RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 H3BQF6 201 aa10.04□□□□□ -0.8
LINC00239-201ENST00000556973 RTCAO00442 366 aaKnown RBP10.04□□□□□ -0.8
LINC00239-201ENST00000556973 CYR61O00622 381 aa10.04□□□□□ -0.8
LINC00239-201ENST00000556973 PLPP1O14494 284 aa10.04□□□□□ -0.8
LINC00239-201ENST00000556973 DPM1O60762 260 aa10.04□□□□□ -0.8
LINC00239-201ENST00000556973 CTNSO60931 367 aa10.04□□□□□ -0.8
LINC00239-201ENST00000556973 ERLIN1O75477 346 aa10.04□□□□□ -0.8
LINC00239-201ENST00000556973 SEC24DO94855 1032 aaPredicted RBP10.04□□□□□ -0.8
LINC00239-201ENST00000556973 OR4F21O95013 312 aa10.04□□□□□ -0.8
LINC00239-201ENST00000556973 PRR35P0CG20 571 aa10.04□□□□□ -0.8
LINC00239-201ENST00000556973 CERS1P27544 350 aa10.04□□□□□ -0.8
LINC00239-201ENST00000556973 SSR2P43308 183 aa10.04□□□□□ -0.8
LINC00239-201ENST00000556973 NAGLUP54802 743 aa10.04□□□□□ -0.8
LINC00239-201ENST00000556973 PKNOX1P55347 436 aa10.04□□□□□ -0.8
LINC00239-201ENST00000556973 OR4D2P58180 307 aa10.04□□□□□ -0.8
LINC00239-201ENST00000556973 LCP2Q13094 533 aa10.04□□□□□ -0.8
LINC00239-201ENST00000556973 SLC13A2Q13183 592 aa10.04□□□□□ -0.8
LINC00239-201ENST00000556973 SLAMF1Q13291 335 aa10.04□□□□□ -0.8
LINC00239-201ENST00000556973 EXT1Q16394 746 aa10.04□□□□□ -0.8
LINC00239-201ENST00000556973 SFT2D3Q587I9 215 aa10.04□□□□□ -0.8
LINC00239-201ENST00000556973 LIPMQ5VYY2 423 aa10.04□□□□□ -0.8
LINC00239-201ENST00000556973 PLAG1Q6DJT9 500 aa10.04□□□□□ -0.8
LINC00239-201ENST00000556973 LETMD1Q6P1Q0 360 aa10.04□□□□□ -0.8
LINC00239-201ENST00000556973 IGFL3Q6UXB1 125 aa10.04□□□□□ -0.8
LINC00239-201ENST00000556973 ZNF793Q6ZN11 406 aa10.04□□□□□ -0.8
LINC00239-201ENST00000556973 GPRIN3Q6ZVF9 776 aa10.04□□□□□ -0.8
LINC00239-201ENST00000556973 SRRM1Q8IYB3 904 aaKnown RBP10.04□□□□□ -0.8
LINC00239-201ENST00000556973 ZCCHC7Q8N3Z6 543 aaKnown RBP10.04□□□□□ -0.8
LINC00239-201ENST00000556973 CCNYL1Q8N7R7 359 aa10.04□□□□□ -0.8
LINC00239-201ENST00000556973 M1APQ8TC57 530 aa10.04□□□□□ -0.8
LINC00239-201ENST00000556973 SELENOMQ8WWX9 145 aa10.04□□□□□ -0.8
LINC00239-201ENST00000556973 TM9SF4Q92544 642 aa10.04□□□□□ -0.8
LINC00239-201ENST00000556973 APOPT1Q96IL0 206 aa10.04□□□□□ -0.8
LINC00239-201ENST00000556973 LMF1Q96S06 567 aa10.04□□□□□ -0.8
LINC00239-201ENST00000556973 ZNF382Q96SR6 550 aa10.04□□□□□ -0.8
LINC00239-201ENST00000556973 LPAR4Q99677 370 aa10.04□□□□□ -0.8
LINC00239-201ENST00000556973 GSTO2Q9H4Y5 243 aa10.04□□□□□ -0.8
LINC00239-201ENST00000556973 BRF2Q9HAW0 419 aa10.04□□□□□ -0.8
LINC00239-201ENST00000556973 NECTIN3Q9NQS3 549 aa10.04□□□□□ -0.8
LINC00239-201ENST00000556973 PRTFDC1Q9NRG1 225 aa10.04□□□□□ -0.8
LINC00239-201ENST00000556973 NMRK1Q9NWW6 199 aa10.04□□□□□ -0.8
LINC00239-201ENST00000556973 MS4A12Q9NXJ0 267 aa10.04□□□□□ -0.8
LINC00239-201ENST00000556973 SENP1Q9P0U3 644 aa10.04□□□□□ -0.8
LINC00239-201ENST00000556973 ZNF225Q9UK10 706 aa10.04□□□□□ -0.8
LINC00239-201ENST00000556973 IGKV3D-11A0A0A0MRZ8 115 aa10.03□□□□□ -0.8
LINC00239-201ENST00000556973 IGHV3-20A0A0C4DH32 117 aa10.03□□□□□ -0.8
LINC00239-201ENST00000556973 TCRBV16S1A1N1A0A5B0 115 aa10.03□□□□□ -0.8
LINC00239-201ENST00000556973 CCDC151A5D8V7 595 aa10.03□□□□□ -0.8
LINC00239-201ENST00000556973 RGS16O15492 202 aaPredicted RBP10.03□□□□□ -0.8
LINC00239-201ENST00000556973 TRIM13O60858 407 aa10.03□□□□□ -0.8
LINC00239-201ENST00000556973 ULK1O75385 1050 aa10.03□□□□□ -0.8
LINC00239-201ENST00000556973 SEMA3DO95025 777 aa10.03□□□□□ -0.8
LINC00239-201ENST00000556973 ETHE1O95571 254 aa10.03□□□□□ -0.8
LINC00239-201ENST00000556973 ESRRBO95718 433 aa10.03□□□□□ -0.8
LINC00239-201ENST00000556973 PDYNP01213 254 aa10.03□□□□□ -0.8
LINC00239-201ENST00000556973 KRT6AP02538 564 aa10.03□□□□□ -0.8
LINC00239-201ENST00000556973 KRT6BP04259 564 aa10.03□□□□□ -0.8
LINC00239-201ENST00000556973 ENO1P06733 434 aaKnown RBP10.03□□□□□ -0.8
LINC00239-201ENST00000556973 MAOAP21397 527 aa10.03□□□□□ -0.8
LINC00239-201ENST00000556973 CPN2P22792 545 aa10.03□□□□□ -0.8
LINC00239-201ENST00000556973 TLX1P31314 330 aaPredicted RBP10.03□□□□□ -0.8
LINC00239-201ENST00000556973 BSGP35613 385 aa10.03□□□□□ -0.8
LINC00239-201ENST00000556973 KRT6CP48668 564 aa10.03□□□□□ -0.8
LINC00239-201ENST00000556973 ZNF33BQ06732 778 aa10.03□□□□□ -0.8
LINC00239-201ENST00000556973 ZNF844Q08AG5 666 aa10.03□□□□□ -0.8
LINC00239-201ENST00000556973 ASPHQ12797 758 aa10.03□□□□□ -0.8
LINC00239-201ENST00000556973 BTBD16Q32M84 506 aa10.03□□□□□ -0.8
LINC00239-201ENST00000556973 KRT71Q3SY84 523 aa10.03□□□□□ -0.8
LINC00239-201ENST00000556973 CRB2Q5IJ48 1285 aa10.03□□□□□ -0.8
LINC00239-201ENST00000556973 CFAP157Q5JU67 520 aa10.03□□□□□ -0.8
LINC00239-201ENST00000556973 PAPD4Q6PIY7 484 aaKnown RBP10.03□□□□□ -0.8
LINC00239-201ENST00000556973 CYP20A1Q6UW02 462 aa10.03□□□□□ -0.8
LINC00239-201ENST00000556973 IGFL2Q6UWQ7 119 aa10.03□□□□□ -0.8
LINC00239-201ENST00000556973 ISLR2Q6UXK2 745 aa10.03□□□□□ -0.8
LINC00239-201ENST00000556973 ATG14Q6ZNE5 492 aa10.03□□□□□ -0.8
LINC00239-201ENST00000556973 GPR180Q86V85 440 aa10.03□□□□□ -0.8
LINC00239-201ENST00000556973 SCUBE1Q8IWY4 988 aa10.03□□□□□ -0.8
LINC00239-201ENST00000556973 ZADH2Q8N4Q0 377 aa10.03□□□□□ -0.8
LINC00239-201ENST00000556973 CDYL2Q8N8U2 506 aa10.03□□□□□ -0.8
LINC00239-201ENST00000556973 FAM47BQ8NA70 645 aa10.03□□□□□ -0.8
LINC00239-201ENST00000556973 METTL6Q8TCB7 284 aa10.03□□□□□ -0.8
LINC00239-201ENST00000556973 PSMF1Q92530 271 aa10.03□□□□□ -0.8
LINC00239-201ENST00000556973 TSLPQ969D9 159 aa10.03□□□□□ -0.8
LINC00239-201ENST00000556973 DOCK10Q96BY6 2186 aa10.03□□□□□ -0.8
LINC00239-201ENST00000556973 ZIM3Q96PE6 472 aa10.03□□□□□ -0.8
LINC00239-201ENST00000556973 MAPKAP1Q9BPZ7 522 aa10.03□□□□□ -0.8
LINC00239-201ENST00000556973 WDR77Q9BQA1 342 aaPredicted RBP10.03□□□□□ -0.8
LINC00239-201ENST00000556973 SLC29A3Q9BZD2 475 aa10.03□□□□□ -0.8
LINC00239-201ENST00000556973 C12orf65Q9H3J6 166 aaKnown RBP10.03□□□□□ -0.8
LINC00239-201ENST00000556973 DDX31Q9H8H2 851 aaKnown RBP10.03□□□□□ -0.8
LINC00239-201ENST00000556973 MID1IP1Q9NPA3 183 aa10.03□□□□□ -0.8
LINC00239-201ENST00000556973 FARSBQ9NSD9 589 aaKnown RBP10.03□□□□□ -0.8
LINC00239-201ENST00000556973 PHF11Q9UIL8 331 aa10.03□□□□□ -0.8
LINC00239-201ENST00000556973 ADAM29Q9UKF5 820 aa10.03□□□□□ -0.8
LINC00239-201ENST00000556973 FBXW2Q9UKT8 454 aa10.03□□□□□ -0.8
LINC00239-201ENST00000556973 A0A0A6YYD5 115 aa10.02□□□□□ -0.81
LINC00239-201ENST00000556973 MANBAO00462 879 aa10.02□□□□□ -0.81
LINC00239-201ENST00000556973 PROM1O43490 865 aa10.02□□□□□ -0.81
LINC00239-201ENST00000556973 SPAG7O75391 227 aa10.02□□□□□ -0.81
LINC00239-201ENST00000556973 HSD3B1P14060 373 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms