RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, human

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TPM1-231	ENST00000561395	PUM2	Q8TB72	1066 aa	Known RBP eCLIP	7.16	□□□□□ -1.26
TPM1-231	ENST00000561395	LMX1A	Q8TE12	382 aa		7.16	□□□□□ -1.26
TPM1-231	ENST00000561395	CREB3L4	Q8TEY5	395 aa		7.16	□□□□□ -1.26
TPM1-231	ENST00000561395	C16orf78	Q8WTQ4	265 aa		7.16	□□□□□ -1.26
TPM1-231	ENST00000561395	GFM2	Q969S9	779 aa	Known RBP	7.16	□□□□□ -1.26
TPM1-231	ENST00000561395	KCTD12	Q96CX2	325 aa	Known RBP	7.16	□□□□□ -1.26
TPM1-231	ENST00000561395	ASB9	Q96DX5	294 aa		7.16	□□□□□ -1.26
TPM1-231	ENST00000561395	PPM1M	Q96MI6	270 aa		7.16	□□□□□ -1.26
TPM1-231	ENST00000561395	OR2A14	Q96R47	310 aa		7.16	□□□□□ -1.26
TPM1-231	ENST00000561395	OR52E6	Q96RD3	313 aa		7.16	□□□□□ -1.26
TPM1-231	ENST00000561395	F2RL3	Q96RI0	385 aa		7.16	□□□□□ -1.26
TPM1-231	ENST00000561395	CGREF1	Q99674	301 aa		7.16	□□□□□ -1.26
TPM1-231	ENST00000561395	CENPK	Q9BS16	269 aa		7.16	□□□□□ -1.26
TPM1-231	ENST00000561395	ZNF717	Q9BY31	904 aa	Predicted RBP	7.16	□□□□□ -1.26
TPM1-231	ENST00000561395	AICDA	Q9GZX7	198 aa		7.16	□□□□□ -1.26
TPM1-231	ENST00000561395	PAIP1	Q9H074	479 aa	Known RBP	7.16	□□□□□ -1.26
TPM1-231	ENST00000561395	DCLRE1B	Q9H816	532 aa		7.16	□□□□□ -1.26
TPM1-231	ENST00000561395	RMND5A	Q9H871	391 aa		7.16	□□□□□ -1.26
TPM1-231	ENST00000561395	UCK1	Q9HA47	277 aa		7.16	□□□□□ -1.26
TPM1-231	ENST00000561395	MYNN	Q9NPC7	610 aa		7.16	□□□□□ -1.26
TPM1-231	ENST00000561395	SERHL	Q9NQF3	203 aa		7.16	□□□□□ -1.26
TPM1-231	ENST00000561395	ACTR10	Q9NZ32	417 aa		7.16	□□□□□ -1.26
TPM1-231	ENST00000561395	AHSP	Q9NZD4	102 aa		7.16	□□□□□ -1.26
TPM1-231	ENST00000561395	ANKMY1	Q9P2S6	941 aa		7.16	□□□□□ -1.26
TPM1-231	ENST00000561395	SPAST	Q9UBP0	616 aa		7.16	□□□□□ -1.26
TPM1-231	ENST00000561395	NKX1-2	Q9UD57	310 aa	Predicted RBP	7.16	□□□□□ -1.26
TPM1-231	ENST00000561395	KLK4	Q9Y5K2	254 aa		7.16	□□□□□ -1.26
TPM1-231	ENST00000561395	ENTPD2	Q9Y5L3	495 aa		7.16	□□□□□ -1.26
TPM1-231	ENST00000561395	AP1M2	Q9Y6Q5	423 aa		7.16	□□□□□ -1.26
TPM1-231	ENST00000561395	CROCC	Q5TZA2	2017 aa		7.16	□□□□□ -1.26
TPM1-231	ENST00000561395	TLN1	Q9Y490	2541 aa	Known RBP	7.16	□□□□□ -1.26
TPM1-231	ENST00000561395	BSN	Q9UPA5	3926 aa		7.15	□□□□□ -1.26
TPM1-231	ENST00000561395	SPTBN1	Q01082	2364 aa	Known RBP	7.15	□□□□□ -1.26
TPM1-231	ENST00000561395	CREBBP	Q92793	2442 aa		7.15	□□□□□ -1.26
TPM1-231	ENST00000561395	DOPEY1	Q5JWR5	2465 aa		7.15	□□□□□ -1.26
TPM1-231	ENST00000561395		A0A096LPI6	279 aa		7.15	□□□□□ -1.26
TPM1-231	ENST00000561395	TRBV5-3	A0A0A0MS03	114 aa		7.15	□□□□□ -1.26
TPM1-231	ENST00000561395		A0A0J9YY10	115 aa		7.15	□□□□□ -1.26
TPM1-231	ENST00000561395	GSAP	A4D1B5	854 aa		7.15	□□□□□ -1.26
TPM1-231	ENST00000561395	LILRA5	A6NI73	299 aa		7.15	□□□□□ -1.26
TPM1-231	ENST00000561395	C2orf74	A8MZ97	194 aa		7.15	□□□□□ -1.26
TPM1-231	ENST00000561395	LMO7DN	F2Z398	122 aa		7.15	□□□□□ -1.26
TPM1-231	ENST00000561395		H0Y3Z8	333 aa		7.15	□□□□□ -1.26
TPM1-231	ENST00000561395	ACOT8	O14734	319 aa		7.15	□□□□□ -1.26
TPM1-231	ENST00000561395	TERT	O14746	1132 aa	Known RBP	7.15	□□□□□ -1.26
TPM1-231	ENST00000561395	YY2	O15391	372 aa		7.15	□□□□□ -1.26
TPM1-231	ENST00000561395	ZW10	O43264	779 aa		7.15	□□□□□ -1.26
TPM1-231	ENST00000561395	AQP9	O43315	295 aa		7.15	□□□□□ -1.26
TPM1-231	ENST00000561395	NOBOX	O60393	691 aa		7.15	□□□□□ -1.26
TPM1-231	ENST00000561395	DNAJA2	O60884	412 aa		7.15	□□□□□ -1.26
TPM1-231	ENST00000561395	FKBP6	O75344	327 aa		7.15	□□□□□ -1.26
TPM1-231	ENST00000561395	ERN1	O75460	977 aa	Known RBP	7.15	□□□□□ -1.26
TPM1-231	ENST00000561395	PIAS2	O75928	621 aa		7.15	□□□□□ -1.26
TPM1-231	ENST00000561395	FKBP9	O95302	570 aa		7.15	□□□□□ -1.26
TPM1-231	ENST00000561395	GBA	P04062	536 aa		7.15	□□□□□ -1.26
TPM1-231	ENST00000561395	KLK1	P06870	262 aa		7.15	□□□□□ -1.26
TPM1-231	ENST00000561395	TCN1	P20061	433 aa	Predicted RBP	7.15	□□□□□ -1.26
TPM1-231	ENST00000561395	TPP2	P29144	1249 aa	Predicted RBP	7.15	□□□□□ -1.26
TPM1-231	ENST00000561395	MSX2	P35548	267 aa	Predicted RBP	7.15	□□□□□ -1.26
TPM1-231	ENST00000561395	RPL3	P39023	403 aa	Known RBP	7.15	□□□□□ -1.26
TPM1-231	ENST00000561395	GSTM5	P46439	218 aa		7.15	□□□□□ -1.26
TPM1-231	ENST00000561395	GCGR	P47871	477 aa		7.15	□□□□□ -1.26
TPM1-231	ENST00000561395	FASLG	P48023	281 aa		7.15	□□□□□ -1.26
TPM1-231	ENST00000561395	MAZ	P56270	477 aa	Known RBP	7.15	□□□□□ -1.26
TPM1-231	ENST00000561395	WNT3	P56703	355 aa		7.15	□□□□□ -1.26
TPM1-231	ENST00000561395	EEFSEC	P57772	596 aa	Known RBP	7.15	□□□□□ -1.26
TPM1-231	ENST00000561395	RPS15A	P62244	130 aa	Known RBP	7.15	□□□□□ -1.26
TPM1-231	ENST00000561395	PLIN5	Q00G26	463 aa		7.15	□□□□□ -1.26
TPM1-231	ENST00000561395	MS4A2	Q01362	244 aa		7.15	□□□□□ -1.26
TPM1-231	ENST00000561395	TRAP1	Q12931	704 aa	Known RBP	7.15	□□□□□ -1.26
TPM1-231	ENST00000561395	PDE7A	Q13946	482 aa		7.15	□□□□□ -1.26
TPM1-231	ENST00000561395	SELPLG	Q14242	412 aa		7.15	□□□□□ -1.26
TPM1-231	ENST00000561395	TRIM25	Q14258	630 aa	Known RBP	7.15	□□□□□ -1.26
TPM1-231	ENST00000561395	ADPRM	Q3LIE5	342 aa		7.15	□□□□□ -1.26
TPM1-231	ENST00000561395	RABL3	Q5HYI8	236 aa		7.15	□□□□□ -1.26
TPM1-231	ENST00000561395	LRIF1	Q5T3J3	769 aa		7.15	□□□□□ -1.26
TPM1-231	ENST00000561395	OR4F3	Q6IEY1	312 aa		7.15	□□□□□ -1.26
TPM1-231	ENST00000561395	FAM71E1	Q6IPT2	247 aa		7.15	□□□□□ -1.26
TPM1-231	ENST00000561395	NANOGP8	Q6NSW7	305 aa		7.15	□□□□□ -1.26
TPM1-231	ENST00000561395	SPESP1	Q6UW49	350 aa		7.15	□□□□□ -1.26
TPM1-231	ENST00000561395	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	7.15	□□□□□ -1.26
TPM1-231	ENST00000561395	R3HCC1L	Q7Z5L2	792 aa	Known RBP	7.15	□□□□□ -1.26
TPM1-231	ENST00000561395	UBE3D	Q7Z6J8	389 aa		7.15	□□□□□ -1.26
TPM1-231	ENST00000561395	GPR180	Q86V85	440 aa		7.15	□□□□□ -1.26
TPM1-231	ENST00000561395	C17orf82	Q86X59	251 aa	Predicted RBP	7.15	□□□□□ -1.26
TPM1-231	ENST00000561395	FAM156A	Q8NDB6	213 aa		7.15	□□□□□ -1.26
TPM1-231	ENST00000561395	TRPV3	Q8NET8	790 aa		7.15	□□□□□ -1.26
TPM1-231	ENST00000561395	OR7A2P	Q8NGA2	310 aa		7.15	□□□□□ -1.26
TPM1-231	ENST00000561395	OR8J3	Q8NGG0	315 aa		7.15	□□□□□ -1.26
TPM1-231	ENST00000561395	OR10G6	Q8NH81	332 aa		7.15	□□□□□ -1.26
TPM1-231	ENST00000561395	DNAJB14	Q8TBM8	379 aa		7.15	□□□□□ -1.26
TPM1-231	ENST00000561395	RGMA	Q96B86	450 aa		7.15	□□□□□ -1.26
TPM1-231	ENST00000561395	ITCH	Q96J02	903 aa		7.15	□□□□□ -1.26
TPM1-231	ENST00000561395	CNDP2	Q96KP4	475 aa	Known RBP	7.15	□□□□□ -1.26
TPM1-231	ENST00000561395	QRFPR	Q96P65	431 aa		7.15	□□□□□ -1.26
TPM1-231	ENST00000561395	SORBS1	Q9BX66	1292 aa	Known RBP	7.15	□□□□□ -1.26
TPM1-231	ENST00000561395	TRIM8	Q9BZR9	551 aa		7.15	□□□□□ -1.26
TPM1-231	ENST00000561395	REXO4	Q9GZR2	422 aa	Known RBP	7.15	□□□□□ -1.26
TPM1-231	ENST00000561395	REEP4	Q9H6H4	257 aa		7.15	□□□□□ -1.26
TPM1-231	ENST00000561395	SYNPO2L	Q9H987	977 aa		7.15	□□□□□ -1.26

Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms