RNA–Protein interactions for RNA: ENST00000560637.5

VPS13C-209, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 1 (best)

Gene VPS13C, Length 3,684 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-209ENST00000560637 STARD6P59095 220 aa5.19□□□□□ -1.58
VPS13C-209ENST00000560637 CCL7P80098 99 aa5.19□□□□□ -1.58
VPS13C-209ENST00000560637 FOXK1P85037 733 aa5.19□□□□□ -1.58
VPS13C-209ENST00000560637 GANABQ14697 944 aaKnown RBP5.19□□□□□ -1.58
VPS13C-209ENST00000560637 EXOSC7Q15024 291 aaKnown RBP5.19□□□□□ -1.58
VPS13C-209ENST00000560637 SLC14A2Q15849 920 aa5.19□□□□□ -1.58
VPS13C-209ENST00000560637 SPIN4Q56A73 249 aa5.19□□□□□ -1.58
VPS13C-209ENST00000560637 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.19□□□□□ -1.58
VPS13C-209ENST00000560637 LIPJQ5W064 366 aa5.19□□□□□ -1.58
VPS13C-209ENST00000560637 FCRLBQ6BAA4 426 aa5.19□□□□□ -1.58
VPS13C-209ENST00000560637 CEACAM20Q6UY09 585 aa5.19□□□□□ -1.58
VPS13C-209ENST00000560637 CYHR1Q6ZMK1 362 aa5.19□□□□□ -1.58
VPS13C-209ENST00000560637 LSMEM2Q8N112 164 aa5.19□□□□□ -1.58
VPS13C-209ENST00000560637 AGBL5Q8NDL9 886 aa5.19□□□□□ -1.58
VPS13C-209ENST00000560637 HCAR2Q8TDS4 363 aa5.19□□□□□ -1.58
VPS13C-209ENST00000560637 SLC35G5Q96KT7 338 aa5.19□□□□□ -1.58
VPS13C-209ENST00000560637 GPR78Q96P69 363 aa5.19□□□□□ -1.58
VPS13C-209ENST00000560637 KCNC2Q96PR1 638 aa5.19□□□□□ -1.58
VPS13C-209ENST00000560637 NRSN2Q9GZP1 204 aa5.19□□□□□ -1.58
VPS13C-209ENST00000560637 SEMA3GQ9NS98 782 aa5.19□□□□□ -1.58
VPS13C-209ENST00000560637 TEX10Q9NXF1 929 aaPredicted RBP5.19□□□□□ -1.58
VPS13C-209ENST00000560637 GPRC5BQ9NZH0 403 aa5.19□□□□□ -1.58
VPS13C-209ENST00000560637 SLAMF8Q9P0V8 285 aa5.19□□□□□ -1.58
VPS13C-209ENST00000560637 GMPR2Q9P2T1 348 aaKnown RBP5.19□□□□□ -1.58
VPS13C-209ENST00000560637 MED16Q9Y2X0 877 aa5.19□□□□□ -1.58
VPS13C-209ENST00000560637 MED12Q93074 2177 aa5.19□□□□□ -1.58
VPS13C-209ENST00000560637 OTOGLQ3ZCN5 2332 aa5.18□□□□□ -1.58
VPS13C-209ENST00000560637 HYKKA2RU49 373 aa5.18□□□□□ -1.58
VPS13C-209ENST00000560637 OR5K3A6NET4 321 aa5.18□□□□□ -1.58
VPS13C-209ENST00000560637 PEX12O00623 359 aa5.18□□□□□ -1.58
VPS13C-209ENST00000560637 SCO2O43819 266 aa5.18□□□□□ -1.58
VPS13C-209ENST00000560637 CSF2P04141 144 aa5.18□□□□□ -1.58
VPS13C-209ENST00000560637 SPINK2P20155 84 aa5.18□□□□□ -1.58
VPS13C-209ENST00000560637 TRIM23P36406 574 aa5.18□□□□□ -1.58
VPS13C-209ENST00000560637 OR1E2P47887 323 aa5.18□□□□□ -1.58
VPS13C-209ENST00000560637 MTTPP55157 894 aa5.18□□□□□ -1.58
VPS13C-209ENST00000560637 KIAA1024LP59773 190 aa5.18□□□□□ -1.58
VPS13C-209ENST00000560637 DNAJB13P59910 316 aa5.18□□□□□ -1.58
VPS13C-209ENST00000560637 COPZ1P61923 177 aa5.18□□□□□ -1.58
VPS13C-209ENST00000560637 RPS7P62081 194 aaKnown RBP5.18□□□□□ -1.58
VPS13C-209ENST00000560637 KIR2DS3Q14952 304 aa5.18□□□□□ -1.58
VPS13C-209ENST00000560637 BTBD16Q32M84 506 aa5.18□□□□□ -1.58
VPS13C-209ENST00000560637 ANXA8L1Q5VT79 327 aa5.18□□□□□ -1.58
VPS13C-209ENST00000560637 OR4C11Q6IEV9 310 aa5.18□□□□□ -1.58
VPS13C-209ENST00000560637 KRT73Q86Y46 540 aa5.18□□□□□ -1.58
VPS13C-209ENST00000560637 DCP2Q8IU60 420 aaKnown RBP5.18□□□□□ -1.58
VPS13C-209ENST00000560637 ARL10Q8N8L6 244 aa5.18□□□□□ -1.58
VPS13C-209ENST00000560637 C19orf47Q8N9M1 422 aaKnown RBP5.18□□□□□ -1.58
VPS13C-209ENST00000560637 PDPRQ8NCN5 879 aa5.18□□□□□ -1.58
VPS13C-209ENST00000560637 OR4K14Q8NGD5 310 aa5.18□□□□□ -1.58
VPS13C-209ENST00000560637 KIAA1143Q96AT1 154 aaPredicted RBP5.18□□□□□ -1.58
VPS13C-209ENST00000560637 MIEF2Q96C03 454 aa5.18□□□□□ -1.58
VPS13C-209ENST00000560637 ARHGAP9Q9BRR9 750 aa5.18□□□□□ -1.58
VPS13C-209ENST00000560637 INPP5KQ9BT40 448 aa5.18□□□□□ -1.58
VPS13C-209ENST00000560637 ZNF556Q9HAH1 456 aa5.18□□□□□ -1.58
VPS13C-209ENST00000560637 TMEM184CQ9NVA4 438 aa5.18□□□□□ -1.58
VPS13C-209ENST00000560637 RHCGQ9UBD6 479 aa5.18□□□□□ -1.58
VPS13C-209ENST00000560637 STOML1Q9UBI4 398 aa5.18□□□□□ -1.58
VPS13C-209ENST00000560637 MKLN1Q9UL63 735 aa5.18□□□□□ -1.58
VPS13C-209ENST00000560637 TMCC3Q9ULS5 477 aa5.18□□□□□ -1.58
VPS13C-209ENST00000560637 SLC17A4Q9Y2C5 497 aa5.18□□□□□ -1.58
VPS13C-209ENST00000560637 BTBD3Q9Y2F9 522 aa5.18□□□□□ -1.58
VPS13C-209ENST00000560637 SCN2AQ99250 2005 aa5.18□□□□□ -1.58
VPS13C-209ENST00000560637 TRBV5-4A0A0C4DH59 114 aa5.18□□□□□ -1.58
VPS13C-209ENST00000560637 CFAP73A6NFT4 308 aa5.18□□□□□ -1.58
VPS13C-209ENST00000560637 ZNF749O43361 778 aa5.18□□□□□ -1.58
VPS13C-209ENST00000560637 ALOX12BO75342 701 aa5.18□□□□□ -1.58
VPS13C-209ENST00000560637 PSIP1O75475 530 aaKnown RBP5.18□□□□□ -1.58
VPS13C-209ENST00000560637 SOD1P00441 154 aa5.18□□□□□ -1.58
VPS13C-209ENST00000560637 RNH1P13489 461 aaKnown RBP5.18□□□□□ -1.58
VPS13C-209ENST00000560637 NME1P15531 152 aaKnown RBP5.18□□□□□ -1.58
VPS13C-209ENST00000560637 XRCC1P18887 633 aaPredicted RBP5.18□□□□□ -1.58
VPS13C-209ENST00000560637 VAMP1P23763 118 aa5.18□□□□□ -1.58
VPS13C-209ENST00000560637 IL12BP29460 328 aa5.18□□□□□ -1.58
VPS13C-209ENST00000560637 NOS3P29474 1203 aa5.18□□□□□ -1.58
VPS13C-209ENST00000560637 IDH2P48735 452 aaKnown RBP5.18□□□□□ -1.58
VPS13C-209ENST00000560637 OR4D2P58180 307 aa5.18□□□□□ -1.58
VPS13C-209ENST00000560637 NXPH1P58417 271 aa5.18□□□□□ -1.58
VPS13C-209ENST00000560637 RPS15AP62244 130 aaKnown RBP5.18□□□□□ -1.58
VPS13C-209ENST00000560637 CSNK1G2P78368 415 aa5.18□□□□□ -1.58
VPS13C-209ENST00000560637 PRR5P85299 388 aa5.18□□□□□ -1.58
VPS13C-209ENST00000560637 EEF1A2Q05639 463 aaKnown RBP5.18□□□□□ -1.58
VPS13C-209ENST00000560637 BCL7AQ4VC05 210 aa5.18□□□□□ -1.58
VPS13C-209ENST00000560637 C6orf132Q5T0Z8 1188 aa5.18□□□□□ -1.58
VPS13C-209ENST00000560637 CCNJQ5T5M9 372 aa5.18□□□□□ -1.58
VPS13C-209ENST00000560637 DEPDC1Q5TB30 811 aa5.18□□□□□ -1.58
VPS13C-209ENST00000560637 CYB5D1Q6P9G0 228 aa5.18□□□□□ -1.58
VPS13C-209ENST00000560637 SLCO4C1Q6ZQN7 724 aa5.18□□□□□ -1.58
VPS13C-209ENST00000560637 CLEC14AQ86T13 490 aa5.18□□□□□ -1.58
VPS13C-209ENST00000560637 NLGN4YQ8NFZ3 816 aaPredicted RBP5.18□□□□□ -1.58
VPS13C-209ENST00000560637 OR5D16Q8NGK9 328 aa5.18□□□□□ -1.58
VPS13C-209ENST00000560637 OR9A2Q8NGT5 310 aa5.18□□□□□ -1.58
VPS13C-209ENST00000560637 OR6Y1Q8NGX8 325 aa5.18□□□□□ -1.58
VPS13C-209ENST00000560637 OR2T11Q8NH01 316 aa5.18□□□□□ -1.58
VPS13C-209ENST00000560637 GRHL3Q8TE85 626 aa5.18□□□□□ -1.58
VPS13C-209ENST00000560637 ZDHHC19Q8WVZ1 309 aaPredicted RBP5.18□□□□□ -1.58
VPS13C-209ENST00000560637 PLEKHA8Q96JA3 519 aa5.18□□□□□ -1.58
VPS13C-209ENST00000560637 OR4K3Q96R72 315 aa5.18□□□□□ -1.58
VPS13C-209ENST00000560637 CCDC28BQ9BUN5 200 aa5.18□□□□□ -1.58
VPS13C-209ENST00000560637 SLC29A3Q9BZD2 475 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms