RNA–Protein interactions for RNA: ENST00000559711.5

USP3-213, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-213ENST00000559711 ALDH9A1P49189 494 aa12.04□□□□□ -0.48
USP3-213ENST00000559711 AQP4P55087 323 aa12.04□□□□□ -0.48
USP3-213ENST00000559711 MAZP56270 477 aaKnown RBP12.04□□□□□ -0.48
USP3-213ENST00000559711 RAB8AP61006 207 aa12.04□□□□□ -0.48
USP3-213ENST00000559711 MANEAQ5SRI9 462 aa12.04□□□□□ -0.48
USP3-213ENST00000559711 KLHL35Q6PF15 583 aa12.04□□□□□ -0.48
USP3-213ENST00000559711 RNF44Q7L0R7 432 aa12.04□□□□□ -0.48
USP3-213ENST00000559711 ZNF761Q86XN6 746 aaPredicted RBP12.04□□□□□ -0.48
USP3-213ENST00000559711 EID3Q8N140 333 aa12.04□□□□□ -0.48
USP3-213ENST00000559711 CLEC4FQ8N1N0 589 aa12.04□□□□□ -0.48
USP3-213ENST00000559711 CAMKVQ8NCB2 501 aa12.04□□□□□ -0.48
USP3-213ENST00000559711 ICA1LQ8NDH6 482 aa12.04□□□□□ -0.48
USP3-213ENST00000559711 PSMA8Q8TAA3 256 aa12.04□□□□□ -0.48
USP3-213ENST00000559711 PNPT1Q8TCS8 783 aaKnown RBP12.04□□□□□ -0.48
USP3-213ENST00000559711 UTP15Q8TED0 518 aaKnown RBP12.04□□□□□ -0.48
USP3-213ENST00000559711 RSC1A1Q92681 617 aa12.04□□□□□ -0.48
USP3-213ENST00000559711 FAM162AQ96A26 154 aa12.04□□□□□ -0.48
USP3-213ENST00000559711 BTBD9Q96Q07 612 aa12.04□□□□□ -0.48
USP3-213ENST00000559711 SEPHS2Q99611 448 aa12.04□□□□□ -0.48
USP3-213ENST00000559711 SLC35A5Q9BS91 424 aa12.04□□□□□ -0.48
USP3-213ENST00000559711 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.04□□□□□ -0.48
USP3-213ENST00000559711 ROGDIQ9GZN7 287 aa12.04□□□□□ -0.48
USP3-213ENST00000559711 EPS8L2Q9H6S3 715 aa12.04□□□□□ -0.48
USP3-213ENST00000559711 DOLKQ9UPQ8 538 aa12.04□□□□□ -0.48
USP3-213ENST00000559711 PLXND1Q9Y4D7 1925 aa12.04□□□□□ -0.48
USP3-213ENST00000559711 A0A0J9YVX5 310 aa12.03□□□□□ -0.48
USP3-213ENST00000559711 A0A1W2PR48 441 aa12.03□□□□□ -0.48
USP3-213ENST00000559711 URADA6NGE7 173 aa12.03□□□□□ -0.48
USP3-213ENST00000559711 LILRA5A6NI73 299 aa12.03□□□□□ -0.48
USP3-213ENST00000559711 UBXN7O94888 489 aa12.03□□□□□ -0.48
USP3-213ENST00000559711 NTRK1P04629 796 aa12.03□□□□□ -0.48
USP3-213ENST00000559711 UQCRC2P22695 453 aa12.03□□□□□ -0.48
USP3-213ENST00000559711 CERS1P27544 350 aa12.03□□□□□ -0.48
USP3-213ENST00000559711 CCT8P50990 548 aa12.03□□□□□ -0.48
USP3-213ENST00000559711 MANFP55145 182 aaKnown RBP12.03□□□□□ -0.48
USP3-213ENST00000559711 C21orf59P57076 290 aa12.03□□□□□ -0.48
USP3-213ENST00000559711 CHRNB3Q05901 458 aa12.03□□□□□ -0.48
USP3-213ENST00000559711 VAC14Q08AM6 782 aa12.03□□□□□ -0.48
USP3-213ENST00000559711 FADDQ13158 208 aa12.03□□□□□ -0.48
USP3-213ENST00000559711 ATP6AP1Q15904 470 aa12.03□□□□□ -0.48
USP3-213ENST00000559711 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.03□□□□□ -0.48
USP3-213ENST00000559711 ARMC6Q6NXE6 501 aa12.03□□□□□ -0.48
USP3-213ENST00000559711 ZNF438Q7Z4V0 828 aa12.03□□□□□ -0.48
USP3-213ENST00000559711 UCN3Q969E3 161 aa12.03□□□□□ -0.48
USP3-213ENST00000559711 NCLNQ969V3 563 aa12.03□□□□□ -0.48
USP3-213ENST00000559711 EME1Q96AY2 570 aa12.03□□□□□ -0.48
USP3-213ENST00000559711 ZBED6CLQ96FA7 236 aaPredicted RBP12.03□□□□□ -0.48
USP3-213ENST00000559711 RNF145Q96MT1 663 aa12.03□□□□□ -0.48
USP3-213ENST00000559711 ARHGEF17Q96PE2 2063 aaPredicted RBP12.03□□□□□ -0.48
USP3-213ENST00000559711 SEMA6CQ9H3T2 930 aa12.03□□□□□ -0.48
USP3-213ENST00000559711 RAD21L1Q9H4I0 556 aa12.03□□□□□ -0.48
USP3-213ENST00000559711 CXorf36Q9H7Y0 433 aa12.03□□□□□ -0.48
USP3-213ENST00000559711 YY1AP1Q9H869 796 aa12.03□□□□□ -0.48
USP3-213ENST00000559711 ERVMER34-1Q9H9K5 563 aa12.03□□□□□ -0.48
USP3-213ENST00000559711 NEUROD4Q9HD90 331 aa12.03□□□□□ -0.48
USP3-213ENST00000559711 LYARQ9NX58 379 aaKnown RBP12.03□□□□□ -0.48
USP3-213ENST00000559711 CES1P1Q9UKY3 287 aa12.03□□□□□ -0.48
USP3-213ENST00000559711 ATG4BQ9Y4P1 393 aa12.03□□□□□ -0.48
USP3-213ENST00000559711 LOC105369274A0A096LPK9 316 aa12.03□□□□□ -0.48
USP3-213ENST00000559711 LOC102723532A0A0G2JNH3 316 aa12.03□□□□□ -0.48
USP3-213ENST00000559711 H0YGG7 62 aa12.03□□□□□ -0.48
USP3-213ENST00000559711 ZSCAN9O15535 394 aaPredicted RBP12.03□□□□□ -0.48
USP3-213ENST00000559711 P2RX6O15547 441 aa12.03□□□□□ -0.48
USP3-213ENST00000559711 PROM1O43490 865 aa12.03□□□□□ -0.48
USP3-213ENST00000559711 TPST1O60507 370 aa12.03□□□□□ -0.48
USP3-213ENST00000559711 PRAMEF10O60809 474 aa12.03□□□□□ -0.48
USP3-213ENST00000559711 TNFRSF21O75509 655 aa12.03□□□□□ -0.48
USP3-213ENST00000559711 PIAS2O75928 621 aa12.03□□□□□ -0.48
USP3-213ENST00000559711 PRKD3O94806 890 aa12.03□□□□□ -0.48
USP3-213ENST00000559711 KRT75O95678 551 aa12.03□□□□□ -0.48
USP3-213ENST00000559711 SERPINA1P01009 418 aa12.03□□□□□ -0.48
USP3-213ENST00000559711 RPSAP08865 295 aaKnown RBP12.03□□□□□ -0.48
USP3-213ENST00000559711 ZNF888P0CJ79 500 aaPredicted RBP12.03□□□□□ -0.48
USP3-213ENST00000559711 TDGF1P13385 188 aa12.03□□□□□ -0.48
USP3-213ENST00000559711 PVRP15151 417 aa12.03□□□□□ -0.48
USP3-213ENST00000559711 TYRP1P17643 537 aa12.03□□□□□ -0.48
USP3-213ENST00000559711 KDELR2P33947 212 aa12.03□□□□□ -0.48
USP3-213ENST00000559711 PCGF2P35227 344 aa12.03□□□□□ -0.48
USP3-213ENST00000559711 ARF3P61204 181 aaPredicted RBP12.03□□□□□ -0.48
USP3-213ENST00000559711 PPP1CAP62136 330 aa12.03□□□□□ -0.48
USP3-213ENST00000559711 BTN3A2P78410 334 aa12.03□□□□□ -0.48
USP3-213ENST00000559711 RBBP4Q09028 425 aa12.03□□□□□ -0.48
USP3-213ENST00000559711 C16orf72Q14CZ0 275 aa12.03□□□□□ -0.48
USP3-213ENST00000559711 FRMPD2BQ6IN97 320 aa12.03□□□□□ -0.48
USP3-213ENST00000559711 PPP4R4Q6NUP7 873 aa12.03□□□□□ -0.48
USP3-213ENST00000559711 ENPP6Q6UWR7 440 aa12.03□□□□□ -0.48
USP3-213ENST00000559711 WDR5BQ86VZ2 330 aa12.03□□□□□ -0.48
USP3-213ENST00000559711 OR4N4Q8N0Y3 316 aa12.03□□□□□ -0.48
USP3-213ENST00000559711 FAM86B1Q8N7N1 296 aa12.03□□□□□ -0.48
USP3-213ENST00000559711 FBXO30Q8TB52 745 aa12.03□□□□□ -0.48
USP3-213ENST00000559711 EXOSC8Q96B26 276 aaKnown RBP12.03□□□□□ -0.48
USP3-213ENST00000559711 DPH2Q9BQC3 489 aaPredicted RBP12.03□□□□□ -0.48
USP3-213ENST00000559711 KLHL25Q9H0H3 589 aa12.03□□□□□ -0.48
USP3-213ENST00000559711 VCXQ9H320 206 aa12.03□□□□□ -0.48
USP3-213ENST00000559711 TMEM38AQ9H6F2 299 aa12.03□□□□□ -0.48
USP3-213ENST00000559711 MAGIXQ9H6Y5 334 aa12.03□□□□□ -0.48
USP3-213ENST00000559711 COQ10BQ9H8M1 238 aa12.03□□□□□ -0.48
USP3-213ENST00000559711 SLC35C2Q9NQQ7 365 aa12.03□□□□□ -0.48
USP3-213ENST00000559711 PRMT8Q9NR22 394 aaPredicted RBP12.03□□□□□ -0.48
USP3-213ENST00000559711 C1GALT1Q9NS00 363 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms