RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 CCDC86Q9H6F5 360 aaKnown RBP12.24□□□□□ -0.45
SPG7-209ENST00000564047 ANKHQ9HCJ1 492 aa12.24□□□□□ -0.45
SPG7-209ENST00000564047 FBXO8Q9NRD0 319 aa12.24□□□□□ -0.45
SPG7-209ENST00000564047 ZIM2Q9NZV7 527 aa12.24□□□□□ -0.45
SPG7-209ENST00000564047 HEATR5BQ9P2D3 2071 aa12.24□□□□□ -0.45
SPG7-209ENST00000564047 CLCA2Q9UQC9 943 aa12.24□□□□□ -0.45
SPG7-209ENST00000564047 SNRNP200O75643 2136 aaKnown RBP12.23□□□□□ -0.45
SPG7-209ENST00000564047 A0A0G2JN53 185 aa12.23□□□□□ -0.45
SPG7-209ENST00000564047 PSMD12O00232 456 aaPredicted RBP12.23□□□□□ -0.45
SPG7-209ENST00000564047 ANKRD28O15084 1053 aa12.23□□□□□ -0.45
SPG7-209ENST00000564047 B3GALT2O43825 422 aa12.23□□□□□ -0.45
SPG7-209ENST00000564047 PRMT3O60678 531 aa12.23□□□□□ -0.45
SPG7-209ENST00000564047 KLHL18O94889 574 aa12.23□□□□□ -0.45
SPG7-209ENST00000564047 NSA2O95478 260 aaKnown RBP12.23□□□□□ -0.45
SPG7-209ENST00000564047 GBAP04062 536 aa12.23□□□□□ -0.45
SPG7-209ENST00000564047 TACR1P25103 407 aa12.23□□□□□ -0.45
SPG7-209ENST00000564047 ASMTP46597 345 aa12.23□□□□□ -0.45
SPG7-209ENST00000564047 MAPK12P53778 367 aa12.23□□□□□ -0.45
SPG7-209ENST00000564047 CLDN8P56748 225 aa12.23□□□□□ -0.45
SPG7-209ENST00000564047 C21orf58P58505 322 aa12.23□□□□□ -0.45
SPG7-209ENST00000564047 SNRPNP63162 240 aaKnown RBP12.23□□□□□ -0.45
SPG7-209ENST00000564047 SLAMF1Q13291 335 aa12.23□□□□□ -0.45
SPG7-209ENST00000564047 EIF3IQ13347 325 aaKnown RBP12.23□□□□□ -0.45
SPG7-209ENST00000564047 UBAP2LQ14157 1087 aaKnown RBP12.23□□□□□ -0.45
SPG7-209ENST00000564047 PTGR1Q14914 329 aa12.23□□□□□ -0.45
SPG7-209ENST00000564047 SLC9A5Q14940 896 aa12.23□□□□□ -0.45
SPG7-209ENST00000564047 DEFB134Q4QY38 66 aa12.23□□□□□ -0.45
SPG7-209ENST00000564047 MRM1Q6IN84 353 aaKnown RBP12.23□□□□□ -0.45
SPG7-209ENST00000564047 IKBIPQ70UQ0 350 aa12.23□□□□□ -0.45
SPG7-209ENST00000564047 PPP1R3BQ86XI6 285 aa12.23□□□□□ -0.45
SPG7-209ENST00000564047 KIF2BQ8N4N8 673 aa12.23□□□□□ -0.45
SPG7-209ENST00000564047 AMER3Q8N944 861 aa12.23□□□□□ -0.45
SPG7-209ENST00000564047 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.23□□□□□ -0.45
SPG7-209ENST00000564047 C16orf78Q8WTQ4 265 aa12.23□□□□□ -0.45
SPG7-209ENST00000564047 MVB12AQ96EY5 273 aa12.23□□□□□ -0.45
SPG7-209ENST00000564047 CCDC106Q9BWC9 280 aa12.23□□□□□ -0.45
SPG7-209ENST00000564047 NPLQ9BXD5 320 aaPredicted RBP12.23□□□□□ -0.45
SPG7-209ENST00000564047 ACTL8Q9H568 366 aa12.23□□□□□ -0.45
SPG7-209ENST00000564047 CLK4Q9HAZ1 481 aaKnown RBP12.23□□□□□ -0.45
SPG7-209ENST00000564047 MYNNQ9NPC7 610 aa12.23□□□□□ -0.45
SPG7-209ENST00000564047 CUTCQ9NTM9 273 aa12.23□□□□□ -0.45
SPG7-209ENST00000564047 LYARQ9NX58 379 aaKnown RBP12.23□□□□□ -0.45
SPG7-209ENST00000564047 BAIAP2L1Q9UHR4 511 aa12.23□□□□□ -0.45
SPG7-209ENST00000564047 SRPK3Q9UPE1 567 aa12.23□□□□□ -0.45
SPG7-209ENST00000564047 MAPRE3Q9UPY8 281 aa12.23□□□□□ -0.45
SPG7-209ENST00000564047 NAALAD2Q9Y3Q0 740 aa12.23□□□□□ -0.45
SPG7-209ENST00000564047 LOXL2Q9Y4K0 774 aa12.23□□□□□ -0.45
SPG7-209ENST00000564047 CCDC187A0A096LP49 1063 aa12.22□□□□□ -0.45
SPG7-209ENST00000564047 H0YIG0 161 aa12.22□□□□□ -0.45
SPG7-209ENST00000564047 POLR1CO15160 346 aaPredicted RBP12.22□□□□□ -0.45
SPG7-209ENST00000564047 ZNF749O43361 778 aa12.22□□□□□ -0.45
SPG7-209ENST00000564047 FOXS1O43638 330 aa12.22□□□□□ -0.45
SPG7-209ENST00000564047 TMPRSS11DO60235 418 aa12.22□□□□□ -0.45
SPG7-209ENST00000564047 GUCY1B2O75343 617 aa12.22□□□□□ -0.45
SPG7-209ENST00000564047 SLC22A3O75751 556 aa12.22□□□□□ -0.45
SPG7-209ENST00000564047 MED26O95402 600 aa12.22□□□□□ -0.45
SPG7-209ENST00000564047 B3GALT4O96024 378 aa12.22□□□□□ -0.45
SPG7-209ENST00000564047 HBQ1P09105 142 aa12.22□□□□□ -0.45
SPG7-209ENST00000564047 FAM58BPP0C7Q3 252 aa12.22□□□□□ -0.45
SPG7-209ENST00000564047 CCL4P13236 92 aa12.22□□□□□ -0.45
SPG7-209ENST00000564047 IL1RNP18510 177 aa12.22□□□□□ -0.45
SPG7-209ENST00000564047 PRPS1L1P21108 318 aa12.22□□□□□ -0.45
SPG7-209ENST00000564047 JAK1P23458 1154 aa12.22□□□□□ -0.45
SPG7-209ENST00000564047 CERS1P27544 350 aa12.22□□□□□ -0.45
SPG7-209ENST00000564047 AVPR1BP47901 424 aa12.22□□□□□ -0.45
SPG7-209ENST00000564047 MNAT1P51948 309 aa12.22□□□□□ -0.45
SPG7-209ENST00000564047 CLDN6P56747 220 aa12.22□□□□□ -0.45
SPG7-209ENST00000564047 UFM1P61960 85 aa12.22□□□□□ -0.45
SPG7-209ENST00000564047 KLF10Q13118 480 aa12.22□□□□□ -0.45
SPG7-209ENST00000564047 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.22□□□□□ -0.45
SPG7-209ENST00000564047 RHBDD2Q6NTF9 364 aa12.22□□□□□ -0.45
SPG7-209ENST00000564047 RAB11FIP2Q7L804 512 aa12.22□□□□□ -0.45
SPG7-209ENST00000564047 PRSS41Q7RTY9 318 aa12.22□□□□□ -0.45
SPG7-209ENST00000564047 TMPRSS12Q86WS5 348 aa12.22□□□□□ -0.45
SPG7-209ENST00000564047 PDSS2Q86YH6 399 aa12.22□□□□□ -0.45
SPG7-209ENST00000564047 TMEM132CQ8N3T6 1108 aa12.22□□□□□ -0.45
SPG7-209ENST00000564047 GLB1L3Q8NCI6 653 aaPredicted RBP12.22□□□□□ -0.45
SPG7-209ENST00000564047 PROKR1Q8TCW9 393 aa12.22□□□□□ -0.45
SPG7-209ENST00000564047 STARD8Q92502 1023 aa12.22□□□□□ -0.45
SPG7-209ENST00000564047 UTP4Q969X6 686 aaKnown RBP12.22□□□□□ -0.45
SPG7-209ENST00000564047 TM4SF18Q96CE8 201 aa12.22□□□□□ -0.45
SPG7-209ENST00000564047 EGLN2Q96KS0 407 aa12.22□□□□□ -0.45
SPG7-209ENST00000564047 BBC3Q96PG8 261 aaPredicted RBP12.22□□□□□ -0.45
SPG7-209ENST00000564047 TSSK3Q96PN8 268 aa12.22□□□□□ -0.45
SPG7-209ENST00000564047 DPY30Q9C005 99 aa12.22□□□□□ -0.45
SPG7-209ENST00000564047 LYRM4Q9HD34 91 aa12.22□□□□□ -0.45
SPG7-209ENST00000564047 ARMCX1Q9P291 453 aa12.22□□□□□ -0.45
SPG7-209ENST00000564047 CDC14AQ9UNH5 594 aa12.22□□□□□ -0.45
SPG7-209ENST00000564047 PCDHB3Q9Y5E6 796 aa12.22□□□□□ -0.45
SPG7-209ENST00000564047 COL27A1Q8IZC6 1860 aaPredicted RBP12.22□□□□□ -0.45
SPG7-209ENST00000564047 TENM4Q6N022 2769 aa12.22□□□□□ -0.45
SPG7-209ENST00000564047 UNC13CQ8NB66 2214 aa12.21□□□□□ -0.45
SPG7-209ENST00000564047 A0A0A6YYC8 382 aaPredicted RBP12.21□□□□□ -0.45
SPG7-209ENST00000564047 CAPN14A8MX76 684 aa12.21□□□□□ -0.45
SPG7-209ENST00000564047 I3L1I5 382 aaPredicted RBP12.21□□□□□ -0.45
SPG7-209ENST00000564047 AGRPO00253 132 aa12.21□□□□□ -0.45
SPG7-209ENST00000564047 DSCR3O14972 297 aa12.21□□□□□ -0.45
SPG7-209ENST00000564047 SCRG1O75711 98 aa12.21□□□□□ -0.45
SPG7-209ENST00000564047 CBX6O95503 412 aa12.21□□□□□ -0.45
SPG7-209ENST00000564047 PIK3R1P27986 724 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms