RNA–Protein interactions for RNA: ENST00000557348.5

SHMT2-229, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,659 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-229ENST00000557348 YIPF2Q9BWQ6 316 aa12.07□□□□□ -0.48
SHMT2-229ENST00000557348 TRIM8Q9BZR9 551 aa12.07□□□□□ -0.48
SHMT2-229ENST00000557348 SPNS1Q9H2V7 528 aa12.07□□□□□ -0.48
SHMT2-229ENST00000557348 LIN28AQ9H9Z2 209 aaKnown RBP12.07□□□□□ -0.48
SHMT2-229ENST00000557348 CPNE5Q9HCH3 593 aa12.07□□□□□ -0.48
SHMT2-229ENST00000557348 CUEDC1Q9NWM3 386 aaPredicted RBP12.07□□□□□ -0.48
SHMT2-229ENST00000557348 SH3BP4Q9P0V3 963 aa12.07□□□□□ -0.48
SHMT2-229ENST00000557348 RPS6KA6Q9UK32 745 aa12.07□□□□□ -0.48
SHMT2-229ENST00000557348 CDC14AQ9UNH5 594 aa12.07□□□□□ -0.48
SHMT2-229ENST00000557348 KIR2DS5A0A0G2JLQ3 304 aa12.06□□□□□ -0.48
SHMT2-229ENST00000557348 A0A0G2JNG1 304 aa12.06□□□□□ -0.48
SHMT2-229ENST00000557348 OR52A4PA6NMU1 304 aa12.06□□□□□ -0.48
SHMT2-229ENST00000557348 KIR2DS3K7RE56 304 aa12.06□□□□□ -0.48
SHMT2-229ENST00000557348 NDUFS4O43181 175 aa12.06□□□□□ -0.48
SHMT2-229ENST00000557348 PRICKLE3O43900 615 aaPredicted RBP12.06□□□□□ -0.48
SHMT2-229ENST00000557348 GPR37L1O60883 481 aa12.06□□□□□ -0.48
SHMT2-229ENST00000557348 KLK1P06870 262 aa12.06□□□□□ -0.48
SHMT2-229ENST00000557348 FOSL2P15408 326 aa12.06□□□□□ -0.48
SHMT2-229ENST00000557348 NCK1P16333 377 aa12.06□□□□□ -0.48
SHMT2-229ENST00000557348 EIF2B2P49770 351 aaKnown RBP12.06□□□□□ -0.48
SHMT2-229ENST00000557348 GZMMP51124 257 aa12.06□□□□□ -0.48
SHMT2-229ENST00000557348 MAPK12P53778 367 aa12.06□□□□□ -0.48
SHMT2-229ENST00000557348 TAS2R50P59544 299 aa12.06□□□□□ -0.48
SHMT2-229ENST00000557348 C2orf80Q0P641 193 aa12.06□□□□□ -0.48
SHMT2-229ENST00000557348 CDC20Q12834 499 aa12.06□□□□□ -0.48
SHMT2-229ENST00000557348 FADDQ13158 208 aa12.06□□□□□ -0.48
SHMT2-229ENST00000557348 PMS2P3Q13401 168 aa12.06□□□□□ -0.48
SHMT2-229ENST00000557348 KRR1Q13601 381 aaKnown RBP12.06□□□□□ -0.48
SHMT2-229ENST00000557348 KIR2DS5Q14953 304 aa12.06□□□□□ -0.48
SHMT2-229ENST00000557348 TEAD4Q15561 434 aa12.06□□□□□ -0.48
SHMT2-229ENST00000557348 GPR107Q5VW38 600 aa12.06□□□□□ -0.48
SHMT2-229ENST00000557348 SLX4IPQ5VYV7 408 aa12.06□□□□□ -0.48
SHMT2-229ENST00000557348 ADNP2Q6IQ32 1131 aa12.06□□□□□ -0.48
SHMT2-229ENST00000557348 Q6ZSR6 202 aa12.06□□□□□ -0.48
SHMT2-229ENST00000557348 KCTD8Q6ZWB6 473 aa12.06□□□□□ -0.48
SHMT2-229ENST00000557348 ADCK2Q7Z695 626 aa12.06□□□□□ -0.48
SHMT2-229ENST00000557348 C2orf73Q8N5S3 287 aaPredicted RBP12.06□□□□□ -0.48
SHMT2-229ENST00000557348 ZNF740Q8NDX6 193 aa12.06□□□□□ -0.48
SHMT2-229ENST00000557348 OR2L3Q8NG85 312 aa12.06□□□□□ -0.48
SHMT2-229ENST00000557348 CHAC2Q8WUX2 184 aa12.06□□□□□ -0.48
SHMT2-229ENST00000557348 TOE1Q96GM8 510 aaKnown RBP12.06□□□□□ -0.48
SHMT2-229ENST00000557348 DCUN1D5Q9BTE7 237 aa12.06□□□□□ -0.48
SHMT2-229ENST00000557348 NEUROD4Q9HD90 331 aa12.06□□□□□ -0.48
SHMT2-229ENST00000557348 POT1Q9NUX5 634 aa12.06□□□□□ -0.48
SHMT2-229ENST00000557348 DCAF13Q9NV06 445 aaKnown RBP12.06□□□□□ -0.48
SHMT2-229ENST00000557348 WSB2Q9NYS7 404 aaPredicted RBP12.06□□□□□ -0.48
SHMT2-229ENST00000557348 GMPR2Q9P2T1 348 aaKnown RBP12.06□□□□□ -0.48
SHMT2-229ENST00000557348 SPASTQ9UBP0 616 aa12.06□□□□□ -0.48
SHMT2-229ENST00000557348 TBC1D29Q9UFV1 150 aa12.06□□□□□ -0.48
SHMT2-229ENST00000557348 IFT52Q9Y366 437 aa12.06□□□□□ -0.48
SHMT2-229ENST00000557348 ENTPD2Q9Y5L3 495 aa12.06□□□□□ -0.48
SHMT2-229ENST00000557348 NUMA1Q14980 2115 aa12.06□□□□□ -0.48
SHMT2-229ENST00000557348 MYOCOSA0A1B0GUC4 107 aa12.06□□□□□ -0.48
SHMT2-229ENST00000557348 A0A1W2PPW3 197 aa12.06□□□□□ -0.48
SHMT2-229ENST00000557348 A6NCN8 305 aa12.06□□□□□ -0.48
SHMT2-229ENST00000557348 DLGAP1O14490 977 aa12.06□□□□□ -0.48
SHMT2-229ENST00000557348 PLPP1O14494 284 aa12.06□□□□□ -0.48
SHMT2-229ENST00000557348 SOCS2O14508 198 aa12.06□□□□□ -0.48
SHMT2-229ENST00000557348 AQP9O43315 295 aa12.06□□□□□ -0.48
SHMT2-229ENST00000557348 CREG1O75629 220 aa12.06□□□□□ -0.48
SHMT2-229ENST00000557348 CPSF4O95639 269 aaKnown RBP12.06□□□□□ -0.48
SHMT2-229ENST00000557348 KRT75O95678 551 aa12.06□□□□□ -0.48
SHMT2-229ENST00000557348 IGHV4-34P06331 123 aa12.06□□□□□ -0.48
SHMT2-229ENST00000557348 DRD2P14416 443 aa12.06□□□□□ -0.48
SHMT2-229ENST00000557348 ENGP17813 658 aa12.06□□□□□ -0.48
SHMT2-229ENST00000557348 DDCP20711 480 aa12.06□□□□□ -0.48
SHMT2-229ENST00000557348 RXRGP48443 463 aa12.06□□□□□ -0.48
SHMT2-229ENST00000557348 PCYT1AP49585 367 aa12.06□□□□□ -0.48
SHMT2-229ENST00000557348 RPS15AP62244 130 aaKnown RBP12.06□□□□□ -0.48
SHMT2-229ENST00000557348 YBX1P67809 324 aaKnown RBP12.06□□□□□ -0.48
SHMT2-229ENST00000557348 ADARB1P78563 741 aaKnown RBP12.06□□□□□ -0.48
SHMT2-229ENST00000557348 VAC14Q08AM6 782 aa12.06□□□□□ -0.48
SHMT2-229ENST00000557348 RBBP4Q09028 425 aa12.06□□□□□ -0.48
SHMT2-229ENST00000557348 ELOAQ14241 798 aaKnown RBP12.06□□□□□ -0.48
SHMT2-229ENST00000557348 SF1Q15637 639 aaKnown RBP12.06□□□□□ -0.48
SHMT2-229ENST00000557348 ALG11Q2TAA5 492 aa12.06□□□□□ -0.48
SHMT2-229ENST00000557348 TTC23Q5W5X9 447 aa12.06□□□□□ -0.48
SHMT2-229ENST00000557348 GPR155Q7Z3F1 870 aa12.06□□□□□ -0.48
SHMT2-229ENST00000557348 SLC30A8Q8IWU4 369 aa12.06□□□□□ -0.48
SHMT2-229ENST00000557348 TRIM48Q8IWZ4 208 aa12.06□□□□□ -0.48
SHMT2-229ENST00000557348 CBR4Q8N4T8 237 aa12.06□□□□□ -0.48
SHMT2-229ENST00000557348 ANKRD53Q8N9V6 530 aa12.06□□□□□ -0.48
SHMT2-229ENST00000557348 OR4A15Q8NGL6 344 aa12.06□□□□□ -0.48
SHMT2-229ENST00000557348 HDAC2Q92769 488 aaKnown RBP12.06□□□□□ -0.48
SHMT2-229ENST00000557348 TAMM41Q96BW9 452 aa12.06□□□□□ -0.48
SHMT2-229ENST00000557348 AURKBQ96GD4 344 aaPredicted RBP12.06□□□□□ -0.48
SHMT2-229ENST00000557348 FAIM2Q9BWQ8 316 aa12.06□□□□□ -0.48
SHMT2-229ENST00000557348 CHID1Q9BWS9 393 aa12.06□□□□□ -0.48
SHMT2-229ENST00000557348 SRMSQ9H3Y6 488 aa12.06□□□□□ -0.48
SHMT2-229ENST00000557348 IKZF5Q9H5V7 419 aa12.06□□□□□ -0.48
SHMT2-229ENST00000557348 DDX31Q9H8H2 851 aaKnown RBP12.06□□□□□ -0.48
SHMT2-229ENST00000557348 SP140LQ9H930 580 aa12.06□□□□□ -0.48
SHMT2-229ENST00000557348 TPT1P8Q9HAU6 139 aa12.06□□□□□ -0.48
SHMT2-229ENST00000557348 GPR27Q9NS67 375 aa12.06□□□□□ -0.48
SHMT2-229ENST00000557348 EHD3Q9NZN3 535 aa12.06□□□□□ -0.48
SHMT2-229ENST00000557348 WNT16Q9UBV4 365 aa12.06□□□□□ -0.48
SHMT2-229ENST00000557348 CYP8B1Q9UNU6 501 aa12.06□□□□□ -0.48
SHMT2-229ENST00000557348 PLEKHM1Q9Y4G2 1056 aa12.06□□□□□ -0.48
SHMT2-229ENST00000557348 A0A1W2PPC4 97 aa12.05□□□□□ -0.48
SHMT2-229ENST00000557348 C1orf226A1L170 272 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms