RNA–Protein interactions for RNA: ENST00000559898.5

HDDC3-205, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,024 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-205ENST00000559898 TINAGQ9UJW2 476 aa16.54■□□□□ 0.24
HDDC3-205ENST00000559898 NPIPA1Q9UND3 350 aa16.54■□□□□ 0.24
HDDC3-205ENST00000559898 MMACHCQ9Y4U1 282 aa16.54■□□□□ 0.24
HDDC3-205ENST00000559898 CENPEQ02224 2701 aa16.54■□□□□ 0.24
HDDC3-205ENST00000559898 ZNF354AO60765 605 aaPredicted RBP16.53■□□□□ 0.24
HDDC3-205ENST00000559898 SLC25A12O75746 678 aa16.53■□□□□ 0.24
HDDC3-205ENST00000559898 URI1O94763 535 aaPredicted RBP16.53■□□□□ 0.24
HDDC3-205ENST00000559898 EEF1DP29692 281 aaKnown RBP16.53■□□□□ 0.24
HDDC3-205ENST00000559898 SLC13A2Q13183 592 aa16.53■□□□□ 0.24
HDDC3-205ENST00000559898 UAP1Q16222 522 aaPredicted RBP16.53■□□□□ 0.24
HDDC3-205ENST00000559898 TRIM40Q6P9F5 258 aa16.53■□□□□ 0.24
HDDC3-205ENST00000559898 DGAT2L6Q6ZPD8 337 aa16.53■□□□□ 0.24
HDDC3-205ENST00000559898 LRRC70Q7Z2Q7 622 aa16.53■□□□□ 0.24
HDDC3-205ENST00000559898 MDGA2Q7Z553 956 aa16.53■□□□□ 0.24
HDDC3-205ENST00000559898 B3GNT7Q8NFL0 401 aa16.53■□□□□ 0.24
HDDC3-205ENST00000559898 STAG3L4Q8TBR4 150 aa16.53■□□□□ 0.24
HDDC3-205ENST00000559898 UBTD2Q8WUN7 234 aa16.53■□□□□ 0.24
HDDC3-205ENST00000559898 ITLN2Q8WWU7 325 aaPredicted RBP16.53■□□□□ 0.24
HDDC3-205ENST00000559898 UCN3Q969E3 161 aa16.53■□□□□ 0.24
HDDC3-205ENST00000559898 SERINC2Q96SA4 455 aa16.53■□□□□ 0.24
HDDC3-205ENST00000559898 EFCAB11Q9BUY7 163 aa16.53■□□□□ 0.24
HDDC3-205ENST00000559898 CAPS2Q9BXY5 557 aa16.53■□□□□ 0.24
HDDC3-205ENST00000559898 DEFB126Q9BYW3 111 aa16.53■□□□□ 0.24
HDDC3-205ENST00000559898 OR51B5Q9H339 312 aa16.53■□□□□ 0.24
HDDC3-205ENST00000559898 FBXW2Q9UKT8 454 aa16.53■□□□□ 0.24
HDDC3-205ENST00000559898 PCDHGB6Q9Y5F9 930 aa16.53■□□□□ 0.24
HDDC3-205ENST00000559898 GTF3C1Q12789 2109 aa16.52■□□□□ 0.24
HDDC3-205ENST00000559898 NCOA6Q14686 2063 aaPredicted RBP16.52■□□□□ 0.24
HDDC3-205ENST00000559898 WASHC1A8K0Z3 465 aa16.52■□□□□ 0.24
HDDC3-205ENST00000559898 K7EPI3 171 aa16.52■□□□□ 0.24
HDDC3-205ENST00000559898 CCL21O00585 134 aa16.52■□□□□ 0.24
HDDC3-205ENST00000559898 NME2P1O60361 137 aa16.52■□□□□ 0.24
HDDC3-205ENST00000559898 SIX3O95343 332 aaPredicted RBP16.52■□□□□ 0.24
HDDC3-205ENST00000559898 ALDOAP04075 364 aaKnown RBP16.52■□□□□ 0.24
HDDC3-205ENST00000559898 S100BP04271 92 aaPredicted RBP16.52■□□□□ 0.24
HDDC3-205ENST00000559898 PRF1P14222 555 aa16.52■□□□□ 0.24
HDDC3-205ENST00000559898 CD46P15529 392 aa16.52■□□□□ 0.24
HDDC3-205ENST00000559898 NME2P22392 152 aa16.52■□□□□ 0.24
HDDC3-205ENST00000559898 ATP5A1P25705 553 aaKnown RBP16.52■□□□□ 0.24
HDDC3-205ENST00000559898 CRABP2P29373 138 aa16.52■□□□□ 0.24
HDDC3-205ENST00000559898 ECHS1P30084 290 aa16.52■□□□□ 0.24
HDDC3-205ENST00000559898 CASP2P42575 452 aa16.52■□□□□ 0.24
HDDC3-205ENST00000559898 CA7P43166 264 aa16.52■□□□□ 0.24
HDDC3-205ENST00000559898 MTTPP55157 894 aa16.52■□□□□ 0.24
HDDC3-205ENST00000559898 HSD17B7P56937 341 aa16.52■□□□□ 0.24
HDDC3-205ENST00000559898 ADORA2A-AS1P86434 159 aa16.52■□□□□ 0.24
HDDC3-205ENST00000559898 ALDH6A1Q02252 535 aaKnown RBP16.52■□□□□ 0.24
HDDC3-205ENST00000559898 DDX39BQ13838 428 aaKnown RBP16.52■□□□□ 0.24
HDDC3-205ENST00000559898 TBCCQ15814 346 aa16.52■□□□□ 0.24
HDDC3-205ENST00000559898 TBC1D1Q86TI0 1168 aaPredicted RBP16.52■□□□□ 0.24
HDDC3-205ENST00000559898 OR4N5Q8IXE1 308 aa16.52■□□□□ 0.24
HDDC3-205ENST00000559898 LAS2Q8IYD9 372 aa16.52■□□□□ 0.24
HDDC3-205ENST00000559898 LGI4Q8N135 537 aa16.52■□□□□ 0.24
HDDC3-205ENST00000559898 ARMC10Q8N2F6 343 aa16.52■□□□□ 0.24
HDDC3-205ENST00000559898 TEX9Q8N6V9 391 aa16.52■□□□□ 0.24
HDDC3-205ENST00000559898 OR7G3Q8NG95 312 aa16.52■□□□□ 0.24
HDDC3-205ENST00000559898 PTPMT1Q8WUK0 201 aaPredicted RBP16.52■□□□□ 0.24
HDDC3-205ENST00000559898 ANKRD9Q96BM1 317 aaPredicted RBP16.52■□□□□ 0.24
HDDC3-205ENST00000559898 GPR137Q96N19 417 aa16.52■□□□□ 0.24
HDDC3-205ENST00000559898 NMRAL1Q9HBL8 299 aa16.52■□□□□ 0.24
HDDC3-205ENST00000559898 ACOT9Q9Y305 439 aa16.52■□□□□ 0.24
HDDC3-205ENST00000559898 A0A1B0GUH1 482 aa16.51■□□□□ 0.23
HDDC3-205ENST00000559898 PINLYPA6NC86 204 aa16.51■□□□□ 0.23
HDDC3-205ENST00000559898 TRHRP34981 398 aaPredicted RBP16.51■□□□□ 0.23
HDDC3-205ENST00000559898 PTGER1P34995 402 aa16.51■□□□□ 0.23
HDDC3-205ENST00000559898 PIK3CGP48736 1102 aa16.51■□□□□ 0.23
HDDC3-205ENST00000559898 HLCSP50747 726 aa16.51■□□□□ 0.23
HDDC3-205ENST00000559898 CLCN2P51788 898 aa16.51■□□□□ 0.23
HDDC3-205ENST00000559898 GPR85P60893 370 aa16.51■□□□□ 0.23
HDDC3-205ENST00000559898 PFKFB4Q16877 469 aa16.51■□□□□ 0.23
HDDC3-205ENST00000559898 C3P1Q6ZMU1 363 aa16.51■□□□□ 0.23
HDDC3-205ENST00000559898 RPS27LQ71UM5 84 aaKnown RBP16.51■□□□□ 0.23
HDDC3-205ENST00000559898 LURAP1LQ8IV03 231 aa16.51■□□□□ 0.23
HDDC3-205ENST00000559898 ACOT4Q8N9L9 421 aa16.51■□□□□ 0.23
HDDC3-205ENST00000559898 UHMK1Q8TAS1 419 aaKnown RBP16.51■□□□□ 0.23
HDDC3-205ENST00000559898 ALOXE3Q9BYJ1 711 aa16.51■□□□□ 0.23
HDDC3-205ENST00000559898 PITHD1Q9GZP4 211 aaPredicted RBP16.51■□□□□ 0.23
HDDC3-205ENST00000559898 CDC42EP4Q9H3Q1 356 aaKnown RBP16.51■□□□□ 0.23
HDDC3-205ENST00000559898 TRIM45Q9H8W5 580 aaPredicted RBP16.51■□□□□ 0.23
HDDC3-205ENST00000559898 COPS7BQ9H9Q2 264 aaPredicted RBP16.51■□□□□ 0.23
HDDC3-205ENST00000559898 DEPPQ9NTK1 212 aa16.51■□□□□ 0.23
HDDC3-205ENST00000559898 OPTCQ9UBM4 332 aa16.51■□□□□ 0.23
HDDC3-205ENST00000559898 PPIEQ9UNP9 301 aaKnown RBP16.51■□□□□ 0.23
HDDC3-205ENST00000559898 PCNX1Q96RV3 2341 aa16.5■□□□□ 0.23
HDDC3-205ENST00000559898 A0A096LPK6 155 aa16.5■□□□□ 0.23
HDDC3-205ENST00000559898 A0A0G2JMM0 328 aa16.5■□□□□ 0.23
HDDC3-205ENST00000559898 A0A1W2PPB8 328 aa16.5■□□□□ 0.23
HDDC3-205ENST00000559898 A0A1W2PRS3 328 aa16.5■□□□□ 0.23
HDDC3-205ENST00000559898 ARHGAP10A1A4S6 786 aa16.5■□□□□ 0.23
HDDC3-205ENST00000559898 KIR3DP1A8MWS1 328 aa16.5■□□□□ 0.23
HDDC3-205ENST00000559898 HRKO00198 91 aa16.5■□□□□ 0.23
HDDC3-205ENST00000559898 SLC19A2O60779 497 aa16.5■□□□□ 0.23
HDDC3-205ENST00000559898 ITGA10O75578 1167 aa16.5■□□□□ 0.23
HDDC3-205ENST00000559898 ETHE1O95571 254 aa16.5■□□□□ 0.23
HDDC3-205ENST00000559898 GSTM2P28161 218 aa16.5■□□□□ 0.23
HDDC3-205ENST00000559898 CYB561P49447 251 aa16.5■□□□□ 0.23
HDDC3-205ENST00000559898 MEOX1P50221 254 aa16.5■□□□□ 0.23
HDDC3-205ENST00000559898 PER3P56645 1201 aa16.5■□□□□ 0.23
HDDC3-205ENST00000559898 NAB1Q13506 487 aa16.5■□□□□ 0.23
HDDC3-205ENST00000559898 SETDB1Q15047 1291 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms