RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 DDX47Q9H0S4 455 aaKnown RBP12.17□□□□□ -0.46
TPM1-220ENST00000559556 HPF1Q9NWY4 346 aa12.17□□□□□ -0.46
TPM1-220ENST00000559556 ERVK-11Q9UQG0 969 aa12.17□□□□□ -0.46
TPM1-220ENST00000559556 PSAT1Q9Y617 370 aa12.17□□□□□ -0.46
TPM1-220ENST00000559556 FAM95CA0A1B0GW59 222 aa12.16□□□□□ -0.46
TPM1-220ENST00000559556 PINLYPA6NC86 204 aa12.16□□□□□ -0.46
TPM1-220ENST00000559556 NKX2-6A6NCS4 301 aa12.16□□□□□ -0.46
TPM1-220ENST00000559556 FAM90A27PA6NNH2 459 aa12.16□□□□□ -0.46
TPM1-220ENST00000559556 USP27XA6NNY8 438 aa12.16□□□□□ -0.46
TPM1-220ENST00000559556 ACOT7O00154 380 aa12.16□□□□□ -0.46
TPM1-220ENST00000559556 CLDN4O14493 209 aa12.16□□□□□ -0.46
TPM1-220ENST00000559556 B3GALT2O43825 422 aa12.16□□□□□ -0.46
TPM1-220ENST00000559556 CLEC3AO75596 197 aa12.16□□□□□ -0.46
TPM1-220ENST00000559556 OR2J2O76002 312 aa12.16□□□□□ -0.46
TPM1-220ENST00000559556 ZFAND5O76080 213 aa12.16□□□□□ -0.46
TPM1-220ENST00000559556 WDR47O94967 919 aa12.16□□□□□ -0.46
TPM1-220ENST00000559556 SAT1P21673 171 aa12.16□□□□□ -0.46
TPM1-220ENST00000559556 HPDP32754 393 aaPredicted RBP12.16□□□□□ -0.46
TPM1-220ENST00000559556 NR0B1P51843 470 aaKnown RBP12.16□□□□□ -0.46
TPM1-220ENST00000559556 SLBPQ14493 270 aaKnown RBP eCLIP12.16□□□□□ -0.46
TPM1-220ENST00000559556 ZNF460Q14592 562 aa12.16□□□□□ -0.46
TPM1-220ENST00000559556 TSNQ15631 228 aaKnown RBP12.16□□□□□ -0.46
TPM1-220ENST00000559556 PAOXQ6QHF9 649 aa12.16□□□□□ -0.46
TPM1-220ENST00000559556 C16orf47Q6ZP98 133 aaPredicted RBP12.16□□□□□ -0.46
TPM1-220ENST00000559556 ACAD11Q709F0 780 aa12.16□□□□□ -0.46
TPM1-220ENST00000559556 VN1R5Q7Z5H4 357 aa12.16□□□□□ -0.46
TPM1-220ENST00000559556 DMRTC2Q8IXT2 367 aaPredicted RBP12.16□□□□□ -0.46
TPM1-220ENST00000559556 TMEM132CQ8N3T6 1108 aa12.16□□□□□ -0.46
TPM1-220ENST00000559556 FAM47BQ8NA70 645 aa12.16□□□□□ -0.46
TPM1-220ENST00000559556 ASB15Q8WXK1 588 aa12.16□□□□□ -0.46
TPM1-220ENST00000559556 RHBDF1Q96CC6 855 aa12.16□□□□□ -0.46
TPM1-220ENST00000559556 NT5DC2Q9H857 520 aa12.16□□□□□ -0.46
TPM1-220ENST00000559556 KCNJ16Q9NPI9 418 aa12.16□□□□□ -0.46
TPM1-220ENST00000559556 MYOTQ9UBF9 498 aa12.16□□□□□ -0.46
TPM1-220ENST00000559556 TNFRSF10DQ9UBN6 386 aa12.16□□□□□ -0.46
TPM1-220ENST00000559556 A0A0G2JMM0 328 aa12.15□□□□□ -0.46
TPM1-220ENST00000559556 A0A1W2PPB8 328 aa12.15□□□□□ -0.46
TPM1-220ENST00000559556 A0A1W2PRS3 328 aa12.15□□□□□ -0.46
TPM1-220ENST00000559556 OR14I1A6ND48 311 aa12.15□□□□□ -0.46
TPM1-220ENST00000559556 KIR3DP1A8MWS1 328 aa12.15□□□□□ -0.46
TPM1-220ENST00000559556 CYR61O00622 381 aa12.15□□□□□ -0.46
TPM1-220ENST00000559556 H2AFYO75367 372 aaKnown RBP12.15□□□□□ -0.46
TPM1-220ENST00000559556 PDE9AO76083 593 aa12.15□□□□□ -0.46
TPM1-220ENST00000559556 GLSO94925 669 aaPredicted RBP12.15□□□□□ -0.46
TPM1-220ENST00000559556 OR6B1O95007 311 aa12.15□□□□□ -0.46
TPM1-220ENST00000559556 IGHG3P01860 377 aa12.15□□□□□ -0.46
TPM1-220ENST00000559556 CD1EP15812 388 aa12.15□□□□□ -0.46
TPM1-220ENST00000559556 SOX3P41225 446 aa12.15□□□□□ -0.46
TPM1-220ENST00000559556 GDF5P43026 501 aa12.15□□□□□ -0.46
TPM1-220ENST00000559556 HK2P52789 917 aa12.15□□□□□ -0.46
TPM1-220ENST00000559556 LIM2P55344 173 aa12.15□□□□□ -0.46
TPM1-220ENST00000559556 NUP107P57740 925 aa12.15□□□□□ -0.46
TPM1-220ENST00000559556 TAS2R39P59534 338 aa12.15□□□□□ -0.46
TPM1-220ENST00000559556 PPIAP62937 165 aaKnown RBP12.15□□□□□ -0.46
TPM1-220ENST00000559556 C18orf21Q32NC0 220 aaPredicted RBP12.15□□□□□ -0.46
TPM1-220ENST00000559556 XKR6Q5GH73 641 aa12.15□□□□□ -0.46
TPM1-220ENST00000559556 HP1BP3Q5SSJ5 553 aaPredicted RBP12.15□□□□□ -0.46
TPM1-220ENST00000559556 TRIM40Q6P9F5 258 aa12.15□□□□□ -0.46
TPM1-220ENST00000559556 IL20RBQ6UXL0 311 aa12.15□□□□□ -0.46
TPM1-220ENST00000559556 RGS9BPQ6ZS82 235 aa12.15□□□□□ -0.46
TPM1-220ENST00000559556 FRA10AC1Q70Z53 315 aa12.15□□□□□ -0.46
TPM1-220ENST00000559556 KRT78Q8N1N4 520 aa12.15□□□□□ -0.46
TPM1-220ENST00000559556 SLC35F6Q8N357 371 aa12.15□□□□□ -0.46
TPM1-220ENST00000559556 MORN4Q8NDC4 146 aa12.15□□□□□ -0.46
TPM1-220ENST00000559556 OR14A16Q8NHC5 309 aa12.15□□□□□ -0.46
TPM1-220ENST00000559556 ANKRD49Q8WVL7 239 aa12.15□□□□□ -0.46
TPM1-220ENST00000559556 CCT6BQ92526 530 aa12.15□□□□□ -0.46
TPM1-220ENST00000559556 DAZLQ92904 295 aaKnown RBP12.15□□□□□ -0.46
TPM1-220ENST00000559556 RASL10BQ96S79 203 aa12.15□□□□□ -0.46
TPM1-220ENST00000559556 SERINC2Q96SA4 455 aa12.15□□□□□ -0.46
TPM1-220ENST00000559556 CSF3RQ99062 836 aa12.15□□□□□ -0.46
TPM1-220ENST00000559556 MCMBPQ9BTE3 642 aa12.15□□□□□ -0.46
TPM1-220ENST00000559556 TTTY12Q9BZ98 90 aa12.15□□□□□ -0.46
TPM1-220ENST00000559556 UCK2Q9BZX2 261 aa12.15□□□□□ -0.46
TPM1-220ENST00000559556 REXO4Q9GZR2 422 aaKnown RBP12.15□□□□□ -0.46
TPM1-220ENST00000559556 DEFB127Q9H1M4 99 aa12.15□□□□□ -0.46
TPM1-220ENST00000559556 EHD1Q9H4M9 534 aa12.15□□□□□ -0.46
TPM1-220ENST00000559556 LIN28AQ9H9Z2 209 aaKnown RBP12.15□□□□□ -0.46
TPM1-220ENST00000559556 POPDC3Q9HBV1 291 aa12.15□□□□□ -0.46
TPM1-220ENST00000559556 GPRC5BQ9NZH0 403 aa12.15□□□□□ -0.46
TPM1-220ENST00000559556 CTNNAL1Q9UBT7 734 aa12.15□□□□□ -0.46
TPM1-220ENST00000559556 VTI1BQ9UEU0 232 aa12.15□□□□□ -0.46
TPM1-220ENST00000559556 KCNN3Q9UGI6 736 aa12.15□□□□□ -0.46
TPM1-220ENST00000559556 SNX12Q9UMY4 172 aa12.15□□□□□ -0.46
TPM1-220ENST00000559556 DAPP1Q9UN19 280 aa12.15□□□□□ -0.46
TPM1-220ENST00000559556 CLCA3PQ9Y6N3 262 aa12.15□□□□□ -0.46
TPM1-220ENST00000559556 ABCA2Q9BZC7 2435 aa12.15□□□□□ -0.47
TPM1-220ENST00000559556 ANKDD1BA6NHY2 528 aa12.14□□□□□ -0.47
TPM1-220ENST00000559556 FAM166BA8MTA8 275 aa12.14□□□□□ -0.47
TPM1-220ENST00000559556 WISP3O95389 354 aaPredicted RBP12.14□□□□□ -0.47
TPM1-220ENST00000559556 HOXD4P09016 255 aaPredicted RBP12.14□□□□□ -0.47
TPM1-220ENST00000559556 ACVR2AP27037 513 aa12.14□□□□□ -0.47
TPM1-220ENST00000559556 CERS1P27544 350 aa12.14□□□□□ -0.47
TPM1-220ENST00000559556 GGT5P36269 586 aa12.14□□□□□ -0.47
TPM1-220ENST00000559556 PLA2G16P53816 162 aa12.14□□□□□ -0.47
TPM1-220ENST00000559556 MTTPP55157 894 aa12.14□□□□□ -0.47
TPM1-220ENST00000559556 PLGLB1Q02325 96 aa12.14□□□□□ -0.47
TPM1-220ENST00000559556 MGAT5Q09328 741 aa12.14□□□□□ -0.47
TPM1-220ENST00000559556 PMPCAQ10713 525 aa12.14□□□□□ -0.47
TPM1-220ENST00000559556 RCN2Q14257 317 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms