RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 MC1RQ01726 317 aa9.87□□□□□ -0.83
TPM1-221ENST00000559831 KLC1Q07866 573 aa9.87□□□□□ -0.83
TPM1-221ENST00000559831 TARDBPQ13148 414 aaKnown RBP eCLIP9.87□□□□□ -0.83
TPM1-221ENST00000559831 FAM53BQ14153 422 aa9.87□□□□□ -0.83
TPM1-221ENST00000559831 IL11RAQ14626 422 aa9.87□□□□□ -0.83
TPM1-221ENST00000559831 MAPRE2Q15555 327 aa9.87□□□□□ -0.83
TPM1-221ENST00000559831 SYT16Q17RD7 645 aa9.87□□□□□ -0.83
TPM1-221ENST00000559831 PGS1Q32NB8 556 aa9.87□□□□□ -0.83
TPM1-221ENST00000559831 C3orf38Q5JPI3 329 aa9.87□□□□□ -0.83
TPM1-221ENST00000559831 ARHGAP40Q5TG30 622 aa9.87□□□□□ -0.83
TPM1-221ENST00000559831 C18orf63Q68DL7 685 aa9.87□□□□□ -0.83
TPM1-221ENST00000559831 MRM1Q6IN84 353 aaKnown RBP9.87□□□□□ -0.83
TPM1-221ENST00000559831 FAM71E1Q6IPT2 247 aa9.87□□□□□ -0.83
TPM1-221ENST00000559831 ANKRD26P1Q6NSI1 321 aa9.87□□□□□ -0.83
TPM1-221ENST00000559831 NIPAL1Q6NVV3 410 aa9.87□□□□□ -0.83
TPM1-221ENST00000559831 CEACAM20Q6UY09 585 aa9.87□□□□□ -0.83
TPM1-221ENST00000559831 IKBIPQ70UQ0 350 aa9.87□□□□□ -0.83
TPM1-221ENST00000559831 GPR180Q86V85 440 aa9.87□□□□□ -0.83
TPM1-221ENST00000559831 BPHLQ86WA6 291 aaPredicted RBP9.87□□□□□ -0.83
TPM1-221ENST00000559831 SNX32Q86XE0 403 aa9.87□□□□□ -0.83
TPM1-221ENST00000559831 MARCH9Q86YJ5 346 aa9.87□□□□□ -0.83
TPM1-221ENST00000559831 CA13Q8N1Q1 262 aa9.87□□□□□ -0.83
TPM1-221ENST00000559831 POU5F2Q8N7G0 328 aa9.87□□□□□ -0.83
TPM1-221ENST00000559831 FAM47BQ8NA70 645 aa9.87□□□□□ -0.83
TPM1-221ENST00000559831 OR7A2PQ8NGA2 310 aa9.87□□□□□ -0.83
TPM1-221ENST00000559831 WDR36Q8NI36 951 aaKnown RBP9.87□□□□□ -0.83
TPM1-221ENST00000559831 PROKR1Q8TCW9 393 aa9.87□□□□□ -0.83
TPM1-221ENST00000559831 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.87□□□□□ -0.83
TPM1-221ENST00000559831 PMEPA1Q969W9 287 aa9.87□□□□□ -0.83
TPM1-221ENST00000559831 COL26A1Q96A83 441 aa9.87□□□□□ -0.83
TPM1-221ENST00000559831 FAIM2Q9BWQ8 316 aa9.87□□□□□ -0.83
TPM1-221ENST00000559831 NPLQ9BXD5 320 aaPredicted RBP9.87□□□□□ -0.83
TPM1-221ENST00000559831 RBCK1Q9BYM8 510 aa9.87□□□□□ -0.83
TPM1-221ENST00000559831 ACTL8Q9H568 366 aa9.87□□□□□ -0.83
TPM1-221ENST00000559831 FBXO8Q9NRD0 319 aa9.87□□□□□ -0.83
TPM1-221ENST00000559831 ARL8BQ9NVJ2 186 aa9.87□□□□□ -0.83
TPM1-221ENST00000559831 SH3BP4Q9P0V3 963 aa9.87□□□□□ -0.83
TPM1-221ENST00000559831 PHF11Q9UIL8 331 aa9.87□□□□□ -0.83
TPM1-221ENST00000559831 DAPP1Q9UN19 280 aa9.87□□□□□ -0.83
TPM1-221ENST00000559831 CDC14AQ9UNH5 594 aa9.87□□□□□ -0.83
TPM1-221ENST00000559831 SATB2Q9UPW6 733 aa9.87□□□□□ -0.83
TPM1-221ENST00000559831 ATG4BQ9Y4P1 393 aa9.87□□□□□ -0.83
TPM1-221ENST00000559831 ASB4Q9Y574 426 aa9.87□□□□□ -0.83
TPM1-221ENST00000559831 SPACA6W5XKT8 324 aa9.87□□□□□ -0.83
TPM1-221ENST00000559831 CNOT1A5YKK6 2376 aaKnown RBP9.87□□□□□ -0.83
TPM1-221ENST00000559831 LOC100653049A0A140TA62 436 aa9.86□□□□□ -0.83
TPM1-221ENST00000559831 A0A1W2PR48 441 aa9.86□□□□□ -0.83
TPM1-221ENST00000559831 FAM234BA2RU67 622 aa9.86□□□□□ -0.83
TPM1-221ENST00000559831 DCDC2BA2VCK2 349 aa9.86□□□□□ -0.83
TPM1-221ENST00000559831 GLOD5A6NK44 160 aa9.86□□□□□ -0.83
TPM1-221ENST00000559831 CAPN14A8MX76 684 aa9.86□□□□□ -0.83
TPM1-221ENST00000559831 PLD2O14939 933 aa9.86□□□□□ -0.83
TPM1-221ENST00000559831 SLC22A2O15244 555 aa9.86□□□□□ -0.83
TPM1-221ENST00000559831 PRMT3O60678 531 aa9.86□□□□□ -0.83
TPM1-221ENST00000559831 KRT34O76011 436 aa9.86□□□□□ -0.83
TPM1-221ENST00000559831 KIAA0754O94854 1291 aa9.86□□□□□ -0.83
TPM1-221ENST00000559831 UBOX5O94941 541 aa9.86□□□□□ -0.83
TPM1-221ENST00000559831 CBX6O95503 412 aa9.86□□□□□ -0.83
TPM1-221ENST00000559831 HBQ1P09105 142 aa9.86□□□□□ -0.83
TPM1-221ENST00000559831 NR2F6P10588 404 aa9.86□□□□□ -0.83
TPM1-221ENST00000559831 COX4I1P13073 169 aa9.86□□□□□ -0.83
TPM1-221ENST00000559831 RNH1P13489 461 aaKnown RBP9.86□□□□□ -0.83
TPM1-221ENST00000559831 ZNF28P17035 718 aa9.86□□□□□ -0.83
TPM1-221ENST00000559831 ADSLP30566 484 aaPredicted RBP9.86□□□□□ -0.83
TPM1-221ENST00000559831 S100A3P33764 101 aa9.86□□□□□ -0.83
TPM1-221ENST00000559831 BUD31P41223 144 aaPredicted RBP9.86□□□□□ -0.83
TPM1-221ENST00000559831 GSTM5P46439 218 aa9.86□□□□□ -0.83
TPM1-221ENST00000559831 GCGRP47871 477 aa9.86□□□□□ -0.83
TPM1-221ENST00000559831 DGKQP52824 942 aa9.86□□□□□ -0.83
TPM1-221ENST00000559831 RAB38P57729 211 aa9.86□□□□□ -0.83
TPM1-221ENST00000559831 RAB15P59190 212 aa9.86□□□□□ -0.83
TPM1-221ENST00000559831 TNFRSF17Q02223 184 aa9.86□□□□□ -0.83
TPM1-221ENST00000559831 EIF3IQ13347 325 aaKnown RBP9.86□□□□□ -0.83
TPM1-221ENST00000559831 CYLC2Q14093 348 aaPredicted RBP9.86□□□□□ -0.83
TPM1-221ENST00000559831 HEPACAMQ14CZ8 416 aa9.86□□□□□ -0.83
TPM1-221ENST00000559831 UGT8Q16880 541 aa9.86□□□□□ -0.83
TPM1-221ENST00000559831 FAM174BQ3ZCQ3 159 aa9.86□□□□□ -0.83
TPM1-221ENST00000559831 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.86□□□□□ -0.83
TPM1-221ENST00000559831 TIGD2Q4W5G0 525 aa9.86□□□□□ -0.83
TPM1-221ENST00000559831 SPANXN4Q5MJ08 99 aa9.86□□□□□ -0.83
TPM1-221ENST00000559831 DCAF12Q5T6F0 453 aa9.86□□□□□ -0.83
TPM1-221ENST00000559831 CPTPQ5TA50 214 aa9.86□□□□□ -0.83
TPM1-221ENST00000559831 NDUFAF5Q5TEU4 345 aa9.86□□□□□ -0.83
TPM1-221ENST00000559831 RHBDD2Q6NTF9 364 aa9.86□□□□□ -0.83
TPM1-221ENST00000559831 C6orf89Q6UWU4 347 aa9.86□□□□□ -0.83
TPM1-221ENST00000559831 R3HCC1LQ7Z5L2 792 aaKnown RBP9.86□□□□□ -0.83
TPM1-221ENST00000559831 TMPRSS12Q86WS5 348 aa9.86□□□□□ -0.83
TPM1-221ENST00000559831 TICAM1Q8IUC6 712 aa9.86□□□□□ -0.83
TPM1-221ENST00000559831 FUNDC1Q8IVP5 155 aa9.86□□□□□ -0.83
TPM1-221ENST00000559831 DSELQ8IZU8 1212 aa9.86□□□□□ -0.83
TPM1-221ENST00000559831 SHISA5Q8N114 240 aa9.86□□□□□ -0.83
TPM1-221ENST00000559831 GLB1L3Q8NCI6 653 aaPredicted RBP9.86□□□□□ -0.83
TPM1-221ENST00000559831 OR51Q1Q8NH59 317 aa9.86□□□□□ -0.83
TPM1-221ENST00000559831 STARD8Q92502 1023 aa9.86□□□□□ -0.83
TPM1-221ENST00000559831 UCN3Q969E3 161 aa9.86□□□□□ -0.83
TPM1-221ENST00000559831 EXOSC8Q96B26 276 aaKnown RBP9.86□□□□□ -0.83
TPM1-221ENST00000559831 PPCDCQ96CD2 204 aa9.86□□□□□ -0.83
TPM1-221ENST00000559831 SPDL1Q96EA4 605 aa9.86□□□□□ -0.83
TPM1-221ENST00000559831 PEX11GQ96HA9 241 aa9.86□□□□□ -0.83
TPM1-221ENST00000559831 TAAR9Q96RI9 348 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms