RNA–Protein interactions for RNA: ENST00000558745.5

TSPAN3-205, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-205ENST00000558745 PSMF1Q92530 271 aa12.99□□□□□ -0.33
TSPAN3-205ENST00000558745 RGMAQ96B86 450 aa12.99□□□□□ -0.33
TSPAN3-205ENST00000558745 L3HYPDHQ96EM0 354 aa12.99□□□□□ -0.33
TSPAN3-205ENST00000558745 ZIM3Q96PE6 472 aa12.99□□□□□ -0.33
TSPAN3-205ENST00000558745 KCNC2Q96PR1 638 aa12.99□□□□□ -0.33
TSPAN3-205ENST00000558745 FRG2BQ96QU4 278 aa12.99□□□□□ -0.33
TSPAN3-205ENST00000558745 KCNA7Q96RP8 456 aa12.99□□□□□ -0.33
TSPAN3-205ENST00000558745 SMAD5Q99717 465 aaKnown RBP12.99□□□□□ -0.33
TSPAN3-205ENST00000558745 NPLQ9BXD5 320 aaPredicted RBP12.99□□□□□ -0.33
TSPAN3-205ENST00000558745 ZNF717Q9BY31 904 aaPredicted RBP12.99□□□□□ -0.33
TSPAN3-205ENST00000558745 SHCBP1LQ9BZQ2 653 aa12.99□□□□□ -0.33
TSPAN3-205ENST00000558745 LHPPQ9H008 270 aa12.99□□□□□ -0.33
TSPAN3-205ENST00000558745 PRTFDC1Q9NRG1 225 aa12.99□□□□□ -0.33
TSPAN3-205ENST00000558745 ADGRE2Q9UHX3 823 aa12.99□□□□□ -0.33
TSPAN3-205ENST00000558745 TSC22D4Q9Y3Q8 395 aa12.99□□□□□ -0.33
TSPAN3-205ENST00000558745 TIMM22Q9Y584 194 aa12.99□□□□□ -0.33
TSPAN3-205ENST00000558745 CLDN16Q9Y5I7 305 aa12.99□□□□□ -0.33
TSPAN3-205ENST00000558745 NUP210LQ5VU65 1888 aa12.99□□□□□ -0.33
TSPAN3-205ENST00000558745 PRKRAO75569 313 aaKnown RBP12.98□□□□□ -0.33
TSPAN3-205ENST00000558745 OTCP00480 354 aa12.98□□□□□ -0.33
TSPAN3-205ENST00000558745 PRR35P0CG20 571 aa12.98□□□□□ -0.33
TSPAN3-205ENST00000558745 CHN1P15882 459 aa12.98□□□□□ -0.33
TSPAN3-205ENST00000558745 HIST1H1TP22492 207 aaPredicted RBP12.98□□□□□ -0.33
TSPAN3-205ENST00000558745 JAK1P23458 1154 aa12.98□□□□□ -0.33
TSPAN3-205ENST00000558745 BSGP35613 385 aa12.98□□□□□ -0.33
TSPAN3-205ENST00000558745 HTR6P50406 440 aa12.98□□□□□ -0.33
TSPAN3-205ENST00000558745 FOXA1P55317 472 aa12.98□□□□□ -0.33
TSPAN3-205ENST00000558745 ID2Q02363 134 aa12.98□□□□□ -0.33
TSPAN3-205ENST00000558745 ACTN3Q08043 901 aaPredicted RBP12.98□□□□□ -0.33
TSPAN3-205ENST00000558745 TGM3Q08188 693 aa12.98□□□□□ -0.33
TSPAN3-205ENST00000558745 SLAMF1Q13291 335 aa12.98□□□□□ -0.33
TSPAN3-205ENST00000558745 TMEM35AQ53FP2 167 aa12.98□□□□□ -0.33
TSPAN3-205ENST00000558745 LINC00696Q6ZRV3 163 aa12.98□□□□□ -0.33
TSPAN3-205ENST00000558745 PRICKLE2Q7Z3G6 844 aa12.98□□□□□ -0.33
TSPAN3-205ENST00000558745 C10orf107Q8IVU9 208 aa12.98□□□□□ -0.33
TSPAN3-205ENST00000558745 OR4N5Q8IXE1 308 aa12.98□□□□□ -0.33
TSPAN3-205ENST00000558745 KBTBD2Q8IY47 623 aa12.98□□□□□ -0.33
TSPAN3-205ENST00000558745 IQCKQ8N0W5 287 aa12.98□□□□□ -0.33
TSPAN3-205ENST00000558745 RIBC1Q8N443 379 aaPredicted RBP12.98□□□□□ -0.33
TSPAN3-205ENST00000558745 RBMXL3Q8N7X1 1067 aaKnown RBP12.98□□□□□ -0.33
TSPAN3-205ENST00000558745 TEX19Q8NA77 164 aa12.98□□□□□ -0.33
TSPAN3-205ENST00000558745 BRIX1Q8TDN6 353 aaKnown RBP12.98□□□□□ -0.33
TSPAN3-205ENST00000558745 TCP10LQ8TDR4 215 aa12.98□□□□□ -0.33
TSPAN3-205ENST00000558745 REPS1Q96D71 796 aa12.98□□□□□ -0.33
TSPAN3-205ENST00000558745 FAM111AQ96PZ2 611 aa12.98□□□□□ -0.33
TSPAN3-205ENST00000558745 TMEM109Q9BVC6 243 aa12.98□□□□□ -0.33
TSPAN3-205ENST00000558745 CLK4Q9HAZ1 481 aaKnown RBP12.98□□□□□ -0.33
TSPAN3-205ENST00000558745 TNFRSF12AQ9NP84 129 aa12.98□□□□□ -0.33
TSPAN3-205ENST00000558745 PLA2G3Q9NZ20 509 aa12.98□□□□□ -0.33
TSPAN3-205ENST00000558745 PTGFRNQ9P2B2 879 aa12.98□□□□□ -0.33
TSPAN3-205ENST00000558745 PLLPQ9Y342 182 aa12.98□□□□□ -0.33
TSPAN3-205ENST00000558745 CSAG2Q9Y5P2 127 aa12.98□□□□□ -0.33
TSPAN3-205ENST00000558745 USP9XQ93008 2570 aaPredicted RBP12.98□□□□□ -0.33
TSPAN3-205ENST00000558745 SPENQ96T58 3664 aaKnown RBP12.97□□□□□ -0.33
TSPAN3-205ENST00000558745 A0A1W2PQ72 361 aa12.97□□□□□ -0.33
TSPAN3-205ENST00000558745 ARHGAP10A1A4S6 786 aa12.97□□□□□ -0.33
TSPAN3-205ENST00000558745 A8MUI8 341 aa12.97□□□□□ -0.33
TSPAN3-205ENST00000558745 FOXE1O00358 373 aaPredicted RBP12.97□□□□□ -0.33
TSPAN3-205ENST00000558745 MANBAO00462 879 aa12.97□□□□□ -0.33
TSPAN3-205ENST00000558745 SUV39H1O43463 412 aa12.97□□□□□ -0.33
TSPAN3-205ENST00000558745 SLC28A2O43868 658 aa12.97□□□□□ -0.33
TSPAN3-205ENST00000558745 TMPRSS11DO60235 418 aa12.97□□□□□ -0.33
TSPAN3-205ENST00000558745 LDB3O75112 727 aa12.97□□□□□ -0.33
TSPAN3-205ENST00000558745 F10P00742 488 aa12.97□□□□□ -0.33
TSPAN3-205ENST00000558745 SERPINA7P05543 415 aa12.97□□□□□ -0.33
TSPAN3-205ENST00000558745 CPN2P22792 545 aa12.97□□□□□ -0.33
TSPAN3-205ENST00000558745 SERPINB3P29508 390 aa12.97□□□□□ -0.33
TSPAN3-205ENST00000558745 SERPINB1P30740 379 aa12.97□□□□□ -0.33
TSPAN3-205ENST00000558745 HNRNPH2P55795 449 aaKnown RBP12.97□□□□□ -0.33
TSPAN3-205ENST00000558745 KLRB1Q12918 225 aa12.97□□□□□ -0.33
TSPAN3-205ENST00000558745 IFT88Q13099 833 aa12.97□□□□□ -0.33
TSPAN3-205ENST00000558745 PCLAFQ15004 111 aa12.97□□□□□ -0.33
TSPAN3-205ENST00000558745 BTBD16Q32M84 506 aa12.97□□□□□ -0.33
TSPAN3-205ENST00000558745 GGTA1PQ4G0N0 100 aa12.97□□□□□ -0.33
TSPAN3-205ENST00000558745 CEP85LQ5SZL2 805 aa12.97□□□□□ -0.33
TSPAN3-205ENST00000558745 C18orf63Q68DL7 685 aa12.97□□□□□ -0.33
TSPAN3-205ENST00000558745 FCRLBQ6BAA4 426 aa12.97□□□□□ -0.33
TSPAN3-205ENST00000558745 PAPD4Q6PIY7 484 aaKnown RBP12.97□□□□□ -0.33
TSPAN3-205ENST00000558745 QSOX2Q6ZRP7 698 aa12.97□□□□□ -0.33
TSPAN3-205ENST00000558745 GPRIN3Q6ZVF9 776 aa12.97□□□□□ -0.33
TSPAN3-205ENST00000558745 SRFBP1Q8NEF9 429 aaKnown RBP12.97□□□□□ -0.33
TSPAN3-205ENST00000558745 METTL6Q8TCB7 284 aa12.97□□□□□ -0.33
TSPAN3-205ENST00000558745 DOK4Q8TEW6 326 aa12.97□□□□□ -0.33
TSPAN3-205ENST00000558745 SELENOMQ8WWX9 145 aa12.97□□□□□ -0.33
TSPAN3-205ENST00000558745 APOPT1Q96IL0 206 aa12.97□□□□□ -0.33
TSPAN3-205ENST00000558745 VPS50Q96JG6 964 aa12.97□□□□□ -0.33
TSPAN3-205ENST00000558745 TUBB6Q9BUF5 446 aa12.97□□□□□ -0.33
TSPAN3-205ENST00000558745 MECRQ9BV79 373 aa12.97□□□□□ -0.33
TSPAN3-205ENST00000558745 MRPL1Q9BYD6 325 aaKnown RBP12.97□□□□□ -0.33
TSPAN3-205ENST00000558745 TRIM4Q9C037 500 aa12.97□□□□□ -0.33
TSPAN3-205ENST00000558745 CENPHQ9H3R5 247 aa12.97□□□□□ -0.33
TSPAN3-205ENST00000558745 ELOVL6Q9H5J4 265 aa12.97□□□□□ -0.33
TSPAN3-205ENST00000558745 MID1IP1Q9NPA3 183 aa12.97□□□□□ -0.33
TSPAN3-205ENST00000558745 PRDM9Q9NQV7 894 aa12.97□□□□□ -0.33
TSPAN3-205ENST00000558745 PNO1Q9NRX1 252 aaKnown RBP12.97□□□□□ -0.33
TSPAN3-205ENST00000558745 RIC8BQ9NVN3 520 aa12.97□□□□□ -0.33
TSPAN3-205ENST00000558745 OXSMQ9NWU1 459 aa12.97□□□□□ -0.33
TSPAN3-205ENST00000558745 C19orf25Q9UFG5 118 aaPredicted RBP12.97□□□□□ -0.33
TSPAN3-205ENST00000558745 TRPS1Q9UHF7 1281 aa12.97□□□□□ -0.33
TSPAN3-205ENST00000558745 ZNF451Q9Y4E5 1061 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms