RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 CCDC77Q9BR77 488 aa7.09□□□□□ -1.27
HERPUD1-206ENST00000563343 PIGQQ9BRB3 760 aa7.09□□□□□ -1.27
HERPUD1-206ENST00000563343 RBM24Q9BX46 236 aaKnown RBP7.09□□□□□ -1.27
HERPUD1-206ENST00000563343 FAM129AQ9BZQ8 928 aa7.09□□□□□ -1.27
HERPUD1-206ENST00000563343 AICDAQ9GZX7 198 aa7.09□□□□□ -1.27
HERPUD1-206ENST00000563343 EXO5Q9H790 373 aa7.09□□□□□ -1.27
HERPUD1-206ENST00000563343 UBTD1Q9HAC8 227 aa7.09□□□□□ -1.27
HERPUD1-206ENST00000563343 LMBRD1Q9NUN5 540 aa7.09□□□□□ -1.27
HERPUD1-206ENST00000563343 ZNHIT6Q9NWK9 470 aaKnown RBP7.09□□□□□ -1.27
HERPUD1-206ENST00000563343 QPCTLQ9NXS2 382 aa7.09□□□□□ -1.27
HERPUD1-206ENST00000563343 EIF3LQ9Y262 564 aaKnown RBP7.09□□□□□ -1.27
HERPUD1-206ENST00000563343 EFR3BQ9Y2G0 817 aa7.09□□□□□ -1.27
HERPUD1-206ENST00000563343 MMACHCQ9Y4U1 282 aa7.09□□□□□ -1.27
HERPUD1-206ENST00000563343 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.09□□□□□ -1.27
HERPUD1-206ENST00000563343 CTAGE15A4D2H0 777 aa7.08□□□□□ -1.28
HERPUD1-206ENST00000563343 PSMD3O43242 534 aa7.08□□□□□ -1.28
HERPUD1-206ENST00000563343 CEP104O60308 925 aa7.08□□□□□ -1.28
HERPUD1-206ENST00000563343 ZNF888P0CJ79 500 aaPredicted RBP7.08□□□□□ -1.28
HERPUD1-206ENST00000563343 RNH1P13489 461 aaKnown RBP7.08□□□□□ -1.28
HERPUD1-206ENST00000563343 CRYGSP22914 178 aa7.08□□□□□ -1.28
HERPUD1-206ENST00000563343 ARNTP27540 789 aa7.08□□□□□ -1.28
HERPUD1-206ENST00000563343 SOX18P35713 384 aa7.08□□□□□ -1.28
HERPUD1-206ENST00000563343 MC3RP41968 323 aa7.08□□□□□ -1.28
HERPUD1-206ENST00000563343 TRPC1P48995 793 aa7.08□□□□□ -1.28
HERPUD1-206ENST00000563343 HNRNPFP52597 415 aaKnown RBP7.08□□□□□ -1.28
HERPUD1-206ENST00000563343 TBPL1P62380 186 aa7.08□□□□□ -1.28
HERPUD1-206ENST00000563343 DUSP8Q13202 625 aa7.08□□□□□ -1.28
HERPUD1-206ENST00000563343 PWP1Q13610 501 aa7.08□□□□□ -1.28
HERPUD1-206ENST00000563343 ZNF791Q3KP31 576 aaPredicted RBP7.08□□□□□ -1.28
HERPUD1-206ENST00000563343 CHRFAM7AQ494W8 412 aa7.08□□□□□ -1.28
HERPUD1-206ENST00000563343 RNF187Q5TA31 235 aaPredicted RBP7.08□□□□□ -1.28
HERPUD1-206ENST00000563343 THEMIS2Q5TEJ8 643 aa7.08□□□□□ -1.28
HERPUD1-206ENST00000563343 HECTD2Q5U5R9 776 aa7.08□□□□□ -1.28
HERPUD1-206ENST00000563343 VASNQ6EMK4 673 aa7.08□□□□□ -1.28
HERPUD1-206ENST00000563343 LYPD8Q6UX82 237 aa7.08□□□□□ -1.28
HERPUD1-206ENST00000563343 CYHR1Q6ZMK1 362 aa7.08□□□□□ -1.28
HERPUD1-206ENST00000563343 LINC00523Q86TU6 105 aa7.08□□□□□ -1.28
HERPUD1-206ENST00000563343 CTAGE6Q86UF2 777 aa7.08□□□□□ -1.28
HERPUD1-206ENST00000563343 RETREG3Q86VR2 466 aa7.08□□□□□ -1.28
HERPUD1-206ENST00000563343 CA13Q8N1Q1 262 aa7.08□□□□□ -1.28
HERPUD1-206ENST00000563343 MPP5Q8N3R9 675 aa7.08□□□□□ -1.28
HERPUD1-206ENST00000563343 RASGEF1CQ8N431 466 aa7.08□□□□□ -1.28
HERPUD1-206ENST00000563343 FAM71DQ8N9W8 422 aa7.08□□□□□ -1.28
HERPUD1-206ENST00000563343 C9orf106Q8NAJ2 232 aa7.08□□□□□ -1.28
HERPUD1-206ENST00000563343 TMEM52Q8NDY8 209 aa7.08□□□□□ -1.28
HERPUD1-206ENST00000563343 OR4K1Q8NGD4 311 aa7.08□□□□□ -1.28
HERPUD1-206ENST00000563343 GIMAP7Q8NHV1 300 aa7.08□□□□□ -1.28
HERPUD1-206ENST00000563343 NT5CQ8TCD5 201 aa7.08□□□□□ -1.28
HERPUD1-206ENST00000563343 WFIKKN1Q96NZ8 548 aa7.08□□□□□ -1.28
HERPUD1-206ENST00000563343 OSBPL8Q9BZF1 889 aa7.08□□□□□ -1.28
HERPUD1-206ENST00000563343 SPNS1Q9H2V7 528 aa7.08□□□□□ -1.28
HERPUD1-206ENST00000563343 CLK4Q9HAZ1 481 aaKnown RBP7.08□□□□□ -1.28
HERPUD1-206ENST00000563343 CCDC177Q9NQR7 707 aaPredicted RBP7.08□□□□□ -1.28
HERPUD1-206ENST00000563343 PNO1Q9NRX1 252 aaKnown RBP7.08□□□□□ -1.28
HERPUD1-206ENST00000563343 TREX1Q9NSU2 369 aa7.08□□□□□ -1.28
HERPUD1-206ENST00000563343 SPTLC3Q9NUV7 552 aa7.08□□□□□ -1.28
HERPUD1-206ENST00000563343 SAMD15Q9P1V8 674 aa7.08□□□□□ -1.28
HERPUD1-206ENST00000563343 ANAPC5Q9UJX4 755 aa7.08□□□□□ -1.28
HERPUD1-206ENST00000563343 MED16Q9Y2X0 877 aa7.08□□□□□ -1.28
HERPUD1-206ENST00000563343 WIF1Q9Y5W5 379 aa7.08□□□□□ -1.28
HERPUD1-206ENST00000563343 PRR14LQ5THK1 2151 aa7.08□□□□□ -1.28
HERPUD1-206ENST00000563343 MACROD2A1Z1Q3 448 aa7.07□□□□□ -1.28
HERPUD1-206ENST00000563343 A8MXE2 369 aa7.07□□□□□ -1.28
HERPUD1-206ENST00000563343 CASKO14936 926 aa7.07□□□□□ -1.28
HERPUD1-206ENST00000563343 NDUFS4O43181 175 aa7.07□□□□□ -1.28
HERPUD1-206ENST00000563343 NDUFS3O75489 264 aa7.07□□□□□ -1.28
HERPUD1-206ENST00000563343 SYF2O95926 243 aaKnown RBP7.07□□□□□ -1.28
HERPUD1-206ENST00000563343 P04436 131 aa7.07□□□□□ -1.28
HERPUD1-206ENST00000563343 MPC1LP0DKB6 136 aa7.07□□□□□ -1.28
HERPUD1-206ENST00000563343 TMIGD3P0DMS9 266 aaPredicted RBP7.07□□□□□ -1.28
HERPUD1-206ENST00000563343 CDH1P12830 882 aa7.07□□□□□ -1.28
HERPUD1-206ENST00000563343 FMO4P31512 558 aa7.07□□□□□ -1.28
HERPUD1-206ENST00000563343 SLCO1A2P46721 670 aa7.07□□□□□ -1.28
HERPUD1-206ENST00000563343 MMP16P51512 607 aa7.07□□□□□ -1.28
HERPUD1-206ENST00000563343 CLCN7P51798 805 aa7.07□□□□□ -1.28
HERPUD1-206ENST00000563343 RAB8AP61006 207 aa7.07□□□□□ -1.28
HERPUD1-206ENST00000563343 P3H1Q32P28 736 aa7.07□□□□□ -1.28
HERPUD1-206ENST00000563343 NHSL2Q5HYW2 709 aa7.07□□□□□ -1.28
HERPUD1-206ENST00000563343 DCST1Q5T197 706 aa7.07□□□□□ -1.28
HERPUD1-206ENST00000563343 NIPAL1Q6NVV3 410 aa7.07□□□□□ -1.28
HERPUD1-206ENST00000563343 AADACL2Q6P093 401 aa7.07□□□□□ -1.28
HERPUD1-206ENST00000563343 OPN5Q6U736 354 aa7.07□□□□□ -1.28
HERPUD1-206ENST00000563343 HSDL2Q6YN16 418 aa7.07□□□□□ -1.28
HERPUD1-206ENST00000563343 LUZP2Q86TE4 346 aa7.07□□□□□ -1.28
HERPUD1-206ENST00000563343 C17orf64Q86WR6 236 aa7.07□□□□□ -1.28
HERPUD1-206ENST00000563343 PPHLN1Q8NEY8 458 aaKnown RBP7.07□□□□□ -1.28
HERPUD1-206ENST00000563343 ABHD11Q8NFV4 315 aa7.07□□□□□ -1.28
HERPUD1-206ENST00000563343 OR8K3Q8NH51 312 aa7.07□□□□□ -1.28
HERPUD1-206ENST00000563343 PAQR8Q8TEZ7 354 aa7.07□□□□□ -1.28
HERPUD1-206ENST00000563343 SREK1Q8WXA9 508 aaKnown RBP7.07□□□□□ -1.28
HERPUD1-206ENST00000563343 IQCDQ96DY2 449 aa7.07□□□□□ -1.28
HERPUD1-206ENST00000563343 PIK3IP1Q96FE7 263 aa7.07□□□□□ -1.28
HERPUD1-206ENST00000563343 WDYHV1Q96HA8 205 aa7.07□□□□□ -1.28
HERPUD1-206ENST00000563343 CHP1Q99653 195 aa7.07□□□□□ -1.28
HERPUD1-206ENST00000563343 SGPP1Q9BX95 441 aa7.07□□□□□ -1.28
HERPUD1-206ENST00000563343 REG4Q9BYZ8 158 aa7.07□□□□□ -1.28
HERPUD1-206ENST00000563343 CALHM2Q9HA72 323 aa7.07□□□□□ -1.28
HERPUD1-206ENST00000563343 ZFP64Q9NPA5 681 aa7.07□□□□□ -1.28
HERPUD1-206ENST00000563343 ADAP2Q9NPF8 381 aa7.07□□□□□ -1.28
HERPUD1-206ENST00000563343 CHRAC1Q9NRG0 131 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms