RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 SNRPGP62308 76 aaKnown RBP12.51□□□□□ -0.41
USB1-207ENST00000563149 KCNJ8Q15842 424 aa12.51□□□□□ -0.41
USB1-207ENST00000563149 PLAG1Q6DJT9 500 aa12.51□□□□□ -0.41
USB1-207ENST00000563149 REEP3Q6NUK4 255 aa12.51□□□□□ -0.41
USB1-207ENST00000563149 ERAP2Q6P179 960 aa12.51□□□□□ -0.41
USB1-207ENST00000563149 LILRA6Q6PI73 481 aa12.51□□□□□ -0.41
USB1-207ENST00000563149 LIPIQ6XZB0 460 aa12.51□□□□□ -0.41
USB1-207ENST00000563149 CCDC190Q86UF4 302 aa12.51□□□□□ -0.41
USB1-207ENST00000563149 LILRA3Q8N6C8 439 aaPredicted RBP12.51□□□□□ -0.41
USB1-207ENST00000563149 WDR48Q8TAF3 677 aa12.51□□□□□ -0.41
USB1-207ENST00000563149 PDXPQ96GD0 296 aa12.51□□□□□ -0.41
USB1-207ENST00000563149 TRNT1Q96Q11 434 aaKnown RBP12.51□□□□□ -0.41
USB1-207ENST00000563149 YME1L1Q96TA2 773 aa12.51□□□□□ -0.41
USB1-207ENST00000563149 CHCHD6Q9BRQ6 235 aa12.51□□□□□ -0.41
USB1-207ENST00000563149 CENPOQ9BU64 300 aa12.51□□□□□ -0.41
USB1-207ENST00000563149 WRAP53Q9BUR4 548 aaKnown RBP12.51□□□□□ -0.41
USB1-207ENST00000563149 ZCCHC2Q9C0B9 1178 aaKnown RBP12.51□□□□□ -0.41
USB1-207ENST00000563149 C3orf14Q9HBI5 128 aa12.51□□□□□ -0.41
USB1-207ENST00000563149 FZD3Q9NPG1 666 aa12.51□□□□□ -0.41
USB1-207ENST00000563149 SPHK2Q9NRA0 654 aa12.51□□□□□ -0.41
USB1-207ENST00000563149 AHSPQ9NZD4 102 aa12.51□□□□□ -0.41
USB1-207ENST00000563149 NDOR1Q9UHB4 597 aa12.51□□□□□ -0.41
USB1-207ENST00000563149 MGAT4BQ9UQ53 548 aa12.51□□□□□ -0.41
USB1-207ENST00000563149 TRAPPC4Q9Y296 219 aa12.51□□□□□ -0.41
USB1-207ENST00000563149 MAP4K5Q9Y4K4 846 aa12.51□□□□□ -0.41
USB1-207ENST00000563149 PCDHGB6Q9Y5F9 930 aa12.51□□□□□ -0.41
USB1-207ENST00000563149 DSPPQ9NZW4 1301 aa12.5□□□□□ -0.41
USB1-207ENST00000563149 NUP214P35658 2090 aaPredicted RBP12.5□□□□□ -0.41
USB1-207ENST00000563149 ASNA1O43681 348 aa12.5□□□□□ -0.41
USB1-207ENST00000563149 PI15O43692 258 aa12.5□□□□□ -0.41
USB1-207ENST00000563149 KLHL18O94889 574 aa12.5□□□□□ -0.41
USB1-207ENST00000563149 KCNK2O95069 426 aa12.5□□□□□ -0.41
USB1-207ENST00000563149 FGF19O95750 216 aa12.5□□□□□ -0.41
USB1-207ENST00000563149 APOA1P02647 267 aa12.5□□□□□ -0.41
USB1-207ENST00000563149 C8AP07357 584 aa12.5□□□□□ -0.41
USB1-207ENST00000563149 ELFN1P0C7U0 828 aa12.5□□□□□ -0.41
USB1-207ENST00000563149 TYRP14679 529 aa12.5□□□□□ -0.41
USB1-207ENST00000563149 GJA1P17302 382 aa12.5□□□□□ -0.41
USB1-207ENST00000563149 CD72P21854 359 aa12.5□□□□□ -0.41
USB1-207ENST00000563149 MMP12P39900 470 aa12.5□□□□□ -0.41
USB1-207ENST00000563149 MC1RQ01726 317 aa12.5□□□□□ -0.41
USB1-207ENST00000563149 ILKQ13418 452 aa12.5□□□□□ -0.41
USB1-207ENST00000563149 NCF4Q15080 339 aa12.5□□□□□ -0.41
USB1-207ENST00000563149 SPANXN2Q5MJ10 180 aa12.5□□□□□ -0.41
USB1-207ENST00000563149 TMEM201Q5SNT2 666 aa12.5□□□□□ -0.41
USB1-207ENST00000563149 ATAD3BQ5T9A4 648 aa12.5□□□□□ -0.41
USB1-207ENST00000563149 RNLSQ5VYX0 342 aa12.5□□□□□ -0.41
USB1-207ENST00000563149 KLHL17Q6TDP4 642 aa12.5□□□□□ -0.41
USB1-207ENST00000563149 ANKRD33Q7Z3H0 272 aa12.5□□□□□ -0.41
USB1-207ENST00000563149 TRIM69Q86WT6 500 aa12.5□□□□□ -0.41
USB1-207ENST00000563149 KRT73Q86Y46 540 aa12.5□□□□□ -0.41
USB1-207ENST00000563149 LRRC56Q8IYG6 542 aaPredicted RBP12.5□□□□□ -0.41
USB1-207ENST00000563149 TAGAPQ8N103 731 aa12.5□□□□□ -0.41
USB1-207ENST00000563149 AQP11Q8NBQ7 271 aa12.5□□□□□ -0.41
USB1-207ENST00000563149 HTRA1Q92743 480 aa12.5□□□□□ -0.41
USB1-207ENST00000563149 FOXJ1Q92949 421 aa12.5□□□□□ -0.41
USB1-207ENST00000563149 CIDECQ96AQ7 238 aaPredicted RBP12.5□□□□□ -0.41
USB1-207ENST00000563149 MRGPRX3Q96LB0 322 aa12.5□□□□□ -0.41
USB1-207ENST00000563149 SAMD11Q96NU1 681 aa12.5□□□□□ -0.41
USB1-207ENST00000563149 CTRCQ99895 268 aa12.5□□□□□ -0.41
USB1-207ENST00000563149 TAPBPLQ9BX59 468 aa12.5□□□□□ -0.41
USB1-207ENST00000563149 ZBP1Q9H171 429 aa12.5□□□□□ -0.41
USB1-207ENST00000563149 NMNAT1Q9HAN9 279 aaPredicted RBP12.5□□□□□ -0.41
USB1-207ENST00000563149 SLC25A19Q9HC21 320 aa12.5□□□□□ -0.41
USB1-207ENST00000563149 NPAP1Q9NZP6 1156 aa12.5□□□□□ -0.41
USB1-207ENST00000563149 SPATA7Q9P0W8 599 aa12.5□□□□□ -0.41
USB1-207ENST00000563149 TBC1D14Q9P2M4 693 aa12.5□□□□□ -0.41
USB1-207ENST00000563149 RAB23Q9ULC3 237 aa12.5□□□□□ -0.41
USB1-207ENST00000563149 TMCC3Q9ULS5 477 aa12.5□□□□□ -0.41
USB1-207ENST00000563149 ALPK3Q96L96 1907 aa12.49□□□□□ -0.41
USB1-207ENST00000563149 C17orf113A0A1B0GUU1 675 aa12.49□□□□□ -0.41
USB1-207ENST00000563149 DYRK3O43781 588 aa12.49□□□□□ -0.41
USB1-207ENST00000563149 KIAA0513O60268 411 aa12.49□□□□□ -0.41
USB1-207ENST00000563149 PDE9AO76083 593 aa12.49□□□□□ -0.41
USB1-207ENST00000563149 GASTP01350 101 aa12.49□□□□□ -0.41
USB1-207ENST00000563149 OSMP13725 252 aa12.49□□□□□ -0.41
USB1-207ENST00000563149 CSTF2P33240 577 aaKnown RBP eCLIP12.49□□□□□ -0.41
USB1-207ENST00000563149 SOAT1P35610 550 aa12.49□□□□□ -0.41
USB1-207ENST00000563149 SEPHS1P49903 392 aa12.49□□□□□ -0.41
USB1-207ENST00000563149 PRMT2P55345 433 aa12.49□□□□□ -0.41
USB1-207ENST00000563149 MED22Q15528 200 aa12.49□□□□□ -0.41
USB1-207ENST00000563149 TSTQ16762 297 aaKnown RBP12.49□□□□□ -0.41
USB1-207ENST00000563149 CCDC92Q53HC0 331 aaPredicted RBP12.49□□□□□ -0.41
USB1-207ENST00000563149 ZNF770Q6IQ21 691 aaPredicted RBP12.49□□□□□ -0.41
USB1-207ENST00000563149 ATCAYQ86WG3 371 aa12.49□□□□□ -0.41
USB1-207ENST00000563149 CYP4Z2PQ8N1L4 340 aa12.49□□□□□ -0.41
USB1-207ENST00000563149 IL17RCQ8NAC3 791 aa12.49□□□□□ -0.41
USB1-207ENST00000563149 FAM83FQ8NEG4 500 aaPredicted RBP12.49□□□□□ -0.41
USB1-207ENST00000563149 OR5P2Q8WZ92 322 aa12.49□□□□□ -0.41
USB1-207ENST00000563149 GTPBP3Q969Y2 492 aaKnown RBP12.49□□□□□ -0.41
USB1-207ENST00000563149 ZNF514Q96K75 400 aaPredicted RBP12.49□□□□□ -0.41
USB1-207ENST00000563149 LINC00615Q96LM1 132 aaPredicted RBP12.49□□□□□ -0.41
USB1-207ENST00000563149 CORO1BQ9BR76 489 aa12.49□□□□□ -0.41
USB1-207ENST00000563149 NUAK2Q9H093 628 aa12.49□□□□□ -0.41
USB1-207ENST00000563149 SMG9Q9H0W8 520 aaKnown RBP12.49□□□□□ -0.41
USB1-207ENST00000563149 OR51B5Q9H339 312 aa12.49□□□□□ -0.41
USB1-207ENST00000563149 A4GALTQ9NPC4 353 aa12.49□□□□□ -0.41
USB1-207ENST00000563149 CCDC177Q9NQR7 707 aaPredicted RBP12.49□□□□□ -0.41
USB1-207ENST00000563149 ACSL6Q9UKU0 697 aa12.49□□□□□ -0.41
USB1-207ENST00000563149 ABHD14A-ACY1A0A1B0GW23 586 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms