RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 PHF12Q96QT6 1004 aa15.11■□□□□ 0.01
SNX1-213ENST00000561026 PRDM7Q9NQW5 492 aa15.11■□□□□ 0.01
SNX1-213ENST00000561026 GRHL1Q9NZI5 618 aa15.11■□□□□ 0.01
SNX1-213ENST00000561026 DAPP1Q9UN19 280 aa15.11■□□□□ 0.01
SNX1-213ENST00000561026 ASB1Q9Y576 335 aa15.11■□□□□ 0.01
SNX1-213ENST00000561026 ADGRG4Q8IZF6 3080 aa15.11■□□□□ 0.01
SNX1-213ENST00000561026 SYNDIG1LA6NDD5 238 aa15.11■□□□□ 0.01
SNX1-213ENST00000561026 ZNHIT1O43257 154 aa15.11■□□□□ 0.01
SNX1-213ENST00000561026 CTNSO60931 367 aa15.11■□□□□ 0.01
SNX1-213ENST00000561026 ZFAND5O76080 213 aa15.11■□□□□ 0.01
SNX1-213ENST00000561026 EPORP19235 508 aa15.11■□□□□ 0.01
SNX1-213ENST00000561026 TFEBP19484 476 aa15.11■□□□□ 0.01
SNX1-213ENST00000561026 CERS1P27544 350 aa15.11■□□□□ 0.01
SNX1-213ENST00000561026 MEOX1P50221 254 aa15.11■□□□□ 0.01
SNX1-213ENST00000561026 RAB10P61026 200 aa15.11■□□□□ 0.01
SNX1-213ENST00000561026 TGM3Q08188 693 aa15.11■□□□□ 0.01
SNX1-213ENST00000561026 GTF3C1Q12789 2109 aa15.11■□□□□ 0.01
SNX1-213ENST00000561026 LAPTM5Q13571 262 aa15.11■□□□□ 0.01
SNX1-213ENST00000561026 RCN2Q14257 317 aa15.11■□□□□ 0.01
SNX1-213ENST00000561026 EFTUD2Q15029 972 aaKnown RBP eCLIP15.11■□□□□ 0.017e-14■■■■■ 31
SNX1-213ENST00000561026 PAGE2BQ5JRK9 111 aa15.11■□□□□ 0.01
SNX1-213ENST00000561026 MDGA2Q7Z553 956 aa15.11■□□□□ 0.01
SNX1-213ENST00000561026 FGD2Q7Z6J4 655 aa15.11■□□□□ 0.01
SNX1-213ENST00000561026 CLNKQ7Z7G1 428 aa15.11■□□□□ 0.01
SNX1-213ENST00000561026 DOLPP1Q86YN1 238 aa15.11■□□□□ 0.01
SNX1-213ENST00000561026 CYP4Z2PQ8N1L4 340 aa15.11■□□□□ 0.01
SNX1-213ENST00000561026 AGAP11Q8TF27 550 aa15.11■□□□□ 0.01
SNX1-213ENST00000561026 ANP32BQ92688 251 aaKnown RBP15.11■□□□□ 0.01
SNX1-213ENST00000561026 F2RL3Q96RI0 385 aa15.11■□□□□ 0.01
SNX1-213ENST00000561026 CCDC77Q9BR77 488 aa15.11■□□□□ 0.01
SNX1-213ENST00000561026 CD244Q9BZW8 370 aa15.11■□□□□ 0.01
SNX1-213ENST00000561026 ADAP2Q9NPF8 381 aa15.11■□□□□ 0.01
SNX1-213ENST00000561026 KCMF1Q9P0J7 381 aa15.11■□□□□ 0.01
SNX1-213ENST00000561026 RNF112Q9ULX5 631 aa15.11■□□□□ 0.01
SNX1-213ENST00000561026 YARS2Q9Y2Z4 477 aaKnown RBP15.11■□□□□ 0.01
SNX1-213ENST00000561026 NCOA6Q14686 2063 aaPredicted RBP15.1■□□□□ 0.01
SNX1-213ENST00000561026 DCHS2Q6V1P9 2916 aa15.1■□□□□ 0.01
SNX1-213ENST00000561026 PEX1O43933 1283 aa15.1■□□□□ 0.01
SNX1-213ENST00000561026 CCNT2O60583 730 aaKnown RBP15.1■□□□□ 0.01
SNX1-213ENST00000561026 PTGER1P34995 402 aa15.1■□□□□ 0.01
SNX1-213ENST00000561026 SPRP35270 261 aaPredicted RBP15.1■□□□□ 0.01
SNX1-213ENST00000561026 PTGER4P35408 488 aa15.1■□□□□ 0.01
SNX1-213ENST00000561026 CASP2P42575 452 aa15.1■□□□□ 0.01
SNX1-213ENST00000561026 IRF8Q02556 426 aa15.1■□□□□ 0.01
SNX1-213ENST00000561026 CHIT1Q13231 466 aa15.1■□□□□ 0.01
SNX1-213ENST00000561026 E2F2Q14209 437 aa15.1■□□□□ 0.01
SNX1-213ENST00000561026 CDSNQ15517 529 aa15.1■□□□□ 0.01
SNX1-213ENST00000561026 ELAVL1Q15717 326 aaKnown RBP15.1■□□□□ 0.01
SNX1-213ENST00000561026 TBCCQ15814 346 aa15.1■□□□□ 0.01
SNX1-213ENST00000561026 HIST2H2ACQ16777 129 aaPredicted RBP15.1■□□□□ 0.01
SNX1-213ENST00000561026 GRTP1Q5TC63 336 aa15.1■□□□□ 0.01
SNX1-213ENST00000561026 HIST2H2AA3Q6FI13 130 aa15.1■□□□□ 0.01
SNX1-213ENST00000561026 UBE3DQ7Z6J8 389 aa15.1■□□□□ 0.01
SNX1-213ENST00000561026 ISCA2Q86U28 154 aa15.1■□□□□ 0.01
SNX1-213ENST00000561026 CTAGE3PQ8IX95 158 aa15.1■□□□□ 0.01
SNX1-213ENST00000561026 TMEM132CQ8N3T6 1108 aa15.1■□□□□ 0.01
SNX1-213ENST00000561026 ZFP62Q8NB50 900 aaPredicted RBP15.1■□□□□ 0.01
SNX1-213ENST00000561026 C16orf52Q8NHV5 167 aa15.1■□□□□ 0.01
SNX1-213ENST00000561026 STAG3L4Q8TBR4 150 aa15.1■□□□□ 0.01
SNX1-213ENST00000561026 KCNC2Q96PR1 638 aa15.1■□□□□ 0.01
SNX1-213ENST00000561026 CSF3RQ99062 836 aa15.1■□□□□ 0.01
SNX1-213ENST00000561026 COPS7BQ9H9Q2 264 aaPredicted RBP15.1■□□□□ 0.01
SNX1-213ENST00000561026 VTI1BQ9UEU0 232 aa15.1■□□□□ 0.01
SNX1-213ENST00000561026 CLCA3PQ9Y6N3 262 aa15.1■□□□□ 0.01
SNX1-213ENST00000561026 CSMD2Q7Z408 3487 aa15.1■□□□□ 0.01
SNX1-213ENST00000561026 TMEM200CA6NKL6 621 aa15.09■□□□□ 0.01
SNX1-213ENST00000561026 E9PLN8 166 aa15.09■□□□□ 0.01
SNX1-213ENST00000561026 PRRG2O14669 202 aa15.09■□□□□ 0.01
SNX1-213ENST00000561026 ADAM10O14672 748 aa15.09■□□□□ 0.01
SNX1-213ENST00000561026 TFECO14948 347 aaPredicted RBP15.09■□□□□ 0.01
SNX1-213ENST00000561026 PRKNO60260 465 aaPredicted RBP15.09■□□□□ 0.01
SNX1-213ENST00000561026 FAM155BO75949 473 aa15.09■□□□□ 0.01
SNX1-213ENST00000561026 CLDN14O95500 239 aa15.09■□□□□ 0.01
SNX1-213ENST00000561026 S100BP04271 92 aaPredicted RBP15.09■□□□□ 0.01
SNX1-213ENST00000561026 IFNA16P05015 189 aa15.09■□□□□ 0.01
SNX1-213ENST00000561026 COX6B1P14854 86 aa15.09■□□□□ 0.01
SNX1-213ENST00000561026 GMPRP36959 345 aa15.09■□□□□ 0.01
SNX1-213ENST00000561026 RFC3P40938 356 aa15.09■□□□□ 0.01
SNX1-213ENST00000561026 SSR4P51571 173 aa15.09■□□□□ 0.01
SNX1-213ENST00000561026 PLTPP55058 493 aa15.09■□□□□ 0.01
SNX1-213ENST00000561026 C2orf54Q08AI8 447 aa15.09■□□□□ 0.01
SNX1-213ENST00000561026 BMPR2Q13873 1038 aa15.09■□□□□ 0.01
SNX1-213ENST00000561026 KBTBD12Q3ZCT8 623 aa15.09■□□□□ 0.01
SNX1-213ENST00000561026 C16orf47Q6ZP98 133 aaPredicted RBP15.09■□□□□ 0.01
SNX1-213ENST00000561026 LRRC70Q7Z2Q7 622 aa15.09■□□□□ 0.01
SNX1-213ENST00000561026 SRFBP1Q8NEF9 429 aaKnown RBP15.09■□□□□ 0.01
SNX1-213ENST00000561026 PHF10Q8WUB8 498 aaKnown RBP15.09■□□□□ 0.01
SNX1-213ENST00000561026 PTPMT1Q8WUK0 201 aaPredicted RBP15.09■□□□□ 0.01
SNX1-213ENST00000561026 DAZLQ92904 295 aaKnown RBP15.09■□□□□ 0.01
SNX1-213ENST00000561026 VKORC1Q9BQB6 163 aa15.09■□□□□ 0.01
SNX1-213ENST00000561026 TBCDQ9BTW9 1192 aa15.09■□□□□ 0.01
SNX1-213ENST00000561026 ALOXE3Q9BYJ1 711 aa15.09■□□□□ 0.01
SNX1-213ENST00000561026 PHACTR1Q9C0D0 580 aa15.09■□□□□ 0.01
SNX1-213ENST00000561026 ROGDIQ9GZN7 287 aa15.09■□□□□ 0.01
SNX1-213ENST00000561026 ALG9Q9H6U8 611 aa15.09■□□□□ 0.01
SNX1-213ENST00000561026 LYRM4Q9HD34 91 aa15.09■□□□□ 0.01
SNX1-213ENST00000561026 MYOTQ9UBF9 498 aa15.09■□□□□ 0.01
SNX1-213ENST00000561026 UTP11Q9Y3A2 253 aaKnown RBP15.09■□□□□ 0.01
SNX1-213ENST00000561026 A0A1B0GTH9 108 aa15.08■□□□□ 0
SNX1-213ENST00000561026 HS6ST1O60243 411 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms