RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 ST6GAL1P15907 406 aa4.07□□□□□ -1.76
SPG11-211ENST00000558561 TNFSF4P23510 183 aa4.07□□□□□ -1.76
SPG11-211ENST00000558561 ACVR2AP27037 513 aa4.07□□□□□ -1.76
SPG11-211ENST00000558561 PSMB5P28074 263 aa4.07□□□□□ -1.76
SPG11-211ENST00000558561 RBMS1P29558 406 aaKnown RBP4.07□□□□□ -1.76
SPG11-211ENST00000558561 PRDX3P30048 256 aaKnown RBP4.07□□□□□ -1.76
SPG11-211ENST00000558561 HADHAP40939 763 aa4.07□□□□□ -1.76
SPG11-211ENST00000558561 ELK3P41970 407 aa4.07□□□□□ -1.76
SPG11-211ENST00000558561 BDKRB1P46663 353 aa4.07□□□□□ -1.76
SPG11-211ENST00000558561 GABRA4P48169 554 aa4.07□□□□□ -1.76
SPG11-211ENST00000558561 FOXM1Q08050 763 aa4.07□□□□□ -1.76
SPG11-211ENST00000558561 CUL1Q13616 776 aa4.07□□□□□ -1.76
SPG11-211ENST00000558561 DHX34Q14147 1143 aaKnown RBP4.07□□□□□ -1.76
SPG11-211ENST00000558561 KIR2DS5Q14953 304 aa4.07□□□□□ -1.76
SPG11-211ENST00000558561 GPR33Q49SQ1 333 aa4.07□□□□□ -1.76
SPG11-211ENST00000558561 FASTKD1Q53R41 847 aaKnown RBP4.07□□□□□ -1.76
SPG11-211ENST00000558561 HSP90AA5PQ58FG0 334 aa4.07□□□□□ -1.76
SPG11-211ENST00000558561 FAM209BQ5JX69 171 aa4.07□□□□□ -1.76
SPG11-211ENST00000558561 IZUMO3Q5VZ72 239 aa4.07□□□□□ -1.76
SPG11-211ENST00000558561 PLAG1Q6DJT9 500 aa4.07□□□□□ -1.76
SPG11-211ENST00000558561 PWWP2BQ6NUJ5 590 aa4.07□□□□□ -1.76
SPG11-211ENST00000558561 HIBCHQ6NVY1 386 aaPredicted RBP4.07□□□□□ -1.76
SPG11-211ENST00000558561 NEPROQ6NW34 567 aa4.07□□□□□ -1.76
SPG11-211ENST00000558561 WDR74Q6RFH5 385 aaPredicted RBP4.07□□□□□ -1.76
SPG11-211ENST00000558561 LINC00523Q86TU6 105 aa4.07□□□□□ -1.76
SPG11-211ENST00000558561 SPARTQ8N0X7 666 aa4.07□□□□□ -1.76
SPG11-211ENST00000558561 LINC01555Q8NAE3 123 aa4.07□□□□□ -1.76
SPG11-211ENST00000558561 AVL9Q8NBF6 648 aa4.07□□□□□ -1.76
SPG11-211ENST00000558561 SIDT2Q8NBJ9 832 aaKnown RBP4.07□□□□□ -1.76
SPG11-211ENST00000558561 PPFIBP2Q8ND30 876 aa4.07□□□□□ -1.76
SPG11-211ENST00000558561 MCUQ8NE86 351 aa4.07□□□□□ -1.76
SPG11-211ENST00000558561 OR6C4Q8NGE1 309 aa4.07□□□□□ -1.76
SPG11-211ENST00000558561 SVIPQ8NHG7 77 aa4.07□□□□□ -1.76
SPG11-211ENST00000558561 LPGAT1Q92604 370 aa4.07□□□□□ -1.76
SPG11-211ENST00000558561 TFGQ92734 400 aaPredicted RBP4.07□□□□□ -1.76
SPG11-211ENST00000558561 R3HDM4Q96D70 268 aa4.07□□□□□ -1.76
SPG11-211ENST00000558561 NXPE2Q96DL1 559 aa4.07□□□□□ -1.76
SPG11-211ENST00000558561 DCUN1D1Q96GG9 259 aa4.07□□□□□ -1.76
SPG11-211ENST00000558561 CCDC138Q96M89 665 aa4.07□□□□□ -1.76
SPG11-211ENST00000558561 ZNF578Q96N58 590 aaPredicted RBP4.07□□□□□ -1.76
SPG11-211ENST00000558561 FCRL4Q96PJ5 515 aa4.07□□□□□ -1.76
SPG11-211ENST00000558561 OR2A14Q96R47 310 aa4.07□□□□□ -1.76
SPG11-211ENST00000558561 OR6C1Q96RD1 312 aa4.07□□□□□ -1.76
SPG11-211ENST00000558561 NDNQ99608 321 aa4.07□□□□□ -1.76
SPG11-211ENST00000558561 NAPGQ99747 312 aaPredicted RBP4.07□□□□□ -1.76
SPG11-211ENST00000558561 LRRC1Q9BTT6 524 aa4.07□□□□□ -1.76
SPG11-211ENST00000558561 HGH1Q9BTY7 390 aa4.07□□□□□ -1.76
SPG11-211ENST00000558561 CARD6Q9BX69 1037 aa4.07□□□□□ -1.76
SPG11-211ENST00000558561 FRMD8P1Q9BZ68 369 aaPredicted RBP4.07□□□□□ -1.76
SPG11-211ENST00000558561 HAUS2Q9NVX0 235 aa4.07□□□□□ -1.76
SPG11-211ENST00000558561 GRHL1Q9NZI5 618 aa4.07□□□□□ -1.76
SPG11-211ENST00000558561 EHD3Q9NZN3 535 aa4.07□□□□□ -1.76
SPG11-211ENST00000558561 BFARQ9NZS9 450 aa4.07□□□□□ -1.76
SPG11-211ENST00000558561 PCYOX1Q9UHG3 505 aa4.07□□□□□ -1.76
SPG11-211ENST00000558561 PILRAQ9UKJ1 303 aa4.07□□□□□ -1.76
SPG11-211ENST00000558561 ACSL5Q9ULC5 683 aa4.07□□□□□ -1.76
SPG11-211ENST00000558561 PSAT1Q9Y617 370 aa4.07□□□□□ -1.76
SPG11-211ENST00000558561 SAR1BQ9Y6B6 198 aa4.07□□□□□ -1.76
SPG11-211ENST00000558561 MAD1L1Q9Y6D9 718 aa4.07□□□□□ -1.76
SPG11-211ENST00000558561 RPS6KL1Q9Y6S9 549 aa4.07□□□□□ -1.76
SPG11-211ENST00000558561 FAM169AQ9Y6X4 670 aa4.07□□□□□ -1.76
SPG11-211ENST00000558561 DOCK10Q96BY6 2186 aa4.06□□□□□ -1.76
SPG11-211ENST00000558561 FAM237BA0A1B0GVD1 139 aa4.06□□□□□ -1.76
SPG11-211ENST00000558561 A0A1W2PPV9 198 aa4.06□□□□□ -1.76
SPG11-211ENST00000558561 CTAGE15A4D2H0 777 aa4.06□□□□□ -1.76
SPG11-211ENST00000558561 OR5K3A6NET4 321 aa4.06□□□□□ -1.76
SPG11-211ENST00000558561 LILRA5A6NI73 299 aa4.06□□□□□ -1.76
SPG11-211ENST00000558561 OR5K4A6NMS3 321 aa4.06□□□□□ -1.76
SPG11-211ENST00000558561 ZAR1LA6NP61 321 aa4.06□□□□□ -1.76
SPG11-211ENST00000558561 LINC00473A8K010 186 aa4.06□□□□□ -1.76
SPG11-211ENST00000558561 ERI2A8K979 691 aaKnown RBP4.06□□□□□ -1.76
SPG11-211ENST00000558561 NVLO15381 856 aaKnown RBP4.06□□□□□ -1.76
SPG11-211ENST00000558561 CNOT3O75175 753 aaKnown RBP4.06□□□□□ -1.76
SPG11-211ENST00000558561 DNAJB6O75190 326 aa4.06□□□□□ -1.76
SPG11-211ENST00000558561 NDUFS3O75489 264 aa4.06□□□□□ -1.76
SPG11-211ENST00000558561 SPAG6O75602 509 aa4.06□□□□□ -1.76
SPG11-211ENST00000558561 C1QL1O75973 258 aa4.06□□□□□ -1.76
SPG11-211ENST00000558561 KIAA0754O94854 1291 aa4.06□□□□□ -1.76
SPG11-211ENST00000558561 SLCO2B1O94956 709 aa4.06□□□□□ -1.76
SPG11-211ENST00000558561 C1QAP02745 245 aa4.06□□□□□ -1.76
SPG11-211ENST00000558561 FESP07332 822 aa4.06□□□□□ -1.76
SPG11-211ENST00000558561 CBSLP0DN79 551 aa4.06□□□□□ -1.76
SPG11-211ENST00000558561 LIFP15018 202 aa4.06□□□□□ -1.76
SPG11-211ENST00000558561 NELFEP18615 380 aaKnown RBP4.06□□□□□ -1.76
SPG11-211ENST00000558561 MCM3P25205 808 aa4.06□□□□□ -1.76
SPG11-211ENST00000558561 SSTR1P30872 391 aa4.06□□□□□ -1.76
SPG11-211ENST00000558561 CSTF2P33240 577 aaKnown RBP eCLIP4.06□□□□□ -1.76
SPG11-211ENST00000558561 CBSP35520 551 aa4.06□□□□□ -1.76
SPG11-211ENST00000558561 NSG1P42857 185 aa4.06□□□□□ -1.76
SPG11-211ENST00000558561 SLC1A2P43004 574 aa4.06□□□□□ -1.76
SPG11-211ENST00000558561 TNNT3P45378 269 aaPredicted RBP4.06□□□□□ -1.76
SPG11-211ENST00000558561 PTH2RP49190 550 aa4.06□□□□□ -1.76
SPG11-211ENST00000558561 HMGA2P52926 109 aa4.06□□□□□ -1.76
SPG11-211ENST00000558561 CDKN2DP55273 166 aa4.06□□□□□ -1.76
SPG11-211ENST00000558561 EIF3BP55884 814 aaKnown RBP4.06□□□□□ -1.76
SPG11-211ENST00000558561 GPX6P59796 221 aa4.06□□□□□ -1.76
SPG11-211ENST00000558561 ERVPABLB-1P60509 514 aa4.06□□□□□ -1.76
SPG11-211ENST00000558561 RPS18P62269 152 aaKnown RBP4.06□□□□□ -1.76
SPG11-211ENST00000558561 PRAMEP78395 509 aa4.06□□□□□ -1.76
SPG11-211ENST00000558561 BMPR2Q13873 1038 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms