RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 C8GP07360 202 aa12.88□□□□□ -0.35
ACTN1-219ENST00000556432 SAT1P21673 171 aa12.88□□□□□ -0.35
ACTN1-219ENST00000556432 RGS4P49798 205 aa12.88□□□□□ -0.35
ACTN1-219ENST00000556432 GPR143P51810 404 aa12.88□□□□□ -0.35
ACTN1-219ENST00000556432 TBX2Q13207 712 aaPredicted RBP12.88□□□□□ -0.35
ACTN1-219ENST00000556432 CTBP1Q13363 440 aa12.88□□□□□ -0.35
ACTN1-219ENST00000556432 TOR1AIP1Q5JTV8 583 aa12.88□□□□□ -0.35
ACTN1-219ENST00000556432 MAATS1Q7Z4T9 603 aa12.88□□□□□ -0.35
ACTN1-219ENST00000556432 STRA8Q7Z7C7 330 aa12.88□□□□□ -0.35
ACTN1-219ENST00000556432 CLNKQ7Z7G1 428 aa12.88□□□□□ -0.35
ACTN1-219ENST00000556432 KIAA1328Q86T90 577 aa12.88□□□□□ -0.35
ACTN1-219ENST00000556432 DENND6AQ8IWF6 608 aa12.88□□□□□ -0.35
ACTN1-219ENST00000556432 ULK2Q8IYT8 1036 aa12.88□□□□□ -0.35
ACTN1-219ENST00000556432 CA13Q8N1Q1 262 aa12.88□□□□□ -0.35
ACTN1-219ENST00000556432 CIARTQ8N365 385 aaPredicted RBP12.88□□□□□ -0.35
ACTN1-219ENST00000556432 LIX1Q8N485 282 aa12.88□□□□□ -0.35
ACTN1-219ENST00000556432 NAXEQ8NCW5 288 aa12.88□□□□□ -0.35
ACTN1-219ENST00000556432 TNIP2Q8NFZ5 429 aa12.88□□□□□ -0.35
ACTN1-219ENST00000556432 SNF8Q96H20 258 aa12.88□□□□□ -0.35
ACTN1-219ENST00000556432 FAR2Q96K12 515 aa12.88□□□□□ -0.35
ACTN1-219ENST00000556432 TSNARE1Q96NA8 513 aa12.88□□□□□ -0.35
ACTN1-219ENST00000556432 LACRTQ9GZZ8 138 aa12.88□□□□□ -0.35
ACTN1-219ENST00000556432 PARVBQ9HBI1 364 aa12.88□□□□□ -0.35
ACTN1-219ENST00000556432 ADAP2Q9NPF8 381 aa12.88□□□□□ -0.35
ACTN1-219ENST00000556432 TRMT6Q9UJA5 497 aaKnown RBP12.88□□□□□ -0.35
ACTN1-219ENST00000556432 MED16Q9Y2X0 877 aa12.88□□□□□ -0.35
ACTN1-219ENST00000556432 EPN1Q9Y6I3 576 aaPredicted RBP12.88□□□□□ -0.35
ACTN1-219ENST00000556432 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.88□□□□□ -0.35
ACTN1-219ENST00000556432 INAFM1C9JVW0 142 aa12.87□□□□□ -0.35
ACTN1-219ENST00000556432 NRDCO43847 1150 aa12.87□□□□□ -0.35
ACTN1-219ENST00000556432 SMPD2O60906 423 aa12.87□□□□□ -0.35
ACTN1-219ENST00000556432 HIST1H2AGP0C0S8 130 aaPredicted RBP12.87□□□□□ -0.35
ACTN1-219ENST00000556432 CCL3P10147 92 aa12.87□□□□□ -0.35
ACTN1-219ENST00000556432 HIST1H2ADP20671 130 aa12.87□□□□□ -0.35
ACTN1-219ENST00000556432 ENDOUP21128 410 aaKnown RBP12.87□□□□□ -0.35
ACTN1-219ENST00000556432 SCTRP47872 440 aa12.87□□□□□ -0.35
ACTN1-219ENST00000556432 TRPC1P48995 793 aa12.87□□□□□ -0.35
ACTN1-219ENST00000556432 HK2P52789 917 aa12.87□□□□□ -0.35
ACTN1-219ENST00000556432 WNT3P56703 355 aa12.87□□□□□ -0.35
ACTN1-219ENST00000556432 KCNJ2P63252 427 aa12.87□□□□□ -0.35
ACTN1-219ENST00000556432 BTN3A2P78410 334 aa12.87□□□□□ -0.35
ACTN1-219ENST00000556432 CCZ1BP86790 482 aa12.87□□□□□ -0.35
ACTN1-219ENST00000556432 CCZ1P86791 482 aaPredicted RBP12.87□□□□□ -0.35
ACTN1-219ENST00000556432 FOXO1Q12778 655 aa12.87□□□□□ -0.35
ACTN1-219ENST00000556432 SP140Q13342 867 aa12.87□□□□□ -0.35
ACTN1-219ENST00000556432 CSHL1Q14406 222 aa12.87□□□□□ -0.35
ACTN1-219ENST00000556432 RBBP5Q15291 538 aaKnown RBP12.87□□□□□ -0.35
ACTN1-219ENST00000556432 FBXL19-AS1Q494R0 122 aa12.87□□□□□ -0.35
ACTN1-219ENST00000556432 CATSPEREQ5SY80 951 aa12.87□□□□□ -0.35
ACTN1-219ENST00000556432 LRRC8EQ6NSJ5 796 aa12.87□□□□□ -0.35
ACTN1-219ENST00000556432 ZNF549Q6P9A3 640 aa12.87□□□□□ -0.35
ACTN1-219ENST00000556432 GSTA5Q7RTV2 222 aa12.87□□□□□ -0.35
ACTN1-219ENST00000556432 SCUBE1Q8IWY4 988 aa12.87□□□□□ -0.35
ACTN1-219ENST00000556432 MYO1HQ8N1T3 1032 aa12.87□□□□□ -0.35
ACTN1-219ENST00000556432 TMEM132CQ8N3T6 1108 aa12.87□□□□□ -0.35
ACTN1-219ENST00000556432 FAM47BQ8NA70 645 aa12.87□□□□□ -0.35
ACTN1-219ENST00000556432 GOLM1Q8NBJ4 401 aa12.87□□□□□ -0.35
ACTN1-219ENST00000556432 SIMC1Q8NDZ2 872 aa12.87□□□□□ -0.35
ACTN1-219ENST00000556432 EEF1AKMT1Q8WVE0 214 aa12.87□□□□□ -0.35
ACTN1-219ENST00000556432 HIST1H2AHQ96KK5 128 aa12.87□□□□□ -0.35
ACTN1-219ENST00000556432 SGCZQ96LD1 299 aa12.87□□□□□ -0.35
ACTN1-219ENST00000556432 Q96MF0 132 aa12.87□□□□□ -0.35
ACTN1-219ENST00000556432 HIST1H2AJQ99878 128 aa12.87□□□□□ -0.35
ACTN1-219ENST00000556432 H2AFJQ9BTM1 129 aa12.87□□□□□ -0.35
ACTN1-219ENST00000556432 OR8D2Q9GZM6 311 aa12.87□□□□□ -0.35
ACTN1-219ENST00000556432 SLC6A15Q9H2J7 730 aa12.87□□□□□ -0.35
ACTN1-219ENST00000556432 KLHL31Q9H511 634 aa12.87□□□□□ -0.35
ACTN1-219ENST00000556432 SEMA4BQ9NPR2 832 aaPredicted RBP12.87□□□□□ -0.35
ACTN1-219ENST00000556432 ARL15Q9NXU5 204 aa12.87□□□□□ -0.35
ACTN1-219ENST00000556432 PPIEQ9UNP9 301 aaKnown RBP12.87□□□□□ -0.35
ACTN1-219ENST00000556432 C15orf38-AP3S2A0A0A6YYH1 394 aa12.86□□□□□ -0.35
ACTN1-219ENST00000556432 A0A0G2JN53 185 aa12.86□□□□□ -0.35
ACTN1-219ENST00000556432 MYOCOSA0A1B0GUC4 107 aa12.86□□□□□ -0.35
ACTN1-219ENST00000556432 TGFBR3LH3BV60 316 aa12.86□□□□□ -0.35
ACTN1-219ENST00000556432 CES2O00748 559 aa12.86□□□□□ -0.35
ACTN1-219ENST00000556432 IL2RAP01589 272 aa12.86□□□□□ -0.35
ACTN1-219ENST00000556432 AHRP35869 848 aa12.86□□□□□ -0.35
ACTN1-219ENST00000556432 PIGAP37287 484 aa12.86□□□□□ -0.35
ACTN1-219ENST00000556432 DHX34Q14147 1143 aaKnown RBP12.86□□□□□ -0.35
ACTN1-219ENST00000556432 ELAVL1Q15717 326 aaKnown RBP12.86□□□□□ -0.35
ACTN1-219ENST00000556432 HYAL4Q2M3T9 481 aa12.86□□□□□ -0.35
ACTN1-219ENST00000556432 OPN5Q6U736 354 aa12.86□□□□□ -0.35
ACTN1-219ENST00000556432 SEM1Q6ZVN7 128 aa12.86□□□□□ -0.35
ACTN1-219ENST00000556432 TRPV3Q8NET8 790 aa12.86□□□□□ -0.35
ACTN1-219ENST00000556432 OR4K1Q8NGD4 311 aa12.86□□□□□ -0.35
ACTN1-219ENST00000556432 SLC5A11Q8WWX8 675 aa12.86□□□□□ -0.35
ACTN1-219ENST00000556432 ZNF592Q92610 1267 aa12.86□□□□□ -0.35
ACTN1-219ENST00000556432 KIAA1191Q96A73 305 aa12.86□□□□□ -0.35
ACTN1-219ENST00000556432 ZNF669Q96BR6 464 aaPredicted RBP12.86□□□□□ -0.35
ACTN1-219ENST00000556432 JSRP1Q96MG2 331 aaPredicted RBP12.86□□□□□ -0.35
ACTN1-219ENST00000556432 SPNS1Q9H2V7 528 aa12.86□□□□□ -0.35
ACTN1-219ENST00000556432 ZNF629Q9UEG4 869 aaPredicted RBP12.86□□□□□ -0.35
ACTN1-219ENST00000556432 BOKQ9UMX3 212 aaPredicted RBP12.86□□□□□ -0.35
ACTN1-219ENST00000556432 MRPS33Q9Y291 106 aaKnown RBP12.86□□□□□ -0.35
ACTN1-219ENST00000556432 ATG4BQ9Y4P1 393 aa12.86□□□□□ -0.35
ACTN1-219ENST00000556432 COMMD10Q9Y6G5 202 aa12.86□□□□□ -0.35
ACTN1-219ENST00000556432 ARID1AO14497 2285 aa12.86□□□□□ -0.35
ACTN1-219ENST00000556432 ARHGAP21Q5T5U3 1957 aa12.85□□□□□ -0.35
ACTN1-219ENST00000556432 EML6Q6ZMW3 1958 aa12.85□□□□□ -0.35
ACTN1-219ENST00000556432 FBN1P35555 2871 aaKnown RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms