RNA–Protein interactions for RNA: ENST00000556765.1

TRAPPC6B-206, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 3

Gene TRAPPC6B, Length 664 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-206ENST00000556765 PSMG1O95456 288 aa13.57□□□□□ -0.24
TRAPPC6B-206ENST00000556765 HSD17B1P14061 328 aa13.57□□□□□ -0.24
TRAPPC6B-206ENST00000556765 CMPK1P30085 196 aa13.57□□□□□ -0.24
TRAPPC6B-206ENST00000556765 HNRNPH1P31943 449 aaKnown RBP13.57□□□□□ -0.24
TRAPPC6B-206ENST00000556765 ZFP36L2P47974 494 aaKnown RBP13.57□□□□□ -0.24
TRAPPC6B-206ENST00000556765 MAP7Q14244 749 aa13.57□□□□□ -0.24
TRAPPC6B-206ENST00000556765 TLR1Q15399 786 aa13.57□□□□□ -0.24
TRAPPC6B-206ENST00000556765 PHF19Q5T6S3 580 aa13.57□□□□□ -0.24
TRAPPC6B-206ENST00000556765 SUSD1Q6UWL2 747 aa13.57□□□□□ -0.24
TRAPPC6B-206ENST00000556765 PAGE2Q7Z2X7 111 aa13.57□□□□□ -0.24
TRAPPC6B-206ENST00000556765 TMPRSS9Q7Z410 1059 aa13.57□□□□□ -0.24
TRAPPC6B-206ENST00000556765 OR52E1Q8NGJ3 308 aa13.57□□□□□ -0.24
TRAPPC6B-206ENST00000556765 CHTF18Q8WVB6 975 aa13.57□□□□□ -0.24
TRAPPC6B-206ENST00000556765 SLC13A3Q8WWT9 602 aa13.57□□□□□ -0.24
TRAPPC6B-206ENST00000556765 MTFMTQ96DP5 389 aaKnown RBP13.57□□□□□ -0.24
TRAPPC6B-206ENST00000556765 C11orf24Q96F05 449 aaPredicted RBP13.57□□□□□ -0.24
TRAPPC6B-206ENST00000556765 ANKRD27Q96NW4 1050 aa13.57□□□□□ -0.24
TRAPPC6B-206ENST00000556765 QRFPRQ96P65 431 aa13.57□□□□□ -0.24
TRAPPC6B-206ENST00000556765 PRPF18Q99633 342 aaKnown RBP13.57□□□□□ -0.24
TRAPPC6B-206ENST00000556765 SARGQ9BW04 601 aa13.57□□□□□ -0.24
TRAPPC6B-206ENST00000556765 ACTL8Q9H568 366 aa13.57□□□□□ -0.24
TRAPPC6B-206ENST00000556765 DMRT3Q9NQL9 472 aa13.57□□□□□ -0.24
TRAPPC6B-206ENST00000556765 TMEM184CQ9NVA4 438 aa13.57□□□□□ -0.24
TRAPPC6B-206ENST00000556765 ADA2Q9NZK5 511 aa13.57□□□□□ -0.24
TRAPPC6B-206ENST00000556765 STX18Q9P2W9 335 aaKnown RBP13.57□□□□□ -0.24
TRAPPC6B-206ENST00000556765 TAC3Q9UHF0 121 aa13.57□□□□□ -0.24
TRAPPC6B-206ENST00000556765 DOLKQ9UPQ8 538 aa13.57□□□□□ -0.24
TRAPPC6B-206ENST00000556765 RNF215Q9Y6U7 377 aa13.57□□□□□ -0.24
TRAPPC6B-206ENST00000556765 A0A1W2PPV9 198 aa13.56□□□□□ -0.24
TRAPPC6B-206ENST00000556765 KRT87PA6NCN2 255 aa13.56□□□□□ -0.24
TRAPPC6B-206ENST00000556765 A6NCN8 305 aa13.56□□□□□ -0.24
TRAPPC6B-206ENST00000556765 EFCAB7A8K855 629 aa13.56□□□□□ -0.24
TRAPPC6B-206ENST00000556765 A8MUI8 341 aa13.56□□□□□ -0.24
TRAPPC6B-206ENST00000556765 MAGEB17A8MXT2 336 aa13.56□□□□□ -0.24
TRAPPC6B-206ENST00000556765 CAPN5O15484 640 aaPredicted RBP13.56□□□□□ -0.24
TRAPPC6B-206ENST00000556765 DUX1O43812 170 aa13.56□□□□□ -0.24
TRAPPC6B-206ENST00000556765 ERN1O75460 977 aaKnown RBP13.56□□□□□ -0.24
TRAPPC6B-206ENST00000556765 BCAS2O75934 225 aaPredicted RBP13.56□□□□□ -0.24
TRAPPC6B-206ENST00000556765 PGRP06401 933 aa13.56□□□□□ -0.24
TRAPPC6B-206ENST00000556765 CELA2BP08218 269 aaPredicted RBP13.56□□□□□ -0.24
TRAPPC6B-206ENST00000556765 CDH1P12830 882 aa13.56□□□□□ -0.24
TRAPPC6B-206ENST00000556765 SDC1P18827 310 aa13.56□□□□□ -0.24
TRAPPC6B-206ENST00000556765 XRCC1P18887 633 aaPredicted RBP13.56□□□□□ -0.24
TRAPPC6B-206ENST00000556765 TIA1P31483 386 aaKnown RBP eCLIP13.56□□□□□ -0.24
TRAPPC6B-206ENST00000556765 HPCAL1P37235 193 aa13.56□□□□□ -0.24
TRAPPC6B-206ENST00000556765 NEK2P51955 445 aa13.56□□□□□ -0.24
TRAPPC6B-206ENST00000556765 NME5P56597 212 aa13.56□□□□□ -0.24
TRAPPC6B-206ENST00000556765 EEFSECP57772 596 aaKnown RBP13.56□□□□□ -0.24
TRAPPC6B-206ENST00000556765 CDC20Q12834 499 aa13.56□□□□□ -0.24
TRAPPC6B-206ENST00000556765 PWP1Q13610 501 aa13.56□□□□□ -0.24
TRAPPC6B-206ENST00000556765 FLOT2Q14254 428 aa13.56□□□□□ -0.24
TRAPPC6B-206ENST00000556765 TRIM25Q14258 630 aaKnown RBP13.56□□□□□ -0.24
TRAPPC6B-206ENST00000556765 KIR2DS3Q14952 304 aa13.56□□□□□ -0.24
TRAPPC6B-206ENST00000556765 C16orf72Q14CZ0 275 aa13.56□□□□□ -0.24
TRAPPC6B-206ENST00000556765 MAPKAPK3Q16644 382 aa13.56□□□□□ -0.24
TRAPPC6B-206ENST00000556765 DEFB109BQ30KR1 87 aa13.56□□□□□ -0.24
TRAPPC6B-206ENST00000556765 TIGD2Q4W5G0 525 aa13.56□□□□□ -0.24
TRAPPC6B-206ENST00000556765 CATSPEREQ5SY80 951 aa13.56□□□□□ -0.24
TRAPPC6B-206ENST00000556765 IRAK1BP1Q5VVH5 260 aa13.56□□□□□ -0.24
TRAPPC6B-206ENST00000556765 IKBIPQ70UQ0 350 aa13.56□□□□□ -0.24
TRAPPC6B-206ENST00000556765 R3HCC1LQ7Z5L2 792 aaKnown RBP13.56□□□□□ -0.24
TRAPPC6B-206ENST00000556765 CAMKMTQ7Z624 323 aa13.56□□□□□ -0.24
TRAPPC6B-206ENST00000556765 DHDDSQ86SQ9 333 aa13.56□□□□□ -0.24
TRAPPC6B-206ENST00000556765 RETREG3Q86VR2 466 aa13.56□□□□□ -0.24
TRAPPC6B-206ENST00000556765 HID1Q8IV36 788 aa13.56□□□□□ -0.24
TRAPPC6B-206ENST00000556765 SLITRK4Q8IW52 837 aa13.56□□□□□ -0.24
TRAPPC6B-206ENST00000556765 NATD1Q8N6N6 113 aa13.56□□□□□ -0.24
TRAPPC6B-206ENST00000556765 Q8N9G6 341 aaPredicted RBP13.56□□□□□ -0.24
TRAPPC6B-206ENST00000556765 VPS37AQ8NEZ2 397 aa13.56□□□□□ -0.24
TRAPPC6B-206ENST00000556765 TNIP2Q8NFZ5 429 aa13.56□□□□□ -0.24
TRAPPC6B-206ENST00000556765 OR8J3Q8NGG0 315 aa13.56□□□□□ -0.24
TRAPPC6B-206ENST00000556765 MTERF3Q96E29 417 aa13.56□□□□□ -0.24
TRAPPC6B-206ENST00000556765 SLC45A3Q96JT2 553 aa13.56□□□□□ -0.24
TRAPPC6B-206ENST00000556765 IL17FQ96PD4 163 aa13.56□□□□□ -0.24
TRAPPC6B-206ENST00000556765 MTERF1Q99551 399 aaKnown RBP13.56□□□□□ -0.24
TRAPPC6B-206ENST00000556765 PRM3Q9NNZ6 103 aa13.56□□□□□ -0.24
TRAPPC6B-206ENST00000556765 FAM120CQ9NX05 1096 aaKnown RBP13.56□□□□□ -0.24
TRAPPC6B-206ENST00000556765 MAP10Q9P2G4 905 aa13.56□□□□□ -0.24
TRAPPC6B-206ENST00000556765 PNMA8BQ9ULN7 279 aaPredicted RBP13.56□□□□□ -0.24
TRAPPC6B-206ENST00000556765 L3MBTL1Q9Y468 752 aa13.56□□□□□ -0.24
TRAPPC6B-206ENST00000556765 CFAP20Q9Y6A4 193 aaKnown RBP13.56□□□□□ -0.24
TRAPPC6B-206ENST00000556765 TRBC2A0A5B9 178 aa13.55□□□□□ -0.24
TRAPPC6B-206ENST00000556765 TTLL8A6PVC2 850 aa13.55□□□□□ -0.24
TRAPPC6B-206ENST00000556765 ENTPD5O75356 428 aa13.55□□□□□ -0.24
TRAPPC6B-206ENST00000556765 CCL4P13236 92 aa13.55□□□□□ -0.24
TRAPPC6B-206ENST00000556765 IL12AP29459 219 aa13.55□□□□□ -0.24
TRAPPC6B-206ENST00000556765 S100A3P33764 101 aa13.55□□□□□ -0.24
TRAPPC6B-206ENST00000556765 GCKP35557 465 aa13.55□□□□□ -0.24
TRAPPC6B-206ENST00000556765 ZNF763Q0D2J5 394 aa13.55□□□□□ -0.24
TRAPPC6B-206ENST00000556765 DDX39BQ13838 428 aaKnown RBP13.55□□□□□ -0.24
TRAPPC6B-206ENST00000556765 GPR180Q86V85 440 aa13.55□□□□□ -0.24
TRAPPC6B-206ENST00000556765 PACS2Q86VP3 889 aa13.55□□□□□ -0.24
TRAPPC6B-206ENST00000556765 AMIGO1Q86WK6 493 aa13.55□□□□□ -0.24
TRAPPC6B-206ENST00000556765 HPS6Q86YV9 775 aa13.55□□□□□ -0.24
TRAPPC6B-206ENST00000556765 TRIM48Q8IWZ4 208 aa13.55□□□□□ -0.24
TRAPPC6B-206ENST00000556765 RIMKLAQ8IXN7 391 aa13.55□□□□□ -0.24
TRAPPC6B-206ENST00000556765 METTL4Q8N3J2 472 aa13.55□□□□□ -0.24
TRAPPC6B-206ENST00000556765 OR6C4Q8NGE1 309 aa13.55□□□□□ -0.24
TRAPPC6B-206ENST00000556765 OR8J2Q8NGG1 315 aa13.55□□□□□ -0.24
TRAPPC6B-206ENST00000556765 CPT1CQ8TCG5 803 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms