RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 GSTA2P09210 222 aa21.06■□□□□ 0.96
ACTN1-220ENST00000556433 AGAP20933 346 aa21.06■□□□□ 0.96
ACTN1-220ENST00000556433 CERS1P27544 350 aa21.06■□□□□ 0.96
ACTN1-220ENST00000556433 SPRP35270 261 aaPredicted RBP21.06■□□□□ 0.96
ACTN1-220ENST00000556433 GPR143P51810 404 aa21.06■□□□□ 0.96
ACTN1-220ENST00000556433 GPX6P59796 221 aa21.06■□□□□ 0.96
ACTN1-220ENST00000556433 RAB10P61026 200 aa21.06■□□□□ 0.96
ACTN1-220ENST00000556433 TGM3Q08188 693 aa21.06■□□□□ 0.96
ACTN1-220ENST00000556433 LAPTM5Q13571 262 aa21.06■□□□□ 0.96
ACTN1-220ENST00000556433 BMPR2Q13873 1038 aa21.06■□□□□ 0.96
ACTN1-220ENST00000556433 RCN2Q14257 317 aa21.06■□□□□ 0.96
ACTN1-220ENST00000556433 ZKSCAN8Q15776 578 aaPredicted RBP21.06■□□□□ 0.96
ACTN1-220ENST00000556433 GRTP1Q5TC63 336 aa21.06■□□□□ 0.96
ACTN1-220ENST00000556433 CYP4Z2PQ8N1L4 340 aa21.06■□□□□ 0.96
ACTN1-220ENST00000556433 PDPRQ8NCN5 879 aa21.06■□□□□ 0.96
ACTN1-220ENST00000556433 EXT2Q93063 718 aa21.06■□□□□ 0.96
ACTN1-220ENST00000556433 PRM3Q9NNZ6 103 aa21.06■□□□□ 0.96
ACTN1-220ENST00000556433 ADAP2Q9NPF8 381 aa21.06■□□□□ 0.96
ACTN1-220ENST00000556433 PRDM7Q9NQW5 492 aa21.06■□□□□ 0.96
ACTN1-220ENST00000556433 DAPP1Q9UN19 280 aa21.06■□□□□ 0.96
ACTN1-220ENST00000556433 GTF3C1Q12789 2109 aa21.05■□□□□ 0.96
ACTN1-220ENST00000556433 PEX1O43933 1283 aa21.05■□□□□ 0.96
ACTN1-220ENST00000556433 CTNSO60931 367 aa21.05■□□□□ 0.96
ACTN1-220ENST00000556433 IFNA16P05015 189 aa21.05■□□□□ 0.96
ACTN1-220ENST00000556433 COX6B1P14854 86 aa21.05■□□□□ 0.96
ACTN1-220ENST00000556433 CD22P20273 847 aa21.05■□□□□ 0.96
ACTN1-220ENST00000556433 RFC3P40938 356 aa21.05■□□□□ 0.96
ACTN1-220ENST00000556433 KCNC1P48547 511 aa21.05■□□□□ 0.96
ACTN1-220ENST00000556433 IRF8Q02556 426 aa21.05■□□□□ 0.96
ACTN1-220ENST00000556433 C2orf54Q08AI8 447 aa21.05■□□□□ 0.96
ACTN1-220ENST00000556433 CHIT1Q13231 466 aa21.05■□□□□ 0.96
ACTN1-220ENST00000556433 PAGE2BQ5JRK9 111 aa21.05■□□□□ 0.96
ACTN1-220ENST00000556433 DOLPP1Q86YN1 238 aa21.05■□□□□ 0.96
ACTN1-220ENST00000556433 CHERPQ8IWX8 916 aaKnown RBP21.05■□□□□ 0.96
ACTN1-220ENST00000556433 TMEM132CQ8N3T6 1108 aa21.05■□□□□ 0.96
ACTN1-220ENST00000556433 PPM1NQ8N819 430 aa21.05■□□□□ 0.96
ACTN1-220ENST00000556433 AGAP11Q8TF27 550 aa21.05■□□□□ 0.96
ACTN1-220ENST00000556433 PHF12Q96QT6 1004 aa21.05■□□□□ 0.96
ACTN1-220ENST00000556433 CSF3RQ99062 836 aa21.05■□□□□ 0.96
ACTN1-220ENST00000556433 CD244Q9BZW8 370 aa21.05■□□□□ 0.96
ACTN1-220ENST00000556433 YARS2Q9Y2Z4 477 aaKnown RBP21.05■□□□□ 0.96
ACTN1-220ENST00000556433 ASB1Q9Y576 335 aa21.05■□□□□ 0.96
ACTN1-220ENST00000556433 MYOCOSA0A1B0GUC4 107 aa21.04■□□□□ 0.96
ACTN1-220ENST00000556433 PRRG2O14669 202 aa21.04■□□□□ 0.96
ACTN1-220ENST00000556433 TFECO14948 347 aaPredicted RBP21.04■□□□□ 0.96
ACTN1-220ENST00000556433 PRKNO60260 465 aaPredicted RBP21.04■□□□□ 0.96
ACTN1-220ENST00000556433 FAM155BO75949 473 aa21.04■□□□□ 0.96
ACTN1-220ENST00000556433 C1QAP02745 245 aa21.04■□□□□ 0.96
ACTN1-220ENST00000556433 PTGER1P34995 402 aa21.04■□□□□ 0.96
ACTN1-220ENST00000556433 GMPRP36959 345 aa21.04■□□□□ 0.96
ACTN1-220ENST00000556433 SSR4P51571 173 aa21.04■□□□□ 0.96
ACTN1-220ENST00000556433 PLTPP55058 493 aa21.04■□□□□ 0.96
ACTN1-220ENST00000556433 EFTUD2Q15029 972 aaKnown RBP eCLIP21.04■□□□□ 0.963e-6■■■■□ 22
ACTN1-220ENST00000556433 ELAVL1Q15717 326 aaKnown RBP21.04■□□□□ 0.96
ACTN1-220ENST00000556433 C16orf47Q6ZP98 133 aaPredicted RBP21.04■□□□□ 0.96
ACTN1-220ENST00000556433 NCCRP1Q6ZVX7 275 aaPredicted RBP21.04■□□□□ 0.96
ACTN1-220ENST00000556433 RAPH1Q70E73 1250 aa21.04■□□□□ 0.96
ACTN1-220ENST00000556433 MDGA2Q7Z553 956 aa21.04■□□□□ 0.96
ACTN1-220ENST00000556433 FGD2Q7Z6J4 655 aa21.04■□□□□ 0.96
ACTN1-220ENST00000556433 STAG3L4Q8TBR4 150 aa21.04■□□□□ 0.96
ACTN1-220ENST00000556433 ALOXE3Q9BYJ1 711 aa21.04■□□□□ 0.96
ACTN1-220ENST00000556433 ALG9Q9H6U8 611 aa21.04■□□□□ 0.96
ACTN1-220ENST00000556433 LIN28AQ9H9Z2 209 aaKnown RBP21.04■□□□□ 0.96
ACTN1-220ENST00000556433 CLCA3PQ9Y6N3 262 aa21.04■□□□□ 0.96
ACTN1-220ENST00000556433 SYNDIG1LA6NDD5 238 aa21.03■□□□□ 0.96
ACTN1-220ENST00000556433 EPORP19235 508 aa21.03■□□□□ 0.96
ACTN1-220ENST00000556433 TFEBP19484 476 aa21.03■□□□□ 0.96
ACTN1-220ENST00000556433 MSH2P43246 934 aa21.03■□□□□ 0.96
ACTN1-220ENST00000556433 STX4Q12846 297 aa21.03■□□□□ 0.96
ACTN1-220ENST00000556433 TBCCQ15814 346 aa21.03■□□□□ 0.96
ACTN1-220ENST00000556433 KBTBD12Q3ZCT8 623 aa21.03■□□□□ 0.96
ACTN1-220ENST00000556433 C3P1Q6ZMU1 363 aa21.03■□□□□ 0.96
ACTN1-220ENST00000556433 LRRC70Q7Z2Q7 622 aa21.03■□□□□ 0.96
ACTN1-220ENST00000556433 UBE3DQ7Z6J8 389 aa21.03■□□□□ 0.96
ACTN1-220ENST00000556433 ISCA2Q86U28 154 aa21.03■□□□□ 0.96
ACTN1-220ENST00000556433 CCDC25Q86WR0 208 aa21.03■□□□□ 0.96
ACTN1-220ENST00000556433 SRFBP1Q8NEF9 429 aaKnown RBP21.03■□□□□ 0.96
ACTN1-220ENST00000556433 KCNC2Q96PR1 638 aa21.03■□□□□ 0.96
ACTN1-220ENST00000556433 ROGDIQ9GZN7 287 aa21.03■□□□□ 0.96
ACTN1-220ENST00000556433 TIMMDC1Q9NPL8 285 aa21.03■□□□□ 0.96
ACTN1-220ENST00000556433 KCMF1Q9P0J7 381 aa21.03■□□□□ 0.96
ACTN1-220ENST00000556433 ERVK-11Q9UQG0 969 aa21.03■□□□□ 0.96
ACTN1-220ENST00000556433 UTP11Q9Y3A2 253 aaKnown RBP21.03■□□□□ 0.96
ACTN1-220ENST00000556433 PKDREJQ9NTG1 2253 aa21.03■□□□□ 0.96
ACTN1-220ENST00000556433 HS6ST1O60243 411 aa21.02■□□□□ 0.96
ACTN1-220ENST00000556433 CLDN14O95500 239 aa21.02■□□□□ 0.96
ACTN1-220ENST00000556433 TNNI3P19429 210 aa21.02■□□□□ 0.96
ACTN1-220ENST00000556433 PTGS2P35354 604 aa21.02■□□□□ 0.96
ACTN1-220ENST00000556433 PTGER4P35408 488 aa21.02■□□□□ 0.96
ACTN1-220ENST00000556433 CASP2P42575 452 aa21.02■□□□□ 0.96
ACTN1-220ENST00000556433 GPR85P60893 370 aa21.02■□□□□ 0.96
ACTN1-220ENST00000556433 CAV1Q03135 178 aa21.02■□□□□ 0.96
ACTN1-220ENST00000556433 DLG1Q12959 904 aa21.02■□□□□ 0.96
ACTN1-220ENST00000556433 SLMAPQ14BN4 828 aa21.02■□□□□ 0.96
ACTN1-220ENST00000556433 CDSNQ15517 529 aa21.02■□□□□ 0.96
ACTN1-220ENST00000556433 CMC1Q7Z7K0 106 aa21.02■□□□□ 0.96
ACTN1-220ENST00000556433 C16orf52Q8NHV5 167 aa21.02■□□□□ 0.96
ACTN1-220ENST00000556433 ZNF473Q8WTR7 871 aaKnown RBP21.02■□□□□ 0.96
ACTN1-220ENST00000556433 PTPMT1Q8WUK0 201 aaPredicted RBP21.02■□□□□ 0.96
ACTN1-220ENST00000556433 SREK1Q8WXA9 508 aaKnown RBP21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms