RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 LRRC8AQ8IWT6 810 aa13.07□□□□□ -0.32
SLIRP-210ENST00000557431 TMEM251Q8N6I4 163 aa13.07□□□□□ -0.32
SLIRP-210ENST00000557431 FAM45AQ8TCE6 357 aa13.07□□□□□ -0.32
SLIRP-210ENST00000557431 DOK4Q8TEW6 326 aa13.07□□□□□ -0.32
SLIRP-210ENST00000557431 ATL1Q8WXF7 558 aa13.07□□□□□ -0.32
SLIRP-210ENST00000557431 SLCO2A1Q92959 643 aa13.07□□□□□ -0.32
SLIRP-210ENST00000557431 GAL3ST3Q96A11 431 aa13.07□□□□□ -0.32
SLIRP-210ENST00000557431 ESAMQ96AP7 390 aa13.07□□□□□ -0.32
SLIRP-210ENST00000557431 MS4A6EQ96DS6 147 aa13.07□□□□□ -0.32
SLIRP-210ENST00000557431 SCYL1Q96KG9 808 aa13.07□□□□□ -0.32
SLIRP-210ENST00000557431 RASL10BQ96S79 203 aa13.07□□□□□ -0.32
SLIRP-210ENST00000557431 CNPPD1Q9BV87 410 aa13.07□□□□□ -0.32
SLIRP-210ENST00000557431 GRPEL1Q9HAV7 217 aa13.07□□□□□ -0.32
SLIRP-210ENST00000557431 CCM2LQ9NUG4 571 aaPredicted RBP13.07□□□□□ -0.32
SLIRP-210ENST00000557431 TRMT1Q9NXH9 659 aaKnown RBP13.07□□□□□ -0.32
SLIRP-210ENST00000557431 ASIC3Q9UHC3 531 aa13.07□□□□□ -0.32
SLIRP-210ENST00000557431 YARS2Q9Y2Z4 477 aaKnown RBP13.07□□□□□ -0.32
SLIRP-210ENST00000557431 VWA7Q9Y334 891 aa13.07□□□□□ -0.32
SLIRP-210ENST00000557431 FAM215AQ9Y5M1 114 aa13.07□□□□□ -0.32
SLIRP-210ENST00000557431 PSAT1Q9Y617 370 aa13.07□□□□□ -0.32
SLIRP-210ENST00000557431 A0A0G2JNJ9 132 aa13.06□□□□□ -0.32
SLIRP-210ENST00000557431 KLK8O60259 260 aa13.06□□□□□ -0.32
SLIRP-210ENST00000557431 PRAMEF4O60810 478 aa13.06□□□□□ -0.32
SLIRP-210ENST00000557431 LDB3O75112 727 aa13.06□□□□□ -0.32
SLIRP-210ENST00000557431 SH3BGRLO75368 114 aa13.06□□□□□ -0.32
SLIRP-210ENST00000557431 PIAS1O75925 651 aa13.06□□□□□ -0.32
SLIRP-210ENST00000557431 ZFAND5O76080 213 aa13.06□□□□□ -0.32
SLIRP-210ENST00000557431 ZWINTO95229 277 aa13.06□□□□□ -0.32
SLIRP-210ENST00000557431 CCL3P10147 92 aa13.06□□□□□ -0.32
SLIRP-210ENST00000557431 CD1EP15812 388 aa13.06□□□□□ -0.32
SLIRP-210ENST00000557431 ZNF37AP17032 561 aaPredicted RBP13.06□□□□□ -0.32
SLIRP-210ENST00000557431 ADH7P40394 386 aa13.06□□□□□ -0.32
SLIRP-210ENST00000557431 ELK3P41970 407 aa13.06□□□□□ -0.32
SLIRP-210ENST00000557431 BMPR2Q13873 1038 aa13.06□□□□□ -0.32
SLIRP-210ENST00000557431 PPP1R7Q15435 360 aa13.06□□□□□ -0.32
SLIRP-210ENST00000557431 TSNQ15631 228 aaKnown RBP13.06□□□□□ -0.32
SLIRP-210ENST00000557431 PRAMEF9Q5VWM5 478 aa13.06□□□□□ -0.32
SLIRP-210ENST00000557431 NIPAL1Q6NVV3 410 aa13.06□□□□□ -0.32
SLIRP-210ENST00000557431 ZNF662Q6ZS27 426 aa13.06□□□□□ -0.32
SLIRP-210ENST00000557431 KIAA0408Q6ZU52 694 aa13.06□□□□□ -0.32
SLIRP-210ENST00000557431 KLHDC8AQ8IYD2 350 aa13.06□□□□□ -0.32
SLIRP-210ENST00000557431 ZZZ3Q8IYH5 903 aa13.06□□□□□ -0.32
SLIRP-210ENST00000557431 ANKRD49Q8WVL7 239 aa13.06□□□□□ -0.32
SLIRP-210ENST00000557431 FAR2Q96K12 515 aa13.06□□□□□ -0.32
SLIRP-210ENST00000557431 QRFPRQ96P65 431 aa13.06□□□□□ -0.32
SLIRP-210ENST00000557431 OR8D2Q9GZM6 311 aa13.06□□□□□ -0.32
SLIRP-210ENST00000557431 DDX47Q9H0S4 455 aaKnown RBP13.06□□□□□ -0.32
SLIRP-210ENST00000557431 ZDHHC11Q9H8X9 412 aa13.06□□□□□ -0.32
SLIRP-210ENST00000557431 ADAP2Q9NPF8 381 aa13.06□□□□□ -0.32
SLIRP-210ENST00000557431 ALKBH4Q9NXW9 302 aa13.06□□□□□ -0.32
SLIRP-210ENST00000557431 TUBA8Q9NY65 449 aaPredicted RBP13.06□□□□□ -0.32
SLIRP-210ENST00000557431 Q9UFV3 132 aa13.06□□□□□ -0.32
SLIRP-210ENST00000557431 KCNE2Q9Y6J6 123 aa13.06□□□□□ -0.32
SLIRP-210ENST00000557431 ATP6AP2A0A1C7CYW4 349 aa13.05□□□□□ -0.32
SLIRP-210ENST00000557431 FOXO6A8MYZ6 492 aa13.05□□□□□ -0.32
SLIRP-210ENST00000557431 ACOT7O00154 380 aa13.05□□□□□ -0.32
SLIRP-210ENST00000557431 B3GALT2O43825 422 aa13.05□□□□□ -0.32
SLIRP-210ENST00000557431 ATP6AP2O75787 350 aa13.05□□□□□ -0.32
SLIRP-210ENST00000557431 ENO2P09104 434 aaPredicted RBP13.05□□□□□ -0.32
SLIRP-210ENST00000557431 C1GALT1C1LP0DN25 315 aa13.05□□□□□ -0.32
SLIRP-210ENST00000557431 GLI4P10075 376 aa13.05□□□□□ -0.32
SLIRP-210ENST00000557431 ACVR2AP27037 513 aa13.05□□□□□ -0.32
SLIRP-210ENST00000557431 LIM2P55344 173 aa13.05□□□□□ -0.32
SLIRP-210ENST00000557431 STXBP1P61764 594 aaKnown RBP13.05□□□□□ -0.32
SLIRP-210ENST00000557431 SLCO4C1Q6ZQN7 724 aa13.05□□□□□ -0.32
SLIRP-210ENST00000557431 MED12LQ86YW9 2145 aa13.05□□□□□ -0.32
SLIRP-210ENST00000557431 ANKMY2Q8IV38 441 aa13.05□□□□□ -0.32
SLIRP-210ENST00000557431 SPATA6LQ8N4H0 392 aa13.05□□□□□ -0.32
SLIRP-210ENST00000557431 GPATCH1Q9BRR8 931 aaKnown RBP13.05□□□□□ -0.32
SLIRP-210ENST00000557431 TTYH2Q9BSA4 534 aa13.05□□□□□ -0.32
SLIRP-210ENST00000557431 MYOTQ9UBF9 498 aa13.05□□□□□ -0.32
SLIRP-210ENST00000557431 PPIEQ9UNP9 301 aaKnown RBP13.05□□□□□ -0.32
SLIRP-210ENST00000557431 PPP2R2CQ9Y2T4 447 aa13.05□□□□□ -0.32
SLIRP-210ENST00000557431 HEATR5AQ86XA9 2040 aa13.05□□□□□ -0.32
SLIRP-210ENST00000557431 FAM95CA0A1B0GW59 222 aa13.04□□□□□ -0.32
SLIRP-210ENST00000557431 LRIT2A6NDA9 550 aa13.04□□□□□ -0.32
SLIRP-210ENST00000557431 KDM4EB2RXH2 506 aaPredicted RBP13.04□□□□□ -0.32
SLIRP-210ENST00000557431 PGRMC1O00264 195 aaKnown RBP13.04□□□□□ -0.32
SLIRP-210ENST00000557431 RTCAO00442 366 aaKnown RBP13.04□□□□□ -0.32
SLIRP-210ENST00000557431 CDK2AP1O14519 115 aa13.04□□□□□ -0.32
SLIRP-210ENST00000557431 GLSO94925 669 aaPredicted RBP13.04□□□□□ -0.32
SLIRP-210ENST00000557431 LRATO95237 230 aa13.04□□□□□ -0.32
SLIRP-210ENST00000557431 CD99P14209 185 aa13.04□□□□□ -0.32
SLIRP-210ENST00000557431 ENDOUP21128 410 aaKnown RBP13.04□□□□□ -0.32
SLIRP-210ENST00000557431 GMPRP36959 345 aa13.04□□□□□ -0.32
SLIRP-210ENST00000557431 PIGAP37287 484 aa13.04□□□□□ -0.32
SLIRP-210ENST00000557431 WNT3P56703 355 aa13.04□□□□□ -0.32
SLIRP-210ENST00000557431 HSD17B7P56937 341 aa13.04□□□□□ -0.32
SLIRP-210ENST00000557431 TAS2R39P59534 338 aa13.04□□□□□ -0.32
SLIRP-210ENST00000557431 TERF2Q15554 542 aa13.04□□□□□ -0.32
SLIRP-210ENST00000557431 CEBPEQ15744 281 aa13.04□□□□□ -0.32
SLIRP-210ENST00000557431 CES4AQ5XG92 561 aa13.04□□□□□ -0.32
SLIRP-210ENST00000557431 PAOXQ6QHF9 649 aa13.04□□□□□ -0.32
SLIRP-210ENST00000557431 TMIGD1Q6UXZ0 262 aa13.04□□□□□ -0.32
SLIRP-210ENST00000557431 B3GNT6Q6ZMB0 384 aa13.04□□□□□ -0.32
SLIRP-210ENST00000557431 FAM47EQ6ZV65 393 aa13.04□□□□□ -0.32
SLIRP-210ENST00000557431 ACAD11Q709F0 780 aa13.04□□□□□ -0.32
SLIRP-210ENST00000557431 FRA10AC1Q70Z53 315 aa13.04□□□□□ -0.32
SLIRP-210ENST00000557431 TRILQ7L0X0 811 aa13.04□□□□□ -0.32
SLIRP-210ENST00000557431 WDR53Q7Z5U6 358 aaPredicted RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms