.71□□□□□ -1.34
SMG1-215ENST00000568239 BBS4Q96RK4 519 aa6.71□□□□□ -1.34
SMG1-215ENST00000568239 SLC29A1Q99808 456 aa6.71□□□□□ -1.34
SMG1-215ENST00000568239 ZFYVE21Q9BQ24 234 aa6.71□□□□□ -1.34
SMG1-215ENST00000568239 CD320Q9NPF0 282 aa6.71□□□□□ -1.34
SMG1-215ENST00000568239 SLAMF7Q9NQ25 335 aa6.71□□□□□ -1.34
SMG1-215ENST00000568239 IRAK4Q9NWZ3 460 aa6.71□□□□□ -1.34
SMG1-215ENST00000568239 UCKL1Q9NWZ5 548 aa6.71□□□□□ -1.34
SMG1-215ENST00000568239 KLHL3Q9UH77 587 aa6.71□□□□□ -1.34
SMG1-215ENST00000568239 OAZ3Q9UMX2 235 aa6.71□□□□□ -1.34
SMG1-215ENST00000568239 CORO2BQ9UQ03 480 aa6.71□□□□□ -1.34
SMG1-215ENST00000568239 EML5Q05BV3 1969 aa6.71□□□□□ -1.34
SMG1-215ENST00000568239 CACNA1EQ15878 2313 aa6.71□□□□□ -1.34
SMG1-215ENST00000568239 A0A0J9YY10 115 aa6.7□□□□□ -1.34
SMG1-215ENST00000568239 A0A1B0GVT2 93 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms