RNA–Protein interactions for RNA: ENST00000556833.1

CHD8-211, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-211ENST00000556833 DOK4Q8TEW6 326 aa13.73□□□□□ -0.21
CHD8-211ENST00000556833 ASB5Q8WWX0 329 aa13.73□□□□□ -0.21
CHD8-211ENST00000556833 ESAMQ96AP7 390 aa13.73□□□□□ -0.21
CHD8-211ENST00000556833 MS4A6EQ96DS6 147 aa13.73□□□□□ -0.21
CHD8-211ENST00000556833 ZNF559Q9BR84 538 aa13.73□□□□□ -0.21
CHD8-211ENST00000556833 OR8D2Q9GZM6 311 aa13.73□□□□□ -0.21
CHD8-211ENST00000556833 KCNJ16Q9NPI9 418 aa13.73□□□□□ -0.21
CHD8-211ENST00000556833 CLDN16Q9Y5I7 305 aa13.73□□□□□ -0.21
CHD8-211ENST00000556833 FREM3P0C091 2139 aa13.72□□□□□ -0.21
CHD8-211ENST00000556833 ZFAND5O76080 213 aa13.72□□□□□ -0.21
CHD8-211ENST00000556833 CELA3AP09093 270 aa13.72□□□□□ -0.21
CHD8-211ENST00000556833 C1GALT1C1LP0DN25 315 aa13.72□□□□□ -0.21
CHD8-211ENST00000556833 MAGEA5P43359 124 aa13.72□□□□□ -0.21
CHD8-211ENST00000556833 DNASE1L1P49184 302 aa13.72□□□□□ -0.21
CHD8-211ENST00000556833 TAS2R39P59534 338 aa13.72□□□□□ -0.21
CHD8-211ENST00000556833 TFF3Q07654 80 aa13.72□□□□□ -0.21
CHD8-211ENST00000556833 FASTKD3Q14CZ7 662 aaKnown RBP13.72□□□□□ -0.21
CHD8-211ENST00000556833 TMIGD1Q6UXZ0 262 aa13.72□□□□□ -0.21
CHD8-211ENST00000556833 SLCO4C1Q6ZQN7 724 aa13.72□□□□□ -0.21
CHD8-211ENST00000556833 VN1R5Q7Z5H4 357 aa13.72□□□□□ -0.21
CHD8-211ENST00000556833 KLHL7Q8IXQ5 586 aa13.72□□□□□ -0.21
CHD8-211ENST00000556833 ARMC10Q8N2F6 343 aa13.72□□□□□ -0.21
CHD8-211ENST00000556833 SNX31Q8N9S9 440 aa13.72□□□□□ -0.21
CHD8-211ENST00000556833 LILRB4Q8NHJ6 448 aa13.72□□□□□ -0.21
CHD8-211ENST00000556833 EXT2Q93063 718 aa13.72□□□□□ -0.21
CHD8-211ENST00000556833 CAPZA3Q96KX2 299 aa13.72□□□□□ -0.21
CHD8-211ENST00000556833 RASL10BQ96S79 203 aa13.72□□□□□ -0.21
CHD8-211ENST00000556833 TTTY12Q9BZ98 90 aa13.72□□□□□ -0.21
CHD8-211ENST00000556833 TRIM31Q9BZY9 425 aa13.72□□□□□ -0.21
CHD8-211ENST00000556833 COPS7BQ9H9Q2 264 aaPredicted RBP13.72□□□□□ -0.21
CHD8-211ENST00000556833 ADAP2Q9NPF8 381 aa13.72□□□□□ -0.21
CHD8-211ENST00000556833 ALKBH4Q9NXW9 302 aa13.72□□□□□ -0.21
CHD8-211ENST00000556833 CTNNAL1Q9UBT7 734 aa13.72□□□□□ -0.21
CHD8-211ENST00000556833 YARS2Q9Y2Z4 477 aaKnown RBP13.72□□□□□ -0.21
CHD8-211ENST00000556833 OARD1Q9Y530 152 aa13.72□□□□□ -0.21
CHD8-211ENST00000556833 ARHGAP21Q5T5U3 1957 aa13.71□□□□□ -0.21
CHD8-211ENST00000556833 ATP6AP2A0A1C7CYW4 349 aa13.71□□□□□ -0.21
CHD8-211ENST00000556833 LRIT2A6NDA9 550 aa13.71□□□□□ -0.21
CHD8-211ENST00000556833 ACOT7O00154 380 aa13.71□□□□□ -0.21
CHD8-211ENST00000556833 CLDN4O14493 209 aa13.71□□□□□ -0.21
CHD8-211ENST00000556833 ZNF354AO60765 605 aaPredicted RBP13.71□□□□□ -0.21
CHD8-211ENST00000556833 LDB3O75112 727 aa13.71□□□□□ -0.21
CHD8-211ENST00000556833 H2AFYO75367 372 aaKnown RBP13.71□□□□□ -0.21
CHD8-211ENST00000556833 ATP6AP2O75787 350 aa13.71□□□□□ -0.21
CHD8-211ENST00000556833 IGFBP2P18065 325 aa13.71□□□□□ -0.21
CHD8-211ENST00000556833 TNNI3P19429 210 aa13.71□□□□□ -0.21
CHD8-211ENST00000556833 MSX1P28360 303 aa13.71□□□□□ -0.21
CHD8-211ENST00000556833 GPR143P51810 404 aa13.71□□□□□ -0.21
CHD8-211ENST00000556833 HK2P52789 917 aa13.71□□□□□ -0.21
CHD8-211ENST00000556833 LIM2P55344 173 aa13.71□□□□□ -0.21
CHD8-211ENST00000556833 GXYLT1Q4G148 440 aa13.71□□□□□ -0.21
CHD8-211ENST00000556833 SPNS3Q6ZMD2 512 aa13.71□□□□□ -0.21
CHD8-211ENST00000556833 ZC3HC1Q86WB0 502 aaKnown RBP13.71□□□□□ -0.21
CHD8-211ENST00000556833 DMRTC2Q8IXT2 367 aaPredicted RBP13.71□□□□□ -0.21
CHD8-211ENST00000556833 SLCO2A1Q92959 643 aa13.71□□□□□ -0.21
CHD8-211ENST00000556833 SCYL1Q96KG9 808 aa13.71□□□□□ -0.21
CHD8-211ENST00000556833 RUNDC3BQ96NL0 473 aa13.71□□□□□ -0.21
CHD8-211ENST00000556833 QRFPRQ96P65 431 aa13.71□□□□□ -0.21
CHD8-211ENST00000556833 F2RL3Q96RI0 385 aa13.71□□□□□ -0.21
CHD8-211ENST00000556833 SMC6Q96SB8 1091 aa13.71□□□□□ -0.21
CHD8-211ENST00000556833 TREX2Q9BQ50 279 aaPredicted RBP13.71□□□□□ -0.21
CHD8-211ENST00000556833 TMEM79Q9BSE2 394 aa13.71□□□□□ -0.21
CHD8-211ENST00000556833 NAT9Q9BTE0 207 aa13.71□□□□□ -0.21
CHD8-211ENST00000556833 CNPPD1Q9BV87 410 aa13.71□□□□□ -0.21
CHD8-211ENST00000556833 REXO4Q9GZR2 422 aaKnown RBP13.71□□□□□ -0.21
CHD8-211ENST00000556833 CAB39LQ9H9S4 337 aa13.71□□□□□ -0.21
CHD8-211ENST00000556833 WWOXQ9NZC7 414 aa13.71□□□□□ -0.21
CHD8-211ENST00000556833 CLCA3PQ9Y6N3 262 aa13.71□□□□□ -0.21
CHD8-211ENST00000556833 PRRC2AP48634 2157 aaKnown RBP13.71□□□□□ -0.22
CHD8-211ENST00000556833 NINQ8N4C6 2090 aa13.7□□□□□ -0.22
CHD8-211ENST00000556833 ANKDD1BA6NHY2 528 aa13.7□□□□□ -0.22
CHD8-211ENST00000556833 RTCAO00442 366 aaKnown RBP13.7□□□□□ -0.22
CHD8-211ENST00000556833 PRAMEF4O60810 478 aa13.7□□□□□ -0.22
CHD8-211ENST00000556833 LRATO95237 230 aa13.7□□□□□ -0.22
CHD8-211ENST00000556833 TBX6O95947 436 aaPredicted RBP13.7□□□□□ -0.22
CHD8-211ENST00000556833 GNAZP19086 355 aa13.7□□□□□ -0.22
CHD8-211ENST00000556833 GMPRP36959 345 aa13.7□□□□□ -0.22
CHD8-211ENST00000556833 HSPA7P48741 367 aa13.7□□□□□ -0.22
CHD8-211ENST00000556833 HSD17B7P56937 341 aa13.7□□□□□ -0.22
CHD8-211ENST00000556833 STX4Q12846 297 aa13.7□□□□□ -0.22
CHD8-211ENST00000556833 TERF2Q15554 542 aa13.7□□□□□ -0.22
CHD8-211ENST00000556833 PRAMEF9Q5VWM5 478 aa13.7□□□□□ -0.22
CHD8-211ENST00000556833 TRIM40Q6P9F5 258 aa13.7□□□□□ -0.22
CHD8-211ENST00000556833 HSDL2Q6YN16 418 aa13.7□□□□□ -0.22
CHD8-211ENST00000556833 FAM47EQ6ZV65 393 aa13.7□□□□□ -0.22
CHD8-211ENST00000556833 GALNT7Q86SF2 657 aa13.7□□□□□ -0.22
CHD8-211ENST00000556833 PDIK1LQ8N165 341 aa13.7□□□□□ -0.22
CHD8-211ENST00000556833 NKAPQ8N5F7 415 aaKnown RBP13.7□□□□□ -0.22
CHD8-211ENST00000556833 TMEM251Q8N6I4 163 aa13.7□□□□□ -0.22
CHD8-211ENST00000556833 ACTRT1Q8TDG2 376 aa13.7□□□□□ -0.22
CHD8-211ENST00000556833 RHBDF1Q96CC6 855 aa13.7□□□□□ -0.22
CHD8-211ENST00000556833 PDLIM5Q96HC4 596 aaKnown RBP13.7□□□□□ -0.22
CHD8-211ENST00000556833 ALOXE3Q9BYJ1 711 aa13.7□□□□□ -0.22
CHD8-211ENST00000556833 EXO5Q9H790 373 aa13.7□□□□□ -0.22
CHD8-211ENST00000556833 CLK4Q9HAZ1 481 aaKnown RBP13.7□□□□□ -0.22
CHD8-211ENST00000556833 SEMA4BQ9NPR2 832 aaPredicted RBP13.7□□□□□ -0.22
CHD8-211ENST00000556833 PLSCR2Q9NRY7 297 aa13.7□□□□□ -0.22
CHD8-211ENST00000556833 MYOTQ9UBF9 498 aa13.7□□□□□ -0.22
CHD8-211ENST00000556833 CORO1CQ9ULV4 474 aaPredicted RBP13.7□□□□□ -0.22
CHD8-211ENST00000556833 MRPS33Q9Y291 106 aaKnown RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms