RNA–Protein interactions for RNA: ENST00000565481.5

KIFC3-222, Transcript of kinesin family member C3, human

TSL 5

Gene KIFC3, Length 788 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KIFC3-222	ENST00000565481	RHEBL1	Q8TAI7	183 aa		10.87	□□□□□ -0.67
KIFC3-222	ENST00000565481	ZNF473	Q8WTR7	871 aa	Known RBP	10.87	□□□□□ -0.67
KIFC3-222	ENST00000565481	ITLN2	Q8WWU7	325 aa	Predicted RBP	10.87	□□□□□ -0.67
KIFC3-222	ENST00000565481	GPR137	Q96N19	417 aa		10.87	□□□□□ -0.67
KIFC3-222	ENST00000565481	KCNC2	Q96PR1	638 aa		10.87	□□□□□ -0.67
KIFC3-222	ENST00000565481	F2RL3	Q96RI0	385 aa		10.87	□□□□□ -0.67
KIFC3-222	ENST00000565481	CSF3R	Q99062	836 aa		10.87	□□□□□ -0.67
KIFC3-222	ENST00000565481	MS4A8	Q9BY19	250 aa		10.87	□□□□□ -0.67
KIFC3-222	ENST00000565481	DEFB126	Q9BYW3	111 aa		10.87	□□□□□ -0.67
KIFC3-222	ENST00000565481	LYRM4	Q9HD34	91 aa		10.87	□□□□□ -0.67
KIFC3-222	ENST00000565481	ADAP2	Q9NPF8	381 aa		10.87	□□□□□ -0.67
KIFC3-222	ENST00000565481	PRTFDC1	Q9NRG1	225 aa		10.87	□□□□□ -0.67
KIFC3-222	ENST00000565481	KCMF1	Q9P0J7	381 aa		10.87	□□□□□ -0.67
KIFC3-222	ENST00000565481	MRPS33	Q9Y291	106 aa	Known RBP	10.87	□□□□□ -0.67
KIFC3-222	ENST00000565481	PHF3	Q92576	2039 aa	Known RBP	10.86	□□□□□ -0.67
KIFC3-222	ENST00000565481	ESYT3	A0FGR9	886 aa		10.86	□□□□□ -0.67
KIFC3-222	ENST00000565481		A8MUA0	341 aa		10.86	□□□□□ -0.67
KIFC3-222	ENST00000565481		K7EPI3	171 aa		10.86	□□□□□ -0.67
KIFC3-222	ENST00000565481	UBXN8	O00124	270 aa		10.86	□□□□□ -0.67
KIFC3-222	ENST00000565481	FCHO1	O14526	889 aa		10.86	□□□□□ -0.67
KIFC3-222	ENST00000565481	CCNT2	O60583	730 aa	Known RBP	10.86	□□□□□ -0.67
KIFC3-222	ENST00000565481	SLC19A2	O60779	497 aa		10.86	□□□□□ -0.67
KIFC3-222	ENST00000565481	CTNS	O60931	367 aa		10.86	□□□□□ -0.67
KIFC3-222	ENST00000565481	MLYCD	O95822	493 aa		10.86	□□□□□ -0.67
KIFC3-222	ENST00000565481	PPP2R1B	P30154	601 aa		10.86	□□□□□ -0.67
KIFC3-222	ENST00000565481	SERPINB1	P30740	379 aa		10.86	□□□□□ -0.67
KIFC3-222	ENST00000565481	CYB561	P49447	251 aa		10.86	□□□□□ -0.67
KIFC3-222	ENST00000565481	CLCN2	P51788	898 aa		10.86	□□□□□ -0.67
KIFC3-222	ENST00000565481	ALDH6A1	Q02252	535 aa	Known RBP	10.86	□□□□□ -0.67
KIFC3-222	ENST00000565481	RBPJ	Q06330	500 aa		10.86	□□□□□ -0.67
KIFC3-222	ENST00000565481	TGM3	Q08188	693 aa		10.86	□□□□□ -0.67
KIFC3-222	ENST00000565481	SLC13A2	Q13183	592 aa		10.86	□□□□□ -0.67
KIFC3-222	ENST00000565481	RCN2	Q14257	317 aa		10.86	□□□□□ -0.67
KIFC3-222	ENST00000565481	HIST2H2AC	Q16777	129 aa	Predicted RBP	10.86	□□□□□ -0.67
KIFC3-222	ENST00000565481	HIST2H2AA3	Q6FI13	130 aa		10.86	□□□□□ -0.67
KIFC3-222	ENST00000565481	ZNF793	Q6ZN11	406 aa		10.86	□□□□□ -0.67
KIFC3-222	ENST00000565481	RAPH1	Q70E73	1250 aa		10.86	□□□□□ -0.67
KIFC3-222	ENST00000565481	TBC1D1	Q86TI0	1168 aa	Predicted RBP	10.86	□□□□□ -0.67
KIFC3-222	ENST00000565481	RELL1	Q8IUW5	271 aa		10.86	□□□□□ -0.67
KIFC3-222	ENST00000565481	CHERP	Q8IWX8	916 aa	Known RBP	10.86	□□□□□ -0.67
KIFC3-222	ENST00000565481	FAM47B	Q8NA70	645 aa		10.86	□□□□□ -0.67
KIFC3-222	ENST00000565481	FAM98A	Q8NCA5	519 aa	Known RBP	10.86	□□□□□ -0.67
KIFC3-222	ENST00000565481	SRFBP1	Q8NEF9	429 aa	Known RBP	10.86	□□□□□ -0.67
KIFC3-222	ENST00000565481	EXT2	Q93063	718 aa		10.86	□□□□□ -0.67
KIFC3-222	ENST00000565481	UBE2E3	Q969T4	207 aa		10.86	□□□□□ -0.67
KIFC3-222	ENST00000565481	VMP1	Q96GC9	406 aa		10.86	□□□□□ -0.67
KIFC3-222	ENST00000565481	CCDC120	Q96HB5	630 aa		10.86	□□□□□ -0.67
KIFC3-222	ENST00000565481	TBCD	Q9BTW9	1192 aa		10.86	□□□□□ -0.67
KIFC3-222	ENST00000565481	ROGDI	Q9GZN7	287 aa		10.86	□□□□□ -0.67
KIFC3-222	ENST00000565481	ENTPD4	Q9Y227	616 aa		10.86	□□□□□ -0.67
KIFC3-222	ENST00000565481	ACOT9	Q9Y305	439 aa		10.86	□□□□□ -0.67
KIFC3-222	ENST00000565481	TSC22D4	Q9Y3Q8	395 aa		10.86	□□□□□ -0.67
KIFC3-222	ENST00000565481	PDZD2	O15018	2839 aa		10.86	□□□□□ -0.67
KIFC3-222	ENST00000565481		A0A087X1B8	175 aa		10.85	□□□□□ -0.67
KIFC3-222	ENST00000565481	TRGV8	A0A0C4DH27	118 aa		10.85	□□□□□ -0.67
KIFC3-222	ENST00000565481	TRBV11-1	A0A0K0K1C0	115 aa		10.85	□□□□□ -0.67
KIFC3-222	ENST00000565481	TMEM200C	A6NKL6	621 aa		10.85	□□□□□ -0.67
KIFC3-222	ENST00000565481	SUPT3H	B4E1H0	165 aa		10.85	□□□□□ -0.67
KIFC3-222	ENST00000565481	KLK8	O60259	260 aa		10.85	□□□□□ -0.67
KIFC3-222	ENST00000565481	SUPT3H	O75486	399 aa		10.85	□□□□□ -0.67
KIFC3-222	ENST00000565481	C2	P06681	752 aa		10.85	□□□□□ -0.67
KIFC3-222	ENST00000565481	ATP5A1	P25705	553 aa	Known RBP	10.85	□□□□□ -0.67
KIFC3-222	ENST00000565481	MSH2	P43246	934 aa		10.85	□□□□□ -0.67
KIFC3-222	ENST00000565481	SLC7A5	Q01650	507 aa		10.85	□□□□□ -0.67
KIFC3-222	ENST00000565481	CKAP4	Q07065	602 aa	Known RBP	10.85	□□□□□ -0.67
KIFC3-222	ENST00000565481	ART3	Q13508	389 aa		10.85	□□□□□ -0.67
KIFC3-222	ENST00000565481	NAA30	Q147X3	362 aa	Predicted RBP	10.85	□□□□□ -0.67
KIFC3-222	ENST00000565481	ELAVL1	Q15717	326 aa	Known RBP	10.85	□□□□□ -0.67
KIFC3-222	ENST00000565481	TMEM35A	Q53FP2	167 aa		10.85	□□□□□ -0.67
KIFC3-222	ENST00000565481	RNFT1	Q5M7Z0	435 aa		10.85	□□□□□ -0.67
KIFC3-222	ENST00000565481	C8orf74	Q6P047	294 aa		10.85	□□□□□ -0.67
KIFC3-222	ENST00000565481	MTFR2	Q6P444	385 aa		10.85	□□□□□ -0.67
KIFC3-222	ENST00000565481	PNPLA5	Q7Z6Z6	429 aa	Predicted RBP	10.85	□□□□□ -0.67
KIFC3-222	ENST00000565481	TICAM1	Q8IUC6	712 aa		10.85	□□□□□ -0.67
KIFC3-222	ENST00000565481	ACOT4	Q8N9L9	421 aa		10.85	□□□□□ -0.67
KIFC3-222	ENST00000565481	POGLUT1	Q8NBL1	392 aa		10.85	□□□□□ -0.67
KIFC3-222	ENST00000565481	OR7G3	Q8NG95	312 aa		10.85	□□□□□ -0.67
KIFC3-222	ENST00000565481	KCTD4	Q8WVF5	259 aa		10.85	□□□□□ -0.67
KIFC3-222	ENST00000565481	NCLN	Q969V3	563 aa		10.85	□□□□□ -0.67
KIFC3-222	ENST00000565481	NXNL1	Q96CM4	212 aa		10.85	□□□□□ -0.67
KIFC3-222	ENST00000565481	GPR78	Q96P69	363 aa		10.85	□□□□□ -0.67
KIFC3-222	ENST00000565481	LRRC1	Q9BTT6	524 aa		10.85	□□□□□ -0.67
KIFC3-222	ENST00000565481	FUT8	Q9BYC5	575 aa		10.85	□□□□□ -0.67
KIFC3-222	ENST00000565481	ACSS3	Q9H6R3	686 aa		10.85	□□□□□ -0.67
KIFC3-222	ENST00000565481	COPS7B	Q9H9Q2	264 aa	Predicted RBP	10.85	□□□□□ -0.67
KIFC3-222	ENST00000565481	SNX15	Q9NRS6	342 aa		10.85	□□□□□ -0.67
KIFC3-222	ENST00000565481	PNO1	Q9NRX1	252 aa	Known RBP	10.85	□□□□□ -0.67
KIFC3-222	ENST00000565481	OPTC	Q9UBM4	332 aa		10.85	□□□□□ -0.67
KIFC3-222	ENST00000565481	SUCO	Q9UBS9	1254 aa	Known RBP	10.85	□□□□□ -0.67
KIFC3-222	ENST00000565481	VTI1B	Q9UEU0	232 aa		10.85	□□□□□ -0.67
KIFC3-222	ENST00000565481	KLF2	Q9Y5W3	355 aa	Predicted RBP	10.85	□□□□□ -0.67
KIFC3-222	ENST00000565481	EXPH5	Q8NEV8	1989 aa		10.85	□□□□□ -0.67
KIFC3-222	ENST00000565481	OTOG	Q6ZRI0	2925 aa		10.85	□□□□□ -0.67
KIFC3-222	ENST00000565481	POLQ	O75417	2590 aa		10.84	□□□□□ -0.67
KIFC3-222	ENST00000565481	SYCE1L	A8MT33	242 aa		10.84	□□□□□ -0.67
KIFC3-222	ENST00000565481	NPIPA5	E9PKD4	350 aa		10.84	□□□□□ -0.67
KIFC3-222	ENST00000565481	CCL21	O00585	134 aa		10.84	□□□□□ -0.67
KIFC3-222	ENST00000565481	ASNA1	O43681	348 aa		10.84	□□□□□ -0.67
KIFC3-222	ENST00000565481	PRKN	O60260	465 aa	Predicted RBP	10.84	□□□□□ -0.67
KIFC3-222	ENST00000565481	ITGA10	O75578	1167 aa		10.84	□□□□□ -0.67

Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms