RNA–Protein interactions for RNA: ENST00000564774.5

TAF1C-212, Transcript of TATA-box binding protein associated factor, RNA polymerase I subunit C, human

TSL 2

Gene TAF1C, Length 4,637 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TAF1C-212	ENST00000564774	RIMKLB	Q9ULI2	386 aa		13.2	□□□□□ -0.3
TAF1C-212	ENST00000564774	CLEC3A	O75596	197 aa		13.2	□□□□□ -0.3
TAF1C-212	ENST00000564774	HSD3B1	P14060	373 aa		13.2	□□□□□ -0.3
TAF1C-212	ENST00000564774	HSD3B2	P26439	372 aa		13.2	□□□□□ -0.3
TAF1C-212	ENST00000564774	TRAP1	Q12931	704 aa	Known RBP	13.2	□□□□□ -0.3
TAF1C-212	ENST00000564774	DAG1	Q14118	895 aa		13.2	□□□□□ -0.3
TAF1C-212	ENST00000564774	RNASE12	Q5GAN4	147 aa	Known RBP	13.2	□□□□□ -0.3
TAF1C-212	ENST00000564774	NANOGP8	Q6NSW7	305 aa		13.2	□□□□□ -0.3
TAF1C-212	ENST00000564774	OR5P2	Q8WZ92	322 aa		13.2	□□□□□ -0.3
TAF1C-212	ENST00000564774	MYRFL	Q96LU7	910 aa		13.2	□□□□□ -0.3
TAF1C-212	ENST00000564774	ZSWIM3	Q96MP5	696 aa		13.2	□□□□□ -0.3
TAF1C-212	ENST00000564774	NANOG	Q9H9S0	305 aa		13.2	□□□□□ -0.3
TAF1C-212	ENST00000564774	PADI2	Q9Y2J8	665 aa		13.2	□□□□□ -0.3
TAF1C-212	ENST00000564774	ASNA1	O43681	348 aa		13.19	□□□□□ -0.3
TAF1C-212	ENST00000564774	DBI	P07108	87 aa	Known RBP	13.19	□□□□□ -0.3
TAF1C-212	ENST00000564774	IFI30	P13284	250 aa		13.19	□□□□□ -0.3
TAF1C-212	ENST00000564774	C4BPB	P20851	252 aa		13.19	□□□□□ -0.3
TAF1C-212	ENST00000564774	PLCXD2	Q0VAA5	305 aa		13.19	□□□□□ -0.3
TAF1C-212	ENST00000564774	SLC5A9	Q2M3M2	681 aa		13.19	□□□□□ -0.3
TAF1C-212	ENST00000564774	TBC1D25	Q3MII6	688 aa		13.19	□□□□□ -0.3
TAF1C-212	ENST00000564774	ZNF551	Q7Z340	670 aa	Predicted RBP	13.19	□□□□□ -0.3
TAF1C-212	ENST00000564774	ZFAND4	Q86XD8	727 aa		13.19	□□□□□ -0.3
TAF1C-212	ENST00000564774	PROKR2	Q8NFJ6	384 aa		13.19	□□□□□ -0.3
TAF1C-212	ENST00000564774	AP3S1	Q92572	193 aa		13.19	□□□□□ -0.3
TAF1C-212	ENST00000564774	TRIB3	Q96RU7	358 aa		13.19	□□□□□ -0.3
TAF1C-212	ENST00000564774	MYH4	Q9Y623	1939 aa		13.19	□□□□□ -0.3
TAF1C-212	ENST00000564774		A0A075B6Q4	140 aa		13.19	□□□□□ -0.3
TAF1C-212	ENST00000564774	PRKACG	P22612	351 aa		13.19	□□□□□ -0.3
TAF1C-212	ENST00000564774	ITGA3	P26006	1051 aa		13.19	□□□□□ -0.3
TAF1C-212	ENST00000564774	DNAJA1	P31689	397 aa	Known RBP	13.19	□□□□□ -0.3
TAF1C-212	ENST00000564774	AQP4	P55087	323 aa		13.19	□□□□□ -0.3
TAF1C-212	ENST00000564774	PDCD4	Q53EL6	469 aa	Known RBP	13.19	□□□□□ -0.3
TAF1C-212	ENST00000564774	CYBRD1	Q53TN4	286 aa		13.19	□□□□□ -0.3
TAF1C-212	ENST00000564774	TMEM107	Q6UX40	140 aa		13.19	□□□□□ -0.3
TAF1C-212	ENST00000564774	OR7G3	Q8NG95	312 aa		13.19	□□□□□ -0.3
TAF1C-212	ENST00000564774	TMBIM1	Q969X1	311 aa		13.19	□□□□□ -0.3
TAF1C-212	ENST00000564774	COQ8B	Q96D53	544 aa		13.19	□□□□□ -0.3
TAF1C-212	ENST00000564774	MARK1	Q9P0L2	795 aa		13.19	□□□□□ -0.3
TAF1C-212	ENST00000564774	ACTR3B	Q9P1U1	418 aa		13.19	□□□□□ -0.3
TAF1C-212	ENST00000564774	DKKL1	Q9UK85	242 aa		13.19	□□□□□ -0.3
TAF1C-212	ENST00000564774	ACSL6	Q9UKU0	697 aa		13.19	□□□□□ -0.3
TAF1C-212	ENST00000564774	RIF1	Q5UIP0	2472 aa	Known RBP	13.19	□□□□□ -0.3
TAF1C-212	ENST00000564774	MYH7B	A7E2Y1	1941 aa		13.19	□□□□□ -0.3
TAF1C-212	ENST00000564774	EIF1AX	P47813	144 aa	Known RBP	13.19	□□□□□ -0.3
TAF1C-212	ENST00000564774	SGSH	P51688	502 aa		13.19	□□□□□ -0.3
TAF1C-212	ENST00000564774	RAB14	P61106	215 aa		13.19	□□□□□ -0.3
TAF1C-212	ENST00000564774	PRPF38B	Q5VTL8	546 aa	Known RBP	13.19	□□□□□ -0.3
TAF1C-212	ENST00000564774	SLC25A24	Q6NUK1	477 aa		13.19	□□□□□ -0.3
TAF1C-212	ENST00000564774	FIGNL1	Q6PIW4	674 aa		13.19	□□□□□ -0.3
TAF1C-212	ENST00000564774	LRRC25	Q8N386	305 aa	Predicted RBP	13.19	□□□□□ -0.3
TAF1C-212	ENST00000564774	POC5	Q8NA72	575 aa		13.19	□□□□□ -0.3
TAF1C-212	ENST00000564774	SPATA9	Q9BWV2	254 aa		13.19	□□□□□ -0.3
TAF1C-212	ENST00000564774	TMEM184C	Q9NVA4	438 aa		13.19	□□□□□ -0.3
TAF1C-212	ENST00000564774	NKIRAS2	Q9NYR9	191 aa		13.19	□□□□□ -0.3
TAF1C-212	ENST00000564774	EP300	Q09472	2414 aa	Predicted RBP	13.19	□□□□□ -0.3
TAF1C-212	ENST00000564774	RP1	P56715	2156 aa		13.19	□□□□□ -0.3
TAF1C-212	ENST00000564774	TBX10	O75333	385 aa		13.19	□□□□□ -0.3
TAF1C-212	ENST00000564774	RCBTB2	O95199	551 aa		13.19	□□□□□ -0.3
TAF1C-212	ENST00000564774	C9	P02748	559 aa		13.19	□□□□□ -0.3
TAF1C-212	ENST00000564774	HMGA1	P17096	107 aa	Known RBP	13.19	□□□□□ -0.3
TAF1C-212	ENST00000564774	PDHA2	P29803	388 aa		13.19	□□□□□ -0.3
TAF1C-212	ENST00000564774	TAB1	Q15750	504 aa		13.19	□□□□□ -0.3
TAF1C-212	ENST00000564774	TCTE1	Q5JU00	501 aa		13.19	□□□□□ -0.3
TAF1C-212	ENST00000564774	SLC35F1	Q5T1Q4	408 aa		13.19	□□□□□ -0.3
TAF1C-212	ENST00000564774	OR52E8	Q6IFG1	317 aa		13.19	□□□□□ -0.3
TAF1C-212	ENST00000564774	SDR16C5	Q8N3Y7	309 aa		13.19	□□□□□ -0.3
TAF1C-212	ENST00000564774	PRR11	Q96HE9	360 aa	Predicted RBP	13.19	□□□□□ -0.3
TAF1C-212	ENST00000564774	CD180	Q99467	661 aa		13.19	□□□□□ -0.3
TAF1C-212	ENST00000564774	MACROD1	Q9BQ69	325 aa		13.19	□□□□□ -0.3
TAF1C-212	ENST00000564774	POLR2J2	Q9GZM3	115 aa	Known RBP	13.19	□□□□□ -0.3
TAF1C-212	ENST00000564774	PAK6	Q9NQU5	681 aa	Predicted RBP	13.19	□□□□□ -0.3
TAF1C-212	ENST00000564774	RSL24D1	Q9UHA3	163 aa	Known RBP	13.19	□□□□□ -0.3
TAF1C-212	ENST00000564774	ZFR2	Q9UPR6	939 aa	Known RBP	13.19	□□□□□ -0.3
TAF1C-212	ENST00000564774	HS3ST2	Q9Y278	367 aa		13.19	□□□□□ -0.3
TAF1C-212	ENST00000564774	CEP250	Q9BV73	2442 aa		13.19	□□□□□ -0.3
TAF1C-212	ENST00000564774	FAM155A	B1AL88	458 aa	Predicted RBP	13.18	□□□□□ -0.3
TAF1C-212	ENST00000564774	PSIP1	O75475	530 aa	Known RBP	13.18	□□□□□ -0.3
TAF1C-212	ENST00000564774	SNX4	O95219	450 aa		13.18	□□□□□ -0.3
TAF1C-212	ENST00000564774	PVR	P15151	417 aa		13.18	□□□□□ -0.3
TAF1C-212	ENST00000564774	ECHS1	P30084	290 aa		13.18	□□□□□ -0.3
TAF1C-212	ENST00000564774	GSTT1	P30711	240 aa		13.18	□□□□□ -0.3
TAF1C-212	ENST00000564774	ERVPABLB-1	P60509	514 aa		13.18	□□□□□ -0.3
TAF1C-212	ENST00000564774	PPP3R1	P63098	170 aa		13.18	□□□□□ -0.3
TAF1C-212	ENST00000564774	SHISA6	Q6ZSJ9	500 aa		13.18	□□□□□ -0.3
TAF1C-212	ENST00000564774	COMMD6	Q7Z4G1	85 aa		13.18	□□□□□ -0.3
TAF1C-212	ENST00000564774	UBQLNL	Q8IYU4	475 aa		13.18	□□□□□ -0.3
TAF1C-212	ENST00000564774	ZNF676	Q8N7Q3	588 aa		13.18	□□□□□ -0.3
TAF1C-212	ENST00000564774	BIRC7	Q96CA5	298 aa		13.18	□□□□□ -0.3
TAF1C-212	ENST00000564774	HSPBAP1	Q96EW2	488 aa		13.18	□□□□□ -0.3
TAF1C-212	ENST00000564774	ALPK1	Q96QP1	1244 aa		13.18	□□□□□ -0.3
TAF1C-212	ENST00000564774	TNRC6C	Q9HCJ0	1690 aa	Known RBP	13.18	□□□□□ -0.3
TAF1C-212	ENST00000564774		H0YC42	278 aa		13.18	□□□□□ -0.3
TAF1C-212	ENST00000564774	PSMD9	O00233	223 aa		13.18	□□□□□ -0.3
TAF1C-212	ENST00000564774	BCAT2	O15382	392 aa	Predicted RBP	13.18	□□□□□ -0.3
TAF1C-212	ENST00000564774	FAM189A1	O60320	539 aa		13.18	□□□□□ -0.3
TAF1C-212	ENST00000564774	INMT	O95050	263 aa		13.18	□□□□□ -0.3
TAF1C-212	ENST00000564774	NUDT6	P53370	316 aa		13.18	□□□□□ -0.3
TAF1C-212	ENST00000564774	IQCC	Q4KMZ1	466 aa		13.18	□□□□□ -0.3
TAF1C-212	ENST00000564774	TMEM35A	Q53FP2	167 aa		13.18	□□□□□ -0.3
TAF1C-212	ENST00000564774	TMEM225	Q6GV28	225 aa		13.18	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms