RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 NAGLUP54802 743 aa13.04□□□□□ -0.32
TPM1-230ENST00000561266 TMEM35AQ53FP2 167 aa13.04□□□□□ -0.32
TPM1-230ENST00000561266 TNFAIP8L3Q5GJ75 292 aa13.04□□□□□ -0.32
TPM1-230ENST00000561266 C18orf63Q68DL7 685 aa13.04□□□□□ -0.32
TPM1-230ENST00000561266 MRM1Q6IN84 353 aaKnown RBP13.04□□□□□ -0.32
TPM1-230ENST00000561266 NIPAL1Q6NVV3 410 aa13.04□□□□□ -0.32
TPM1-230ENST00000561266 PAPD4Q6PIY7 484 aaKnown RBP13.04□□□□□ -0.32
TPM1-230ENST00000561266 SCIMPQ6UWF3 145 aa13.04□□□□□ -0.32
TPM1-230ENST00000561266 CHSY3Q70JA7 882 aa13.04□□□□□ -0.32
TPM1-230ENST00000561266 CLNKQ7Z7G1 428 aa13.04□□□□□ -0.32
TPM1-230ENST00000561266 SLC22A9Q8IVM8 553 aa13.04□□□□□ -0.32
TPM1-230ENST00000561266 SIRT6Q8N6T7 355 aa13.04□□□□□ -0.32
TPM1-230ENST00000561266 CCNYL1Q8N7R7 359 aa13.04□□□□□ -0.32
TPM1-230ENST00000561266 Q8NA96 180 aa13.04□□□□□ -0.32
TPM1-230ENST00000561266 BRIX1Q8TDN6 353 aaKnown RBP13.04□□□□□ -0.32
TPM1-230ENST00000561266 METTL21AQ8WXB1 218 aa13.04□□□□□ -0.32
TPM1-230ENST00000561266 RGMAQ96B86 450 aa13.04□□□□□ -0.32
TPM1-230ENST00000561266 APOPT1Q96IL0 206 aa13.04□□□□□ -0.32
TPM1-230ENST00000561266 FAM111AQ96PZ2 611 aa13.04□□□□□ -0.32
TPM1-230ENST00000561266 ZNF382Q96SR6 550 aa13.04□□□□□ -0.32
TPM1-230ENST00000561266 NPAS2Q99743 824 aa13.04□□□□□ -0.32
TPM1-230ENST00000561266 MECRQ9BV79 373 aa13.04□□□□□ -0.32
TPM1-230ENST00000561266 SHCBP1LQ9BZQ2 653 aa13.04□□□□□ -0.32
TPM1-230ENST00000561266 LHPPQ9H008 270 aa13.04□□□□□ -0.32
TPM1-230ENST00000561266 OXSMQ9NWU1 459 aa13.04□□□□□ -0.32
TPM1-230ENST00000561266 LUZP4Q9P127 313 aa13.04□□□□□ -0.32
TPM1-230ENST00000561266 ADGRE2Q9UHX3 823 aa13.04□□□□□ -0.32
TPM1-230ENST00000561266 FBXW2Q9UKT8 454 aa13.04□□□□□ -0.32
TPM1-230ENST00000561266 ATG4BQ9Y4P1 393 aa13.04□□□□□ -0.32
TPM1-230ENST00000561266 TIMM22Q9Y584 194 aa13.04□□□□□ -0.32
TPM1-230ENST00000561266 SHANK1Q9Y566 2161 aa13.04□□□□□ -0.32
TPM1-230ENST00000561266 A0A0A6YYD5 115 aa13.03□□□□□ -0.32
TPM1-230ENST00000561266 TCRBV16S1A1N1A0A5B0 115 aa13.03□□□□□ -0.32
TPM1-230ENST00000561266 MANBAO00462 879 aa13.03□□□□□ -0.32
TPM1-230ENST00000561266 TYROBPO43914 113 aa13.03□□□□□ -0.32
TPM1-230ENST00000561266 LDB3O75112 727 aa13.03□□□□□ -0.32
TPM1-230ENST00000561266 PTX3P26022 381 aaPredicted RBP13.03□□□□□ -0.32
TPM1-230ENST00000561266 SERPINB1P30740 379 aa13.03□□□□□ -0.32
TPM1-230ENST00000561266 ALDH3A1P30838 453 aa13.03□□□□□ -0.32
TPM1-230ENST00000561266 ARRB2P32121 409 aa13.03□□□□□ -0.32
TPM1-230ENST00000561266 SSR2P43308 183 aa13.03□□□□□ -0.32
TPM1-230ENST00000561266 OR4D2P58180 307 aa13.03□□□□□ -0.32
TPM1-230ENST00000561266 DNAJB13P59910 316 aa13.03□□□□□ -0.32
TPM1-230ENST00000561266 SKP1P63208 163 aa13.03□□□□□ -0.32
TPM1-230ENST00000561266 ID2Q02363 134 aa13.03□□□□□ -0.32
TPM1-230ENST00000561266 SLAMF1Q13291 335 aa13.03□□□□□ -0.32
TPM1-230ENST00000561266 CUL3Q13618 768 aa13.03□□□□□ -0.32
TPM1-230ENST00000561266 AP5B1Q2VPB7 878 aa13.03□□□□□ -0.32
TPM1-230ENST00000561266 KRT71Q3SY84 523 aa13.03□□□□□ -0.32
TPM1-230ENST00000561266 CCDC153Q494R4 210 aa13.03□□□□□ -0.32
TPM1-230ENST00000561266 BEND6Q5SZJ8 279 aaPredicted RBP13.03□□□□□ -0.32
TPM1-230ENST00000561266 VWA5B1Q5TIE3 1220 aa13.03□□□□□ -0.32
TPM1-230ENST00000561266 CES4AQ5XG92 561 aa13.03□□□□□ -0.32
TPM1-230ENST00000561266 FCRLBQ6BAA4 426 aa13.03□□□□□ -0.32
TPM1-230ENST00000561266 RIPOR1Q6ZS17 1223 aa13.03□□□□□ -0.32
TPM1-230ENST00000561266 GPRIN3Q6ZVF9 776 aa13.03□□□□□ -0.32
TPM1-230ENST00000561266 EXOC3L1Q86VI1 746 aa13.03□□□□□ -0.32
TPM1-230ENST00000561266 OR4N5Q8IXE1 308 aa13.03□□□□□ -0.32
TPM1-230ENST00000561266 KIF2BQ8N4N8 673 aa13.03□□□□□ -0.32
TPM1-230ENST00000561266 NFAM1Q8NET5 270 aaPredicted RBP13.03□□□□□ -0.32
TPM1-230ENST00000561266 TCP10LQ8TDR4 215 aa13.03□□□□□ -0.32
TPM1-230ENST00000561266 PPP4R1Q8TF05 950 aa13.03□□□□□ -0.32
TPM1-230ENST00000561266 AGAP11Q8TF27 550 aa13.03□□□□□ -0.32
TPM1-230ENST00000561266 ANKRD9Q96BM1 317 aaPredicted RBP13.03□□□□□ -0.32
TPM1-230ENST00000561266 GATA5Q9BWX5 397 aaPredicted RBP13.03□□□□□ -0.32
TPM1-230ENST00000561266 MRPL1Q9BYD6 325 aaKnown RBP13.03□□□□□ -0.32
TPM1-230ENST00000561266 TRIM4Q9C037 500 aa13.03□□□□□ -0.32
TPM1-230ENST00000561266 DDX31Q9H8H2 851 aaKnown RBP13.03□□□□□ -0.32
TPM1-230ENST00000561266 COPS7BQ9H9Q2 264 aaPredicted RBP13.03□□□□□ -0.32
TPM1-230ENST00000561266 LYRM4Q9HD34 91 aa13.03□□□□□ -0.32
TPM1-230ENST00000561266 PRDM9Q9NQV7 894 aa13.03□□□□□ -0.32
TPM1-230ENST00000561266 PRTFDC1Q9NRG1 225 aa13.03□□□□□ -0.32
TPM1-230ENST00000561266 PSD3Q9NYI0 1048 aa13.03□□□□□ -0.32
TPM1-230ENST00000561266 TRPS1Q9UHF7 1281 aa13.03□□□□□ -0.32
TPM1-230ENST00000561266 ZNF451Q9Y4E5 1061 aa13.03□□□□□ -0.32
TPM1-230ENST00000561266 ASB4Q9Y574 426 aa13.03□□□□□ -0.32
TPM1-230ENST00000561266 NBASA2RRP1 2371 aa13.03□□□□□ -0.32
TPM1-230ENST00000561266 CROCCQ5TZA2 2017 aa13.03□□□□□ -0.32
TPM1-230ENST00000561266 A0A1W2PR48 441 aa13.02□□□□□ -0.33
TPM1-230ENST00000561266 A0A1W2PS29 197 aa13.02□□□□□ -0.33
TPM1-230ENST00000561266 ARHGAP10A1A4S6 786 aa13.02□□□□□ -0.33
TPM1-230ENST00000561266 PSMD12O00232 456 aaPredicted RBP13.02□□□□□ -0.33
TPM1-230ENST00000561266 SERPINA7P05543 415 aa13.02□□□□□ -0.33
TPM1-230ENST00000561266 CYC1P08574 325 aa13.02□□□□□ -0.33
TPM1-230ENST00000561266 PLA2G2AP14555 144 aa13.02□□□□□ -0.33
TPM1-230ENST00000561266 JAK1P23458 1154 aa13.02□□□□□ -0.33
TPM1-230ENST00000561266 TPP2P29144 1249 aaPredicted RBP13.02□□□□□ -0.33
TPM1-230ENST00000561266 SERPINB3P29508 390 aa13.02□□□□□ -0.33
TPM1-230ENST00000561266 SOX11P35716 441 aa13.02□□□□□ -0.33
TPM1-230ENST00000561266 RAP1GDS1P52306 607 aa13.02□□□□□ -0.33
TPM1-230ENST00000561266 GALNT1Q10472 559 aaPredicted RBP13.02□□□□□ -0.33
TPM1-230ENST00000561266 TBL3Q12788 808 aaKnown RBP13.02□□□□□ -0.33
TPM1-230ENST00000561266 MPP2Q14168 576 aa13.02□□□□□ -0.33
TPM1-230ENST00000561266 BTBD16Q32M84 506 aa13.02□□□□□ -0.33
TPM1-230ENST00000561266 PLEKHN1Q494U1 663 aaPredicted RBP13.02□□□□□ -0.33
TPM1-230ENST00000561266 CEP85LQ5SZL2 805 aa13.02□□□□□ -0.33
TPM1-230ENST00000561266 PLAG1Q6DJT9 500 aa13.02□□□□□ -0.33
TPM1-230ENST00000561266 TTC19Q6DKK2 380 aaPredicted RBP13.02□□□□□ -0.33
TPM1-230ENST00000561266 IGFL2Q6UWQ7 119 aa13.02□□□□□ -0.33
TPM1-230ENST00000561266 LINC00696Q6ZRV3 163 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms