RNA–Protein interactions for RNA: ENST00000556682.5

XRCC3-216, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-216ENST00000556682 SETDB1Q15047 1291 aa10.1□□□□□ -0.79
XRCC3-216ENST00000556682 PRAMEF9Q5VWM5 478 aa10.1□□□□□ -0.79
XRCC3-216ENST00000556682 GRHL2Q6ISB3 625 aa10.1□□□□□ -0.79
XRCC3-216ENST00000556682 SLC25A25Q6KCM7 469 aa10.1□□□□□ -0.79
XRCC3-216ENST00000556682 GFRALQ6UXV0 394 aa10.1□□□□□ -0.79
XRCC3-216ENST00000556682 VN1R5Q7Z5H4 357 aa10.1□□□□□ -0.79
XRCC3-216ENST00000556682 SCUBE1Q8IWY4 988 aa10.1□□□□□ -0.79
XRCC3-216ENST00000556682 CENPLQ8N0S6 344 aaPredicted RBP10.1□□□□□ -0.79
XRCC3-216ENST00000556682 TEX9Q8N6V9 391 aa10.1□□□□□ -0.79
XRCC3-216ENST00000556682 AMER2Q8N7J2 671 aa10.1□□□□□ -0.79
XRCC3-216ENST00000556682 CEP112Q8N8E3 955 aa10.1□□□□□ -0.79
XRCC3-216ENST00000556682 NOA1Q8NC60 698 aaKnown RBP10.1□□□□□ -0.79
XRCC3-216ENST00000556682 OR7G3Q8NG95 312 aa10.1□□□□□ -0.79
XRCC3-216ENST00000556682 ZNF473Q8WTR7 871 aaKnown RBP10.1□□□□□ -0.79
XRCC3-216ENST00000556682 SLC44A1Q8WWI5 657 aa10.1□□□□□ -0.79
XRCC3-216ENST00000556682 DAZLQ92904 295 aaKnown RBP10.1□□□□□ -0.79
XRCC3-216ENST00000556682 TRIM44Q96DX7 344 aaPredicted RBP10.1□□□□□ -0.79
XRCC3-216ENST00000556682 VMP1Q96GC9 406 aa10.1□□□□□ -0.79
XRCC3-216ENST00000556682 CCDC77Q9BR77 488 aa10.1□□□□□ -0.79
XRCC3-216ENST00000556682 MS4A8Q9BY19 250 aa10.1□□□□□ -0.79
XRCC3-216ENST00000556682 VPS11Q9H270 941 aa10.1□□□□□ -0.79
XRCC3-216ENST00000556682 CDC42EP4Q9H3Q1 356 aaKnown RBP10.1□□□□□ -0.79
XRCC3-216ENST00000556682 ACTR8Q9H981 624 aa10.1□□□□□ -0.79
XRCC3-216ENST00000556682 ADAP2Q9NPF8 381 aa10.1□□□□□ -0.79
XRCC3-216ENST00000556682 PRDM7Q9NQW5 492 aa10.1□□□□□ -0.79
XRCC3-216ENST00000556682 ANKRD10Q9NXR5 420 aa10.1□□□□□ -0.79
XRCC3-216ENST00000556682 LRFN1Q9P244 771 aa10.1□□□□□ -0.79
XRCC3-216ENST00000556682 FBXW2Q9UKT8 454 aa10.1□□□□□ -0.79
XRCC3-216ENST00000556682 CLCA3PQ9Y6N3 262 aa10.1□□□□□ -0.79
XRCC3-216ENST00000556682 A0A087WUV0 522 aaPredicted RBP10.09□□□□□ -0.79
XRCC3-216ENST00000556682 HMX2A2RU54 273 aa10.09□□□□□ -0.79
XRCC3-216ENST00000556682 POC1B-GALNT4F8VUJ3 575 aa10.09□□□□□ -0.79
XRCC3-216ENST00000556682 CYR61O00622 381 aa10.09□□□□□ -0.79
XRCC3-216ENST00000556682 KLK8O60259 260 aa10.09□□□□□ -0.79
XRCC3-216ENST00000556682 ZFAND5O76080 213 aa10.09□□□□□ -0.79
XRCC3-216ENST00000556682 TBX6O95947 436 aaPredicted RBP10.09□□□□□ -0.79
XRCC3-216ENST00000556682 TGFB1P01137 390 aa10.09□□□□□ -0.79
XRCC3-216ENST00000556682 ALDOAP04075 364 aaKnown RBP10.09□□□□□ -0.79
XRCC3-216ENST00000556682 STSP08842 583 aa10.09□□□□□ -0.79
XRCC3-216ENST00000556682 COL6A2P12110 1019 aa10.09□□□□□ -0.79
XRCC3-216ENST00000556682 HIST1H1TP22492 207 aaPredicted RBP10.09□□□□□ -0.79
XRCC3-216ENST00000556682 ATP5A1P25705 553 aaKnown RBP10.09□□□□□ -0.79
XRCC3-216ENST00000556682 PTX3P26022 381 aaPredicted RBP10.09□□□□□ -0.79
XRCC3-216ENST00000556682 TLX1P31314 330 aaPredicted RBP10.09□□□□□ -0.79
XRCC3-216ENST00000556682 SSR2P43308 183 aa10.09□□□□□ -0.79
XRCC3-216ENST00000556682 RAP1GDS1P52306 607 aa10.09□□□□□ -0.79
XRCC3-216ENST00000556682 ARFIP1P53367 373 aa10.09□□□□□ -0.79
XRCC3-216ENST00000556682 CASP6P55212 293 aa10.09□□□□□ -0.79
XRCC3-216ENST00000556682 MLF1P58340 268 aa10.09□□□□□ -0.79
XRCC3-216ENST00000556682 BIKQ13323 160 aa10.09□□□□□ -0.79
XRCC3-216ENST00000556682 PCBP2Q15366 365 aaKnown RBP eCLIP10.09□□□□□ -0.79
XRCC3-216ENST00000556682 ELAVL1Q15717 326 aaKnown RBP10.09□□□□□ -0.79
XRCC3-216ENST00000556682 TSNAXIP1Q2TAA8 658 aa10.09□□□□□ -0.79
XRCC3-216ENST00000556682 KRTCAP3Q53RY4 240 aa10.09□□□□□ -0.79
XRCC3-216ENST00000556682 DEPDC1Q5TB30 811 aa10.09□□□□□ -0.79
XRCC3-216ENST00000556682 KHDRBS2Q5VWX1 349 aaKnown RBP10.09□□□□□ -0.79
XRCC3-216ENST00000556682 SPINK14Q6IE38 97 aa10.09□□□□□ -0.79
XRCC3-216ENST00000556682 IFT20Q8IY31 132 aa10.09□□□□□ -0.79
XRCC3-216ENST00000556682 CNPY4Q8N129 248 aa10.09□□□□□ -0.79
XRCC3-216ENST00000556682 KIF2BQ8N4N8 673 aa10.09□□□□□ -0.79
XRCC3-216ENST00000556682 TMEM156Q8N614 296 aa10.09□□□□□ -0.79
XRCC3-216ENST00000556682 ACOT4Q8N9L9 421 aa10.09□□□□□ -0.79
XRCC3-216ENST00000556682 FAM47BQ8NA70 645 aa10.09□□□□□ -0.79
XRCC3-216ENST00000556682 MDS2Q8NDY4 140 aa10.09□□□□□ -0.79
XRCC3-216ENST00000556682 NFAM1Q8NET5 270 aaPredicted RBP10.09□□□□□ -0.79
XRCC3-216ENST00000556682 ATP6V1E2Q96A05 226 aa10.09□□□□□ -0.79
XRCC3-216ENST00000556682 RGMAQ96B86 450 aa10.09□□□□□ -0.79
XRCC3-216ENST00000556682 SCMH1Q96GD3 660 aa10.09□□□□□ -0.79
XRCC3-216ENST00000556682 SIGLEC12Q96PQ1 595 aa10.09□□□□□ -0.79
XRCC3-216ENST00000556682 PAFAH2Q99487 392 aa10.09□□□□□ -0.79
XRCC3-216ENST00000556682 NPAS2Q99743 824 aa10.09□□□□□ -0.79
XRCC3-216ENST00000556682 ALOXE3Q9BYJ1 711 aa10.09□□□□□ -0.79
XRCC3-216ENST00000556682 KLHL1Q9NR64 748 aa10.09□□□□□ -0.79
XRCC3-216ENST00000556682 MS4A12Q9NXJ0 267 aa10.09□□□□□ -0.79
XRCC3-216ENST00000556682 CPSF2Q9P2I0 782 aaKnown RBP10.09□□□□□ -0.79
XRCC3-216ENST00000556682 SEC14L3Q9UDX4 400 aa10.09□□□□□ -0.79
XRCC3-216ENST00000556682 PPIEQ9UNP9 301 aaKnown RBP10.09□□□□□ -0.79
XRCC3-216ENST00000556682 TSC22D4Q9Y3Q8 395 aa10.09□□□□□ -0.79
XRCC3-216ENST00000556682 ASB1Q9Y576 335 aa10.09□□□□□ -0.79
XRCC3-216ENST00000556682 DOPEY2Q9Y3R5 2298 aa10.09□□□□□ -0.79
XRCC3-216ENST00000556682 TRBV11-1A0A0K0K1C0 115 aa10.08□□□□□ -0.8
XRCC3-216ENST00000556682 H0YIV9 168 aa10.08□□□□□ -0.8
XRCC3-216ENST00000556682 DYRK3O43781 588 aa10.08□□□□□ -0.8
XRCC3-216ENST00000556682 MAN1A2O60476 641 aa10.08□□□□□ -0.8
XRCC3-216ENST00000556682 SMIM24O75264 130 aa10.08□□□□□ -0.8
XRCC3-216ENST00000556682 SLC25A12O75746 678 aa10.08□□□□□ -0.8
XRCC3-216ENST00000556682 UNC5CO95185 931 aa10.08□□□□□ -0.8
XRCC3-216ENST00000556682 SP1P08047 785 aa10.08□□□□□ -0.8
XRCC3-216ENST00000556682 TNNI3P19429 210 aa10.08□□□□□ -0.8
XRCC3-216ENST00000556682 CPN2P22792 545 aa10.08□□□□□ -0.8
XRCC3-216ENST00000556682 TPP2P29144 1249 aaPredicted RBP10.08□□□□□ -0.8
XRCC3-216ENST00000556682 TRHRP34981 398 aaPredicted RBP10.08□□□□□ -0.8
XRCC3-216ENST00000556682 ARL1P40616 181 aaPredicted RBP10.08□□□□□ -0.8
XRCC3-216ENST00000556682 HLCSP50747 726 aa10.08□□□□□ -0.8
XRCC3-216ENST00000556682 TDGF1P3P51864 188 aa10.08□□□□□ -0.8
XRCC3-216ENST00000556682 ALDH6A1Q02252 535 aaKnown RBP10.08□□□□□ -0.8
XRCC3-216ENST00000556682 DDX39BQ13838 428 aaKnown RBP10.08□□□□□ -0.8
XRCC3-216ENST00000556682 GTF2H2Q13888 395 aa10.08□□□□□ -0.8
XRCC3-216ENST00000556682 MAPKAPK3Q16644 382 aa10.08□□□□□ -0.8
XRCC3-216ENST00000556682 OR4C11Q6IEV9 310 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms