RNA–Protein interactions for RNA: ENST00000565003.5

CMTM3-209, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-209ENST00000565003 MROH9Q5TGP6 573 aa9.36□□□□□ -0.91
CMTM3-209ENST00000565003 SLC25A25Q6KCM7 469 aa9.36□□□□□ -0.91
CMTM3-209ENST00000565003 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.36□□□□□ -0.91
CMTM3-209ENST00000565003 SIAH3Q8IW03 269 aa9.36□□□□□ -0.91
CMTM3-209ENST00000565003 ZNF595Q8IYB9 648 aa9.36□□□□□ -0.91
CMTM3-209ENST00000565003 LAS2Q8IYD9 372 aa9.36□□□□□ -0.91
CMTM3-209ENST00000565003 CPSF7Q8N684 471 aaKnown RBP9.36□□□□□ -0.91
CMTM3-209ENST00000565003 HORMAD2Q8N7B1 307 aa9.36□□□□□ -0.91
CMTM3-209ENST00000565003 B3GNT7Q8NFL0 401 aa9.36□□□□□ -0.91
CMTM3-209ENST00000565003 ADAMTS18Q8TE60 1221 aa9.36□□□□□ -0.91
CMTM3-209ENST00000565003 ZNF473Q8WTR7 871 aaKnown RBP9.36□□□□□ -0.91
CMTM3-209ENST00000565003 THAP3Q8WTV1 239 aaPredicted RBP9.36□□□□□ -0.91
CMTM3-209ENST00000565003 NCLNQ969V3 563 aa9.36□□□□□ -0.91
CMTM3-209ENST00000565003 MRRFQ96E11 262 aaKnown RBP9.36□□□□□ -0.91
CMTM3-209ENST00000565003 C16orf45Q96MC5 204 aaPredicted RBP9.36□□□□□ -0.91
CMTM3-209ENST00000565003 GPR137Q96N19 417 aa9.36□□□□□ -0.91
CMTM3-209ENST00000565003 MS4A8Q9BY19 250 aa9.36□□□□□ -0.91
CMTM3-209ENST00000565003 DEFB126Q9BYW3 111 aa9.36□□□□□ -0.91
CMTM3-209ENST00000565003 COPS7BQ9H9Q2 264 aaPredicted RBP9.36□□□□□ -0.91
CMTM3-209ENST00000565003 SNX15Q9NRS6 342 aa9.36□□□□□ -0.91
CMTM3-209ENST00000565003 KCMF1Q9P0J7 381 aa9.36□□□□□ -0.91
CMTM3-209ENST00000565003 OPTCQ9UBM4 332 aa9.36□□□□□ -0.91
CMTM3-209ENST00000565003 NPIPA1Q9UND3 350 aa9.36□□□□□ -0.91
CMTM3-209ENST00000565003 PPIEQ9UNP9 301 aaKnown RBP9.36□□□□□ -0.91
CMTM3-209ENST00000565003 LRRC14BA6NHZ5 514 aa9.35□□□□□ -0.91
CMTM3-209ENST00000565003 CCL21O00585 134 aa9.35□□□□□ -0.91
CMTM3-209ENST00000565003 FCHO1O14526 889 aa9.35□□□□□ -0.91
CMTM3-209ENST00000565003 ZNHIT1O43257 154 aa9.35□□□□□ -0.91
CMTM3-209ENST00000565003 SLC19A2O60779 497 aa9.35□□□□□ -0.91
CMTM3-209ENST00000565003 SH3BGRLO75368 114 aa9.35□□□□□ -0.91
CMTM3-209ENST00000565003 ITGA10O75578 1167 aa9.35□□□□□ -0.91
CMTM3-209ENST00000565003 SCELO95171 688 aa9.35□□□□□ -0.91
CMTM3-209ENST00000565003 TGFB1P01137 390 aa9.35□□□□□ -0.91
CMTM3-209ENST00000565003 ALDOAP04075 364 aaKnown RBP9.35□□□□□ -0.91
CMTM3-209ENST00000565003 C2P06681 752 aa9.35□□□□□ -0.91
CMTM3-209ENST00000565003 PCNAP12004 261 aa9.35□□□□□ -0.91
CMTM3-209ENST00000565003 PCDH1Q08174 1060 aa9.35□□□□□ -0.91
CMTM3-209ENST00000565003 NAA30Q147X3 362 aaPredicted RBP9.35□□□□□ -0.91
CMTM3-209ENST00000565003 C3AR1Q16581 482 aa9.35□□□□□ -0.91
CMTM3-209ENST00000565003 HIST2H2ACQ16777 129 aaPredicted RBP9.35□□□□□ -0.91
CMTM3-209ENST00000565003 RNFT1Q5M7Z0 435 aa9.35□□□□□ -0.91
CMTM3-209ENST00000565003 HIST2H2AA3Q6FI13 130 aa9.35□□□□□ -0.91
CMTM3-209ENST00000565003 MED27Q6P2C8 311 aa9.35□□□□□ -0.91
CMTM3-209ENST00000565003 C16orf47Q6ZP98 133 aaPredicted RBP9.35□□□□□ -0.91
CMTM3-209ENST00000565003 RNF175Q8N4F7 328 aa9.35□□□□□ -0.91
CMTM3-209ENST00000565003 ACOT4Q8N9L9 421 aa9.35□□□□□ -0.91
CMTM3-209ENST00000565003 OR7G3Q8NG95 312 aa9.35□□□□□ -0.91
CMTM3-209ENST00000565003 ITLN2Q8WWU7 325 aaPredicted RBP9.35□□□□□ -0.91
CMTM3-209ENST00000565003 VMP1Q96GC9 406 aa9.35□□□□□ -0.91
CMTM3-209ENST00000565003 CCDC120Q96HB5 630 aa9.35□□□□□ -0.91
CMTM3-209ENST00000565003 KCNC2Q96PR1 638 aa9.35□□□□□ -0.91
CMTM3-209ENST00000565003 SORBS1Q9BX66 1292 aaKnown RBP9.35□□□□□ -0.91
CMTM3-209ENST00000565003 LYRM4Q9HD34 91 aa9.35□□□□□ -0.91
CMTM3-209ENST00000565003 ADAP2Q9NPF8 381 aa9.35□□□□□ -0.91
CMTM3-209ENST00000565003 NINJ2Q9NZG7 142 aa9.35□□□□□ -0.91
CMTM3-209ENST00000565003 TINAGQ9UJW2 476 aa9.35□□□□□ -0.91
CMTM3-209ENST00000565003 FBXW2Q9UKT8 454 aa9.35□□□□□ -0.91
CMTM3-209ENST00000565003 MRPS33Q9Y291 106 aaKnown RBP9.35□□□□□ -0.91
CMTM3-209ENST00000565003 ACOT9Q9Y305 439 aa9.35□□□□□ -0.91
CMTM3-209ENST00000565003 A0A087X1B8 175 aa9.34□□□□□ -0.91
CMTM3-209ENST00000565003 A0A096LPK6 155 aa9.34□□□□□ -0.91
CMTM3-209ENST00000565003 TMEM200CA6NKL6 621 aa9.34□□□□□ -0.91
CMTM3-209ENST00000565003 SAP18O00422 153 aaKnown RBP9.34□□□□□ -0.91
CMTM3-209ENST00000565003 CDK2AP1O14519 115 aa9.34□□□□□ -0.91
CMTM3-209ENST00000565003 CTNSO60931 367 aa9.34□□□□□ -0.91
CMTM3-209ENST00000565003 LDB3O75112 727 aa9.34□□□□□ -0.91
CMTM3-209ENST00000565003 URI1O94763 535 aaPredicted RBP9.34□□□□□ -0.91
CMTM3-209ENST00000565003 IFNA16P05015 189 aa9.34□□□□□ -0.91
CMTM3-209ENST00000565003 ZNF24P17028 368 aa9.34□□□□□ -0.91
CMTM3-209ENST00000565003 HIST1H1TP22492 207 aaPredicted RBP9.34□□□□□ -0.91
CMTM3-209ENST00000565003 ATP5A1P25705 553 aaKnown RBP9.34□□□□□ -0.91
CMTM3-209ENST00000565003 HSF1Q00613 529 aa9.34□□□□□ -0.91
CMTM3-209ENST00000565003 TGM3Q08188 693 aa9.34□□□□□ -0.91
CMTM3-209ENST00000565003 DDX39BQ13838 428 aaKnown RBP9.34□□□□□ -0.91
CMTM3-209ENST00000565003 SETDB1Q15047 1291 aa9.34□□□□□ -0.91
CMTM3-209ENST00000565003 ELAVL1Q15717 326 aaKnown RBP9.34□□□□□ -0.91
CMTM3-209ENST00000565003 UAP1Q16222 522 aaPredicted RBP9.34□□□□□ -0.91
CMTM3-209ENST00000565003 PFKFB4Q16877 469 aa9.34□□□□□ -0.91
CMTM3-209ENST00000565003 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.34□□□□□ -0.91
CMTM3-209ENST00000565003 TMEM35AQ53FP2 167 aa9.34□□□□□ -0.91
CMTM3-209ENST00000565003 KRTCAP3Q53RY4 240 aa9.34□□□□□ -0.91
CMTM3-209ENST00000565003 KHDRBS2Q5VWX1 349 aaKnown RBP9.34□□□□□ -0.91
CMTM3-209ENST00000565003 GRHL2Q6ISB3 625 aa9.34□□□□□ -0.91
CMTM3-209ENST00000565003 CCDC91Q7Z6B0 441 aa9.34□□□□□ -0.91
CMTM3-209ENST00000565003 CHERPQ8IWX8 916 aaKnown RBP9.34□□□□□ -0.91
CMTM3-209ENST00000565003 TEX9Q8N6V9 391 aa9.34□□□□□ -0.91
CMTM3-209ENST00000565003 ZNF321PQ8N8H1 164 aa9.34□□□□□ -0.91
CMTM3-209ENST00000565003 NOA1Q8NC60 698 aaKnown RBP9.34□□□□□ -0.91
CMTM3-209ENST00000565003 FAM98AQ8NCA5 519 aaKnown RBP9.34□□□□□ -0.91
CMTM3-209ENST00000565003 HUS1BQ8NHY5 278 aa9.34□□□□□ -0.91
CMTM3-209ENST00000565003 RHEBL1Q8TAI7 183 aa9.34□□□□□ -0.91
CMTM3-209ENST00000565003 PTPMT1Q8WUK0 201 aaPredicted RBP9.34□□□□□ -0.91
CMTM3-209ENST00000565003 SREK1Q8WXA9 508 aaKnown RBP9.34□□□□□ -0.91
CMTM3-209ENST00000565003 UBE2E3Q969T4 207 aa9.34□□□□□ -0.91
CMTM3-209ENST00000565003 TMEM125Q96AQ2 219 aa9.34□□□□□ -0.91
CMTM3-209ENST00000565003 MAGED4Q96JG8 741 aa9.34□□□□□ -0.91
CMTM3-209ENST00000565003 GPR78Q96P69 363 aa9.34□□□□□ -0.91
CMTM3-209ENST00000565003 MAPKAP1Q9BPZ7 522 aa9.34□□□□□ -0.91
CMTM3-209ENST00000565003 TBCDQ9BTW9 1192 aa9.34□□□□□ -0.91
CMTM3-209ENST00000565003 ALOXE3Q9BYJ1 711 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms