RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 TRAF3Q13114 568 aa11.75□□□□□ -0.53
SLIRP-211ENST00000557623 CUL3Q13618 768 aa11.75□□□□□ -0.53
SLIRP-211ENST00000557623 RUNX2Q13950 521 aa11.75□□□□□ -0.53
SLIRP-211ENST00000557623 FRG2Q64ET8 278 aa11.75□□□□□ -0.53
SLIRP-211ENST00000557623 JMJD6Q6NYC1 403 aaPredicted RBP11.75□□□□□ -0.53
SLIRP-211ENST00000557623 ATG14Q6ZNE5 492 aa11.75□□□□□ -0.53
SLIRP-211ENST00000557623 LANCL3Q6ZV70 420 aa11.75□□□□□ -0.53
SLIRP-211ENST00000557623 C7orf57Q8NEG2 295 aa11.75□□□□□ -0.53
SLIRP-211ENST00000557623 OR4F6Q8NGB9 312 aa11.75□□□□□ -0.53
SLIRP-211ENST00000557623 WDR20Q8TBZ3 569 aa11.75□□□□□ -0.53
SLIRP-211ENST00000557623 RDH11Q8TC12 318 aa11.75□□□□□ -0.53
SLIRP-211ENST00000557623 L3HYPDHQ96EM0 354 aa11.75□□□□□ -0.53
SLIRP-211ENST00000557623 PTCHD1Q96NR3 888 aa11.75□□□□□ -0.53
SLIRP-211ENST00000557623 CDK15Q96Q40 435 aa11.75□□□□□ -0.53
SLIRP-211ENST00000557623 FRG2BQ96QU4 278 aa11.75□□□□□ -0.53
SLIRP-211ENST00000557623 MTERF1Q99551 399 aaKnown RBP11.75□□□□□ -0.53
SLIRP-211ENST00000557623 LPAR4Q99677 370 aa11.75□□□□□ -0.53
SLIRP-211ENST00000557623 OR51B5Q9H339 312 aa11.75□□□□□ -0.53
SLIRP-211ENST00000557623 LYRM4Q9HD34 91 aa11.75□□□□□ -0.53
SLIRP-211ENST00000557623 MAP10Q9P2G4 905 aa11.75□□□□□ -0.53
SLIRP-211ENST00000557623 LGALS13Q9UHV8 139 aa11.75□□□□□ -0.53
SLIRP-211ENST00000557623 DAPP1Q9UN19 280 aa11.75□□□□□ -0.53
SLIRP-211ENST00000557623 BLACEA4D250 179 aa11.74□□□□□ -0.53
SLIRP-211ENST00000557623 SLC28A2O43868 658 aa11.74□□□□□ -0.53
SLIRP-211ENST00000557623 SEC24DO94855 1032 aaPredicted RBP11.74□□□□□ -0.53
SLIRP-211ENST00000557623 PROCP04070 461 aa11.74□□□□□ -0.53
SLIRP-211ENST00000557623 PRR35P0CG20 571 aa11.74□□□□□ -0.53
SLIRP-211ENST00000557623 HIST1H1TP22492 207 aaPredicted RBP11.74□□□□□ -0.53
SLIRP-211ENST00000557623 ATP5A1P25705 553 aaKnown RBP11.74□□□□□ -0.53
SLIRP-211ENST00000557623 CDH13P55290 713 aa11.74□□□□□ -0.53
SLIRP-211ENST00000557623 LIM2P55344 173 aa11.74□□□□□ -0.53
SLIRP-211ENST00000557623 HSD17B7P56937 341 aa11.74□□□□□ -0.53
SLIRP-211ENST00000557623 OR4D2P58180 307 aa11.74□□□□□ -0.53
SLIRP-211ENST00000557623 Q0VFX4 171 aa11.74□□□□□ -0.53
SLIRP-211ENST00000557623 EXT1Q16394 746 aa11.74□□□□□ -0.53
SLIRP-211ENST00000557623 UNC50Q53HI1 259 aa11.74□□□□□ -0.53
SLIRP-211ENST00000557623 SFT2D3Q587I9 215 aa11.74□□□□□ -0.53
SLIRP-211ENST00000557623 CRB2Q5IJ48 1285 aa11.74□□□□□ -0.53
SLIRP-211ENST00000557623 PLAG1Q6DJT9 500 aa11.74□□□□□ -0.53
SLIRP-211ENST00000557623 OR4C11Q6IEV9 310 aa11.74□□□□□ -0.53
SLIRP-211ENST00000557623 IGFL3Q6UXB1 125 aa11.74□□□□□ -0.53
SLIRP-211ENST00000557623 ZYG11AQ6WRX3 759 aa11.74□□□□□ -0.53
SLIRP-211ENST00000557623 PRICKLE2Q7Z3G6 844 aa11.74□□□□□ -0.53
SLIRP-211ENST00000557623 UBE3DQ7Z6J8 389 aa11.74□□□□□ -0.53
SLIRP-211ENST00000557623 TRABD2AQ86V40 505 aa11.74□□□□□ -0.53
SLIRP-211ENST00000557623 ZNF595Q8IYB9 648 aa11.74□□□□□ -0.53
SLIRP-211ENST00000557623 SHISA5Q8N114 240 aa11.74□□□□□ -0.53
SLIRP-211ENST00000557623 C4orf33Q8N1A6 199 aa11.74□□□□□ -0.53
SLIRP-211ENST00000557623 ZADH2Q8N4Q0 377 aa11.74□□□□□ -0.53
SLIRP-211ENST00000557623 ACOT4Q8N9L9 421 aa11.74□□□□□ -0.53
SLIRP-211ENST00000557623 CCDC63Q8NA47 563 aa11.74□□□□□ -0.53
SLIRP-211ENST00000557623 TRPC4APQ8TEL6 797 aa11.74□□□□□ -0.53
SLIRP-211ENST00000557623 IMMP1LQ96LU5 166 aa11.74□□□□□ -0.53
SLIRP-211ENST00000557623 TMEM237Q96Q45 408 aa11.74□□□□□ -0.53
SLIRP-211ENST00000557623 ZNF382Q96SR6 550 aa11.74□□□□□ -0.53
SLIRP-211ENST00000557623 SERPINI1Q99574 410 aa11.74□□□□□ -0.53
SLIRP-211ENST00000557623 MESP1Q9BRJ9 268 aa11.74□□□□□ -0.53
SLIRP-211ENST00000557623 TMEM109Q9BVC6 243 aa11.74□□□□□ -0.53
SLIRP-211ENST00000557623 IQCGQ9H095 443 aaKnown RBP11.74□□□□□ -0.53
SLIRP-211ENST00000557623 ELOVL6Q9H5J4 265 aa11.74□□□□□ -0.53
SLIRP-211ENST00000557623 EPS8L2Q9H6S3 715 aa11.74□□□□□ -0.53
SLIRP-211ENST00000557623 PRTFDC1Q9NRG1 225 aa11.74□□□□□ -0.53
SLIRP-211ENST00000557623 MKS1Q9NXB0 559 aa11.74□□□□□ -0.53
SLIRP-211ENST00000557623 MS4A12Q9NXJ0 267 aa11.74□□□□□ -0.53
SLIRP-211ENST00000557623 TRPS1Q9UHF7 1281 aa11.74□□□□□ -0.53
SLIRP-211ENST00000557623 EMCNQ9ULC0 261 aa11.74□□□□□ -0.53
SLIRP-211ENST00000557623 SNX6Q9UNH7 406 aa11.74□□□□□ -0.53
SLIRP-211ENST00000557623 PLAAQ9Y263 795 aa11.74□□□□□ -0.53
SLIRP-211ENST00000557623 OR2W5A6NFC9 320 aa11.73□□□□□ -0.53
SLIRP-211ENST00000557623 FOXO6A8MYZ6 492 aa11.73□□□□□ -0.53
SLIRP-211ENST00000557623 FAM227AF5H4B4 570 aa11.73□□□□□ -0.53
SLIRP-211ENST00000557623 G3V2L1 256 aa11.73□□□□□ -0.53
SLIRP-211ENST00000557623 H3BQF6 201 aa11.73□□□□□ -0.53
SLIRP-211ENST00000557623 SAP18O00422 153 aaKnown RBP11.73□□□□□ -0.53
SLIRP-211ENST00000557623 RTCAO00442 366 aaKnown RBP11.73□□□□□ -0.53
SLIRP-211ENST00000557623 PLIN3O60664 434 aa11.73□□□□□ -0.53
SLIRP-211ENST00000557623 SH3BGRLO75368 114 aa11.73□□□□□ -0.53
SLIRP-211ENST00000557623 SEMA3DO95025 777 aa11.73□□□□□ -0.53
SLIRP-211ENST00000557623 UQCRHP07919 91 aa11.73□□□□□ -0.53
SLIRP-211ENST00000557623 CASRP41180 1078 aa11.73□□□□□ -0.53
SLIRP-211ENST00000557623 ATRXP46100 2492 aa11.73□□□□□ -0.53
SLIRP-211ENST00000557623 NEK2P51955 445 aa11.73□□□□□ -0.53
SLIRP-211ENST00000557623 BTG2P78543 158 aa11.73□□□□□ -0.53
SLIRP-211ENST00000557623 BTBD16Q32M84 506 aa11.73□□□□□ -0.53
SLIRP-211ENST00000557623 PAPD4Q6PIY7 484 aaKnown RBP11.73□□□□□ -0.53
SLIRP-211ENST00000557623 ISLR2Q6UXK2 745 aa11.73□□□□□ -0.53
SLIRP-211ENST00000557623 ZNF793Q6ZN11 406 aa11.73□□□□□ -0.53
SLIRP-211ENST00000557623 RPS27LQ71UM5 84 aaKnown RBP11.73□□□□□ -0.53
SLIRP-211ENST00000557623 ZCCHC7Q8N3Z6 543 aaKnown RBP11.73□□□□□ -0.53
SLIRP-211ENST00000557623 RNF175Q8N4F7 328 aa11.73□□□□□ -0.53
SLIRP-211ENST00000557623 M1APQ8TC57 530 aa11.73□□□□□ -0.53
SLIRP-211ENST00000557623 TSLPQ969D9 159 aa11.73□□□□□ -0.53
SLIRP-211ENST00000557623 MTFMTQ96DP5 389 aaKnown RBP11.73□□□□□ -0.53
SLIRP-211ENST00000557623 APOPT1Q96IL0 206 aa11.73□□□□□ -0.53
SLIRP-211ENST00000557623 LMF1Q96S06 567 aa11.73□□□□□ -0.53
SLIRP-211ENST00000557623 PIEZO2Q9H5I5 2752 aa11.73□□□□□ -0.53
SLIRP-211ENST00000557623 NMRK1Q9NWW6 199 aa11.73□□□□□ -0.53
SLIRP-211ENST00000557623 AHSPQ9NZD4 102 aa11.73□□□□□ -0.53
SLIRP-211ENST00000557623 PHF11Q9UIL8 331 aa11.73□□□□□ -0.53
SLIRP-211ENST00000557623 IGKV3D-11A0A0A0MRZ8 115 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms